| ATG9A | Q7Z3C6 | TCL6_2.1-201 | ENST00000615162 | 119 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | KTN1-203 | ENST00000395309 | 4021 nt | APPRIS ALT2 TSL 5 BASIC | 2.19 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | ST7-AS2-206 | ENST00000456577 | 1351 nt | TSL 1 (best) BASIC | 2.19 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | AC006026.1-201 | ENST00000444025 | 1803 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | FAR1-204 | ENST00000532502 | 5820 nt | TSL 2 BASIC | 2.18 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | Y_RNA.252-201 | ENST00000364556 | 101 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | SNORA16B-201 | ENST00000364674 | 135 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | RNU1-115P-201 | ENST00000365329 | 160 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | RNU4-52P-201 | ENST00000384209 | 138 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | Y_RNA.463-201 | ENST00000384271 | 102 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | MIR559-201 | ENST00000385188 | 96 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | SNORA69.1-201 | ENST00000390904 | 137 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | RNU1-139P-201 | ENST00000391307 | 165 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | MRLN-201 | ENST00000414264 | 422 nt | APPRIS P2 TSL 1 (best) BASIC | 2.18 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | AL356124.2-201 | ENST00000442449 | 391 nt | TSL 5 BASIC | 2.18 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | AL035666.1-201 | ENST00000446195 | 348 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | AL591504.1-201 | ENST00000450681 | 414 nt | TSL 3 BASIC | 2.18 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | Y_RNA.639-201 | ENST00000458981 | 102 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | RPS23P5-201 | ENST00000495419 | 428 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | AC096721.1-201 | ENST00000513540 | 552 nt | TSL 4 BASIC | 2.18 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | RNU5F-4P-201 | ENST00000516581 | 114 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | RNU6-58P-201 | ENST00000517143 | 103 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | AC103794.1-201 | ENST00000531763 | 197 nt | TSL 3 BASIC | 2.18 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | AC090617.3-201 | ENST00000573670 | 475 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | SMARCAD1-201 | ENST00000354268 | 4912 nt | APPRIS P3 TSL 1 (best) BASIC | 2.18 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | MDM2-206 | ENST00000350057 | 1401 nt | TSL 1 (best) BASIC | 2.17 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | RNU6-1115P-201 | ENST00000362490 | 106 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | RNU6-944P-201 | ENST00000364023 | 107 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | Y_RNA.314-201 | ENST00000365114 | 102 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | Y_RNA.395-201 | ENST00000383945 | 109 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | RNU6-159P-201 | ENST00000391080 | 106 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | SNORA17.3-201 | ENST00000391159 | 129 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | RNA5SP489-201 | ENST00000410986 | 109 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | AC092813.2-201 | ENST00000434540 | 399 nt | TSL 3 BASIC | 2.17 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | LINC01564-201 | ENST00000448327 | 566 nt | TSL 3 BASIC | 2.17 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | RNU7-87P-201 | ENST00000459343 | 62 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | AC055731.1-201 | ENST00000474387 | 401 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | LINC02276-201 | ENST00000508388 | 138 nt | TSL 3 BASIC | 2.17 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | CYCSP23-201 | ENST00000519781 | 313 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | AC007450.1-201 | ENST00000536492 | 188 nt | TSL 3 BASIC | 2.17 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | AC027288.2-201 | ENST00000553028 | 243 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | MIR4529-201 | ENST00000578110 | 78 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | MIR3935-201 | ENST00000583472 | 104 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | ABCA9-AS1-203 | ENST00000627596 | 426 nt | TSL 5 BASIC | 2.17 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | CSNK1G3-202 | ENST00000360683 | 4047 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.17 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | ZNF204P-201 | ENST00000416749 | 2397 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | CENPCP1-201 | ENST00000533085 | 2578 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | AC008555.8-201 | ENST00000623602 | 2168 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | FSIP2-206 | ENST00000611759 | 3882 nt | APPRIS ALT2 TSL 5 BASIC | 2.16 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | RNU1-62P-201 | ENST00000362599 | 164 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | Y_RNA.39-201 | ENST00000362620 | 98 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | RNU1-76P-201 | ENST00000362903 | 159 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | Y_RNA.106-201 | ENST00000363189 | 100 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | Y_RNA.112-201 | ENST00000363250 | 102 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | Y_RNA.128-201 | ENST00000363391 | 112 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | RNU6-234P-201 | ENST00000365229 | 104 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | SNORA25B-201 | ENST00000365507 | 128 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | Y_RNA.419-201 | ENST00000384041 | 102 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | Y_RNA.445-201 | ENST00000384168 | 102 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | RNU6-1026P-201 | ENST00000384465 | 108 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | MIR628-201 | ENST00000385229 | 95 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | SNORA12-201 | ENST00000391162 | 147 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | SUMO2P12-201 | ENST00000405924 | 140 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | Y_RNA.605-201 | ENST00000410577 | 105 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | AC114482.1-201 | ENST00000418010 | 247 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | EHHADH-202 | ENST00000440662 | 656 nt | TSL 3 BASIC | 2.16 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | AC009237.7-201 | ENST00000447357 | 229 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | AC074290.1-201 | ENST00000448883 | 135 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | AC245102.2-201 | ENST00000448956 | 180 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | LINC01337-201 | ENST00000515871 | 440 nt | TSL 3 BASIC | 2.16 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | RNU6-911P-201 | ENST00000516523 | 104 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | RNU6-699P-201 | ENST00000517081 | 110 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | RNU2-19P-201 | ENST00000517288 | 84 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | CBX3P7-201 | ENST00000532876 | 502 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | MIR4419B-201 | ENST00000577260 | 68 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | AC026271.5-201 | ENST00000577873 | 130 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | MIR4287-201 | ENST00000579398 | 78 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | AP006219.1-201 | ENST00000580258 | 472 nt | TSL 3 BASIC | 2.16 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | AP000942.3-201 | ENST00000603702 | 160 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | AC016727.2-201 | ENST00000603988 | 621 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | AL355512.1-202 | ENST00000607952 | 209 nt | TSL 5 BASIC | 2.16 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | LINC01206-214 | ENST00000610910 | 456 nt | TSL 5 BASIC | 2.16 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | AL627230.6-201 | ENST00000611129 | 280 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | AC134503.1-201 | ENST00000633048 | 54 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | ZBBX-205 | ENST00000455345 | 3185 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.16 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | AC008163.1-205 | ENST00000413944 | 4649 nt | TSL 1 (best) BASIC | 2.16 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | KIF20B-202 | ENST00000371728 | 6419 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.16 | □□□□□ -2.06 | | |
| ATG9A | Q7Z3C6 | ATF1-201 | ENST00000262053 | 2181 nt | APPRIS P1 TSL 1 (best) BASIC | 2.15 | □□□□□ -2.07 | | |
| ATG9A | Q7Z3C6 | SAGE1-202 | ENST00000370709 | 2879 nt | APPRIS P2 TSL 5 BASIC | 2.15 | □□□□□ -2.07 | | |
| ATG9A | Q7Z3C6 | MIER3-202 | ENST00000381199 | 5188 nt | APPRIS ALT1 TSL 1 (best) BASIC | 2.15 | □□□□□ -2.07 | | |
| ATG9A | Q7Z3C6 | MTND5P16-201 | ENST00000460269 | 1703 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| ATG9A | Q7Z3C6 | RNU1-23P-201 | ENST00000363361 | 144 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| ATG9A | Q7Z3C6 | SNORD42.2-201 | ENST00000365570 | 69 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| ATG9A | Q7Z3C6 | MIR300-201 | ENST00000401138 | 83 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| ATG9A | Q7Z3C6 | MIR1302-11-201 | ENST00000408051 | 138 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| ATG9A | Q7Z3C6 | MIR1302-9-201 | ENST00000408365 | 138 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| ATG9A | Q7Z3C6 | MIR1302-10-201 | ENST00000408734 | 138 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| ATG9A | Q7Z3C6 | MTCO3P19-201 | ENST00000415864 | 321 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| ATG9A | Q7Z3C6 | MTCO2P12-201 | ENST00000427426 | 682 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| ATG9A | Q7Z3C6 | Y_RNA.631-201 | ENST00000459607 | 101 nt | BASIC | 2.15 | □□□□□ -2.07 | | |