Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC007098.1-201ENST00000420122 367 ntBASIC1.89□□□□□ -2.11
NUP54Q7Z3B4 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.89□□□□□ -2.11
NUP54Q7Z3B4 USP9YP16-201ENST00000430287 407 ntBASIC1.89□□□□□ -2.11
NUP54Q7Z3B4 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
NUP54Q7Z3B4 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.89□□□□□ -2.11
NUP54Q7Z3B4 USP9YP23-201ENST00000455085 407 ntBASIC1.89□□□□□ -2.11
NUP54Q7Z3B4 Y_RNA.653-201ENST00000459091 95 ntBASIC1.89□□□□□ -2.11
NUP54Q7Z3B4 HMGN2P9-201ENST00000476875 229 ntBASIC1.89□□□□□ -2.11
NUP54Q7Z3B4 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.89□□□□□ -2.11
NUP54Q7Z3B4 RNU6-1114P-201ENST00000516022 107 ntBASIC1.89□□□□□ -2.11
NUP54Q7Z3B4 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.89□□□□□ -2.11
NUP54Q7Z3B4 AC004584.2-201ENST00000570407 410 ntBASIC1.89□□□□□ -2.11
NUP54Q7Z3B4 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.89□□□□□ -2.11
NUP54Q7Z3B4 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
NUP54Q7Z3B4 Y_RNA.529-201ENST00000384586 119 ntBASIC1.88□□□□□ -2.11
NUP54Q7Z3B4 RPL31P63-201ENST00000422565 375 ntBASIC1.88□□□□□ -2.11
NUP54Q7Z3B4 AC074290.1-201ENST00000448883 135 ntBASIC1.88□□□□□ -2.11
NUP54Q7Z3B4 AL021397.1-201ENST00000451806 248 ntBASIC1.88□□□□□ -2.11
NUP54Q7Z3B4 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.88□□□□□ -2.11
NUP54Q7Z3B4 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.88□□□□□ -2.11
NUP54Q7Z3B4 SUB1P3-201ENST00000564581 315 ntBASIC1.88□□□□□ -2.11
NUP54Q7Z3B4 AL355375.2-201ENST00000574825 175 ntBASIC1.88□□□□□ -2.11
NUP54Q7Z3B4 AC005786.1-201ENST00000588553 154 ntBASIC1.88□□□□□ -2.11
NUP54Q7Z3B4 MTND4P1-201ENST00000457501 1466 ntBASIC1.88□□□□□ -2.11
NUP54Q7Z3B4 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.88□□□□□ -2.11
NUP54Q7Z3B4 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
NUP54Q7Z3B4 RNU6-1305P-201ENST00000364353 104 ntBASIC1.87□□□□□ -2.11
NUP54Q7Z3B4 Y_RNA.259-201ENST00000364619 101 ntBASIC1.87□□□□□ -2.11
NUP54Q7Z3B4 Y_RNA.356-201ENST00000365475 113 ntBASIC1.87□□□□□ -2.11
NUP54Q7Z3B4 RNU6-975P-201ENST00000384296 105 ntBASIC1.87□□□□□ -2.11
NUP54Q7Z3B4 RNA5SP213-201ENST00000391031 106 ntBASIC1.87□□□□□ -2.11
NUP54Q7Z3B4 MIR934-201ENST00000401241 83 ntBASIC1.87□□□□□ -2.11
NUP54Q7Z3B4 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.87□□□□□ -2.11
NUP54Q7Z3B4 OOSP1P1-201ENST00000423265 274 ntBASIC1.87□□□□□ -2.11
NUP54Q7Z3B4 AL445305.1-201ENST00000432577 575 ntBASIC1.87□□□□□ -2.11
NUP54Q7Z3B4 MTND5P16-201ENST00000460269 1703 ntBASIC1.87□□□□□ -2.11
NUP54Q7Z3B4 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
NUP54Q7Z3B4 RNU6-948P-201ENST00000516374 107 ntBASIC1.87□□□□□ -2.11
NUP54Q7Z3B4 RNU6-264P-201ENST00000517134 104 ntBASIC1.87□□□□□ -2.11
NUP54Q7Z3B4 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.87□□□□□ -2.11
NUP54Q7Z3B4 AC090617.3-201ENST00000573670 475 ntBASIC1.87□□□□□ -2.11
NUP54Q7Z3B4 LARP7P1-201ENST00000605576 316 ntBASIC1.87□□□□□ -2.11
NUP54Q7Z3B4 AC103810.8-201ENST00000607347 118 ntBASIC1.87□□□□□ -2.11
NUP54Q7Z3B4 AL008636.1-201ENST00000625038 1018 ntBASIC1.87□□□□□ -2.11
NUP54Q7Z3B4 AC068205.3-201ENST00000636385 468 ntBASIC1.87□□□□□ -2.11
NUP54Q7Z3B4 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
NUP54Q7Z3B4 RNU6-874P-201ENST00000362390 105 ntBASIC1.86□□□□□ -2.11
NUP54Q7Z3B4 RNU6-222P-201ENST00000362438 107 ntBASIC1.86□□□□□ -2.11
NUP54Q7Z3B4 RNU6-418P-201ENST00000384035 107 ntBASIC1.86□□□□□ -2.11
NUP54Q7Z3B4 RNU6-890P-201ENST00000384121 107 ntBASIC1.86□□□□□ -2.11
NUP54Q7Z3B4 RNU6-281P-201ENST00000384212 103 ntBASIC1.86□□□□□ -2.11
NUP54Q7Z3B4 RNU6-793P-201ENST00000384233 104 ntBASIC1.86□□□□□ -2.11
NUP54Q7Z3B4 SNORD116-29-201ENST00000384516 83 ntBASIC1.86□□□□□ -2.11
NUP54Q7Z3B4 RNU6-1235P-201ENST00000384559 107 ntBASIC1.86□□□□□ -2.11
NUP54Q7Z3B4 MIR30A-201ENST00000385092 71 ntBASIC1.86□□□□□ -2.11
NUP54Q7Z3B4 RNY4P36-201ENST00000391116 96 ntBASIC1.86□□□□□ -2.11
NUP54Q7Z3B4 RNA5SP504-201ENST00000410676 117 ntBASIC1.86□□□□□ -2.11
NUP54Q7Z3B4 RNU6-1304P-201ENST00000411374 106 ntBASIC1.86□□□□□ -2.11
NUP54Q7Z3B4 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.86□□□□□ -2.11
NUP54Q7Z3B4 AC092423.1-201ENST00000430165 186 ntBASIC1.86□□□□□ -2.11
NUP54Q7Z3B4 MTCO3P10-201ENST00000455912 772 ntBASIC1.86□□□□□ -2.11
NUP54Q7Z3B4 ELOCP24-201ENST00000456370 334 ntBASIC1.86□□□□□ -2.11
NUP54Q7Z3B4 RPL30P15-201ENST00000457129 321 ntBASIC1.86□□□□□ -2.11
NUP54Q7Z3B4 RNU6-498P-201ENST00000459468 107 ntBASIC1.86□□□□□ -2.11
NUP54Q7Z3B4 AC091179.3-201ENST00000474761 144 ntBASIC1.86□□□□□ -2.11
NUP54Q7Z3B4 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.86□□□□□ -2.11
NUP54Q7Z3B4 RNU6-856P-201ENST00000516959 98 ntBASIC1.86□□□□□ -2.11
NUP54Q7Z3B4 Y_RNA.718-201ENST00000517110 102 ntBASIC1.86□□□□□ -2.11
NUP54Q7Z3B4 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.86□□□□□ -2.11
NUP54Q7Z3B4 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.86□□□□□ -2.11
NUP54Q7Z3B4 MIR5695-201ENST00000579717 85 ntBASIC1.86□□□□□ -2.11
NUP54Q7Z3B4 AC010900.2-201ENST00000604508 210 ntBASIC1.86□□□□□ -2.11
NUP54Q7Z3B4 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.86□□□□□ -2.11
NUP54Q7Z3B4 AC010999.1-201ENST00000611856 324 ntBASIC1.86□□□□□ -2.11
NUP54Q7Z3B4 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.86□□□□□ -2.11
NUP54Q7Z3B4 Y_RNA.783-201ENST00000613546 102 ntBASIC1.86□□□□□ -2.11
NUP54Q7Z3B4 Y_RNA.804-201ENST00000615262 101 ntBASIC1.86□□□□□ -2.11
NUP54Q7Z3B4 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.86□□□□□ -2.11
NUP54Q7Z3B4 uc_338.20-201ENST00000621563 178 ntBASIC1.86□□□□□ -2.11
NUP54Q7Z3B4 AL078596.1-201ENST00000624856 447 ntBASIC1.86□□□□□ -2.11
NUP54Q7Z3B4 MTND4LP32-201ENST00000636111 270 ntBASIC1.86□□□□□ -2.11
NUP54Q7Z3B4 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.85□□□□□ -2.11
NUP54Q7Z3B4 Y_RNA.179-201ENST00000363844 90 ntBASIC1.85□□□□□ -2.11
NUP54Q7Z3B4 Y_RNA.577-201ENST00000384794 101 ntBASIC1.85□□□□□ -2.11
NUP54Q7Z3B4 MT-TD-201ENST00000387419 68 ntBASIC1.85□□□□□ -2.11
NUP54Q7Z3B4 MTCO2P27-201ENST00000420740 428 ntBASIC1.85□□□□□ -2.11
NUP54Q7Z3B4 EIF1P2-201ENST00000428233 350 ntBASIC1.85□□□□□ -2.11
NUP54Q7Z3B4 UBE2V1P7-201ENST00000446395 340 ntBASIC1.85□□□□□ -2.11
NUP54Q7Z3B4 NDUFB4P10-201ENST00000452541 359 ntBASIC1.85□□□□□ -2.11
NUP54Q7Z3B4 RNU6-717P-201ENST00000459076 104 ntBASIC1.85□□□□□ -2.11
NUP54Q7Z3B4 Y_RNA.632-201ENST00000459189 102 ntBASIC1.85□□□□□ -2.11
NUP54Q7Z3B4 YWHAEP4-201ENST00000505390 198 ntBASIC1.85□□□□□ -2.11
NUP54Q7Z3B4 AC022493.2-201ENST00000506122 481 ntBASIC1.85□□□□□ -2.11
NUP54Q7Z3B4 RNU6-470P-201ENST00000515954 104 ntBASIC1.85□□□□□ -2.11
NUP54Q7Z3B4 RNU1-117P-201ENST00000517041 158 ntBASIC1.85□□□□□ -2.11
NUP54Q7Z3B4 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.85□□□□□ -2.11
NUP54Q7Z3B4 WWP1P1-201ENST00000466609 2769 ntBASIC1.85□□□□□ -2.11
NUP54Q7Z3B4 AL159152.1-201ENST00000635019 2587 ntBASIC1.85□□□□□ -2.11
NUP54Q7Z3B4 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
NUP54Q7Z3B4 AL356292.1-201ENST00000283110 373 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 560 ms