Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 MIR527-201ENST00000385244 85 ntBASIC-1.22□□□□□ -2.61
VPS13CQ709C8 MTCO2P7-201ENST00000446518 666 ntBASIC-1.22□□□□□ -2.61
VPS13CQ709C8 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-1.22□□□□□ -2.61
VPS13CQ709C8 AC090049.2-201ENST00000550377 109 ntBASIC-1.22□□□□□ -2.61
VPS13CQ709C8 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-1.22□□□□□ -2.61
VPS13CQ709C8 MIR548Y-201ENST00000582739 110 ntBASIC-1.22□□□□□ -2.61
VPS13CQ709C8 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.23□□□□□ -2.61
VPS13CQ709C8 RNU6-534P-201ENST00000364877 106 ntBASIC-1.23□□□□□ -2.61
VPS13CQ709C8 RNU6-1304P-201ENST00000411374 106 ntBASIC-1.23□□□□□ -2.61
VPS13CQ709C8 AL356583.2-201ENST00000426536 280 ntBASIC-1.23□□□□□ -2.61
VPS13CQ709C8 RNU6-977P-201ENST00000516411 103 ntBASIC-1.23□□□□□ -2.61
VPS13CQ709C8 AL451064.1-201ENST00000607718 471 ntBASIC-1.23□□□□□ -2.61
VPS13CQ709C8 AC092104.1-201ENST00000497346 1441 ntBASIC-1.23□□□□□ -2.61
VPS13CQ709C8 RNU6-228P-201ENST00000362700 106 ntBASIC-1.23□□□□□ -2.61
VPS13CQ709C8 Y_RNA.436-201ENST00000384097 102 ntBASIC-1.23□□□□□ -2.61
VPS13CQ709C8 RNU6-1274P-201ENST00000384557 107 ntBASIC-1.23□□□□□ -2.61
VPS13CQ709C8 MIR8485-201ENST00000401372 91 ntBASIC-1.23□□□□□ -2.61
VPS13CQ709C8 MIR3925-201ENST00000584674 77 ntBASIC-1.23□□□□□ -2.61
VPS13CQ709C8 Y_RNA.1-201ENST00000352915 104 ntBASIC-1.23□□□□□ -2.61
VPS13CQ709C8 MIR548K-201ENST00000408406 116 ntBASIC-1.23□□□□□ -2.61
VPS13CQ709C8 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC-1.23□□□□□ -2.61
VPS13CQ709C8 AL627311.1-201ENST00000431514 115 ntBASIC-1.23□□□□□ -2.61
VPS13CQ709C8 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-1.23□□□□□ -2.61
VPS13CQ709C8 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC-1.23□□□□□ -2.61
VPS13CQ709C8 AL359999.1-201ENST00000604513 294 ntBASIC-1.23□□□□□ -2.61
VPS13CQ709C8 AC134878.1-201ENST00000619901 243 ntBASIC-1.23□□□□□ -2.61
VPS13CQ709C8 AL513423.1-201ENST00000621695 132 ntBASIC-1.23□□□□□ -2.61
VPS13CQ709C8 FCF1P10-201ENST00000407590 479 ntBASIC-1.24□□□□□ -2.61
VPS13CQ709C8 AC079382.1-201ENST00000493346 557 ntBASIC-1.24□□□□□ -2.61
VPS13CQ709C8 RNU2-53P-201ENST00000516257 147 ntBASIC-1.24□□□□□ -2.61
VPS13CQ709C8 AC026616.1-201ENST00000523157 525 ntBASIC-1.24□□□□□ -2.61
VPS13CQ709C8 FRG1KP-201ENST00000623592 341 ntBASIC-1.24□□□□□ -2.61
VPS13CQ709C8 U8.6-201ENST00000364939 135 ntBASIC-1.24□□□□□ -2.61
VPS13CQ709C8 RNU6-901P-201ENST00000384593 106 ntBASIC-1.24□□□□□ -2.61
VPS13CQ709C8 RPS23P5-201ENST00000495419 428 ntBASIC-1.24□□□□□ -2.61
VPS13CQ709C8 RNU6-730P-201ENST00000383954 104 ntBASIC-1.24□□□□□ -2.61
VPS13CQ709C8 MIR802-201ENST00000390235 94 ntBASIC-1.24□□□□□ -2.61
VPS13CQ709C8 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC-1.24□□□□□ -2.61
VPS13CQ709C8 POLR2KP2-201ENST00000438155 177 ntBASIC-1.25□□□□□ -2.61
VPS13CQ709C8 MTATP6P30-201ENST00000443540 664 ntBASIC-1.25□□□□□ -2.61
VPS13CQ709C8 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-1.25□□□□□ -2.61
VPS13CQ709C8 AC113347.3-201ENST00000509113 148 ntBASIC-1.25□□□□□ -2.61
VPS13CQ709C8 MTCO3P28-201ENST00000513351 515 ntBASIC-1.25□□□□□ -2.61
VPS13CQ709C8 AL445584.3-201ENST00000617173 78 ntBASIC-1.25□□□□□ -2.61
VPS13CQ709C8 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC-1.25□□□□□ -2.61
VPS13CQ709C8 SNORA2B-201ENST00000384583 137 ntBASIC-1.25□□□□□ -2.61
VPS13CQ709C8 AL031779.1-201ENST00000415663 330 ntBASIC-1.25□□□□□ -2.61
VPS13CQ709C8 HSPE1P23-201ENST00000509838 286 ntBASIC-1.25□□□□□ -2.61
VPS13CQ709C8 RNU6-504P-201ENST00000516568 104 ntBASIC-1.25□□□□□ -2.61
VPS13CQ709C8 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-1.25□□□□□ -2.61
VPS13CQ709C8 AGGF1P4-201ENST00000568249 801 ntBASIC-1.25□□□□□ -2.61
VPS13CQ709C8 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-1.25□□□□□ -2.61
VPS13CQ709C8 RNU6-702P-201ENST00000364982 107 ntBASIC-1.25□□□□□ -2.61
VPS13CQ709C8 RNU6-438P-201ENST00000365561 103 ntBASIC-1.25□□□□□ -2.61
VPS13CQ709C8 Y_RNA.477-201ENST00000384352 108 ntBASIC-1.25□□□□□ -2.61
VPS13CQ709C8 SNORD100-201ENST00000408573 76 ntBASIC-1.25□□□□□ -2.61
VPS13CQ709C8 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-1.25□□□□□ -2.61
VPS13CQ709C8 AL031667.1-201ENST00000440222 725 ntBASIC-1.25□□□□□ -2.61
VPS13CQ709C8 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC-1.25□□□□□ -2.61
VPS13CQ709C8 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC-1.25□□□□□ -2.61
VPS13CQ709C8 AC006600.1-201ENST00000572529 153 ntBASIC-1.25□□□□□ -2.61
VPS13CQ709C8 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-1.25□□□□□ -2.61
VPS13CQ709C8 AC005332.6-201ENST00000613178 446 ntBASIC-1.25□□□□□ -2.61
VPS13CQ709C8 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC-1.25□□□□□ -2.61
VPS13CQ709C8 MIR501-201ENST00000390204 84 ntBASIC-1.26□□□□□ -2.61
VPS13CQ709C8 AL117339.3-201ENST00000418733 162 ntBASIC-1.26□□□□□ -2.61
VPS13CQ709C8 ERLEC1P1-201ENST00000433806 578 ntBASIC-1.26□□□□□ -2.61
VPS13CQ709C8 AL360271.2-201ENST00000447710 161 ntBASIC-1.26□□□□□ -2.61
VPS13CQ709C8 MIR4280-201ENST00000582178 76 ntBASIC-1.26□□□□□ -2.61
VPS13CQ709C8 AC107952.2-201ENST00000606048 486 ntBASIC-1.26□□□□□ -2.61
VPS13CQ709C8 AC131235.4-201ENST00000609288 620 ntBASIC-1.26□□□□□ -2.61
VPS13CQ709C8 AC005562.2-201ENST00000618264 111 ntBASIC-1.26□□□□□ -2.61
VPS13CQ709C8 RNU5E-9P-201ENST00000411164 104 ntBASIC-1.26□□□□□ -2.61
VPS13CQ709C8 RNU6-1232P-201ENST00000516299 86 ntBASIC-1.26□□□□□ -2.61
VPS13CQ709C8 MIR4504-201ENST00000577413 92 ntBASIC-1.26□□□□□ -2.61
VPS13CQ709C8 MIR7107-201ENST00000611489 80 ntBASIC-1.26□□□□□ -2.61
VPS13CQ709C8 AC084368.1-201ENST00000620935 65 ntBASIC-1.26□□□□□ -2.61
VPS13CQ709C8 MIR382-201ENST00000637119 76 ntBASIC-1.26□□□□□ -2.61
VPS13CQ709C8 Y_RNA.529-201ENST00000384586 119 ntBASIC-1.26□□□□□ -2.61
VPS13CQ709C8 MIR487A-201ENST00000385009 80 ntBASIC-1.26□□□□□ -2.61
VPS13CQ709C8 AC007000.2-201ENST00000442564 487 ntBASIC-1.26□□□□□ -2.61
VPS13CQ709C8 MTND2P33-201ENST00000506452 1031 ntBASIC-1.26□□□□□ -2.61
VPS13CQ709C8 Y_RNA.666-201ENST00000516187 112 ntBASIC-1.26□□□□□ -2.61
VPS13CQ709C8 MIR3136-201ENST00000583498 78 ntBASIC-1.26□□□□□ -2.61
VPS13CQ709C8 RNU6-576P-201ENST00000390854 102 ntBASIC-1.27□□□□□ -2.61
VPS13CQ709C8 ELOCP14-201ENST00000428070 331 ntBASIC-1.27□□□□□ -2.61
VPS13CQ709C8 ELOCP7-201ENST00000439968 331 ntBASIC-1.27□□□□□ -2.61
VPS13CQ709C8 AC022137.1-201ENST00000483735 151 ntBASIC-1.27□□□□□ -2.61
VPS13CQ709C8 MIR6507-201ENST00000613630 70 ntBASIC-1.27□□□□□ -2.61
VPS13CQ709C8 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.27□□□□□ -2.61
VPS13CQ709C8 AL590135.1-201ENST00000422215 156 ntBASIC-1.27□□□□□ -2.61
VPS13CQ709C8 AC019205.3-201ENST00000424573 156 ntBASIC-1.27□□□□□ -2.61
VPS13CQ709C8 USP9YP14-201ENST00000430663 563 ntBASIC-1.27□□□□□ -2.61
VPS13CQ709C8 AC016700.2-201ENST00000446011 156 ntBASIC-1.27□□□□□ -2.61
VPS13CQ709C8 AC015911.1-201ENST00000495111 156 ntBASIC-1.27□□□□□ -2.61
VPS13CQ709C8 AC018448.1-201ENST00000552843 316 ntBASIC-1.27□□□□□ -2.61
VPS13CQ709C8 AC137800.2-201ENST00000574375 120 ntBASIC-1.27□□□□□ -2.61
VPS13CQ709C8 AC007684.1-201ENST00000609671 477 ntBASIC-1.27□□□□□ -2.61
VPS13CQ709C8 AC005609.4-201ENST00000625071 447 ntBASIC-1.27□□□□□ -2.61
VPS13CQ709C8 MIR517B-201ENST00000385102 67 ntBASIC-1.27□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms