Protein–RNA interactions for Protein: Q6SPF0

SAMD1, Atherin, humanhuman

Predicted RBP Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1Q6SPF0 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.74□□□□□ -1.49
SAMD1Q6SPF0 Xist_exon1.1-201ENST00000618930 85 ntBASIC5.74□□□□□ -1.49
SAMD1Q6SPF0 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SAMD1Q6SPF0 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SAMD1Q6SPF0 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
SAMD1Q6SPF0 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC5.74□□□□□ -1.49
SAMD1Q6SPF0 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
SAMD1Q6SPF0 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
SAMD1Q6SPF0 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC5.73□□□□□ -1.49
SAMD1Q6SPF0 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SAMD1Q6SPF0 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.73□□□□□ -1.49
SAMD1Q6SPF0 SNORD115-2-201ENST00000362842 82 ntBASIC5.73□□□□□ -1.49
SAMD1Q6SPF0 SNORD115-20-201ENST00000365099 82 ntBASIC5.73□□□□□ -1.49
SAMD1Q6SPF0 AC106707.2-201ENST00000484182 374 ntBASIC5.73□□□□□ -1.49
SAMD1Q6SPF0 RNA5SP112-201ENST00000515937 99 ntBASIC5.73□□□□□ -1.49
SAMD1Q6SPF0 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.73□□□□□ -1.49
SAMD1Q6SPF0 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.73□□□□□ -1.49
SAMD1Q6SPF0 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
SAMD1Q6SPF0 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SAMD1Q6SPF0 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SAMD1Q6SPF0 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
SAMD1Q6SPF0 Y_RNA.57-201ENST00000362806 113 ntBASIC5.72□□□□□ -1.49
SAMD1Q6SPF0 U8.5-201ENST00000364528 136 ntBASIC5.72□□□□□ -1.49
SAMD1Q6SPF0 AC009238.2-201ENST00000431026 355 ntBASIC5.72□□□□□ -1.49
SAMD1Q6SPF0 AL691482.1-201ENST00000453255 87 ntBASIC5.72□□□□□ -1.49
SAMD1Q6SPF0 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.72□□□□□ -1.49
SAMD1Q6SPF0 AC134698.5-201ENST00000519444 336 ntBASIC5.72□□□□□ -1.49
SAMD1Q6SPF0 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
SAMD1Q6SPF0 OTUD4P1-201ENST00000237841 3067 ntBASIC5.72□□□□□ -1.49
SAMD1Q6SPF0 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.71□□□□□ -1.49
SAMD1Q6SPF0 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
SAMD1Q6SPF0 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
SAMD1Q6SPF0 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
SAMD1Q6SPF0 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.71□□□□□ -1.5
SAMD1Q6SPF0 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SAMD1Q6SPF0 PTMAP2-201ENST00000397627 327 ntBASIC5.71□□□□□ -1.5
SAMD1Q6SPF0 COX6CP13-201ENST00000428703 226 ntBASIC5.71□□□□□ -1.5
SAMD1Q6SPF0 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC5.71□□□□□ -1.5
SAMD1Q6SPF0 RNU1-142P-201ENST00000516682 145 ntBASIC5.71□□□□□ -1.5
SAMD1Q6SPF0 IGHVIII-5-1-201ENST00000523059 99 ntBASIC5.71□□□□□ -1.5
SAMD1Q6SPF0 AC011266.1-201ENST00000624119 3569 ntBASIC5.71□□□□□ -1.5
SAMD1Q6SPF0 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SAMD1Q6SPF0 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.71□□□□□ -1.5
SAMD1Q6SPF0 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SAMD1Q6SPF0 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SAMD1Q6SPF0 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SAMD1Q6SPF0 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SAMD1Q6SPF0 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.7□□□□□ -1.5
SAMD1Q6SPF0 SNORD38.1-201ENST00000363863 68 ntBASIC5.7□□□□□ -1.5
SAMD1Q6SPF0 SNORA32-201ENST00000384072 121 ntBASIC5.7□□□□□ -1.5
SAMD1Q6SPF0 AC123900.1-201ENST00000420390 96 ntBASIC5.7□□□□□ -1.5
SAMD1Q6SPF0 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC5.7□□□□□ -1.5
SAMD1Q6SPF0 RPS29P9-201ENST00000440360 171 ntBASIC5.7□□□□□ -1.5
SAMD1Q6SPF0 RNU1-61P-201ENST00000516107 151 ntBASIC5.7□□□□□ -1.5
SAMD1Q6SPF0 AC090821.2-201ENST00000523552 176 ntBASIC5.7□□□□□ -1.5
SAMD1Q6SPF0 PARP1P2-201ENST00000556806 195 ntBASIC5.7□□□□□ -1.5
SAMD1Q6SPF0 AC002076.2-201ENST00000617362 122 ntBASIC5.7□□□□□ -1.5
SAMD1Q6SPF0 MIR6853-201ENST00000619642 74 ntBASIC5.7□□□□□ -1.5
SAMD1Q6SPF0 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.7□□□□□ -1.5
SAMD1Q6SPF0 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.7□□□□□ -1.5
SAMD1Q6SPF0 AC008163.1-202ENST00000636004 2889 ntBASIC5.7□□□□□ -1.5
SAMD1Q6SPF0 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC5.7□□□□□ -1.5
SAMD1Q6SPF0 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC5.7□□□□□ -1.5
SAMD1Q6SPF0 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.7□□□□□ -1.5
SAMD1Q6SPF0 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SAMD1Q6SPF0 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC5.69□□□□□ -1.5
SAMD1Q6SPF0 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SAMD1Q6SPF0 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.69□□□□□ -1.5
SAMD1Q6SPF0 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC5.69□□□□□ -1.5
SAMD1Q6SPF0 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.69□□□□□ -1.5
SAMD1Q6SPF0 RNU6-1244P-201ENST00000363614 108 ntBASIC5.69□□□□□ -1.5
SAMD1Q6SPF0 SNORA70.2-201ENST00000364506 135 ntBASIC5.69□□□□□ -1.5
SAMD1Q6SPF0 Y_RNA.494-201ENST00000384432 111 ntBASIC5.69□□□□□ -1.5
SAMD1Q6SPF0 RNA5SP332-201ENST00000391063 115 ntBASIC5.69□□□□□ -1.5
SAMD1Q6SPF0 MIR298-201ENST00000401212 88 ntBASIC5.69□□□□□ -1.5
SAMD1Q6SPF0 HMGN2P7-201ENST00000456186 273 ntBASIC5.69□□□□□ -1.5
SAMD1Q6SPF0 PHBP14-201ENST00000512887 367 ntBASIC5.69□□□□□ -1.5
SAMD1Q6SPF0 RN7SL176P-201ENST00000580352 264 ntBASIC5.69□□□□□ -1.5
SAMD1Q6SPF0 FAM27B-201ENST00000610601 213 ntBASIC5.69□□□□□ -1.5
SAMD1Q6SPF0 AL022401.1-201ENST00000619498 108 ntBASIC5.69□□□□□ -1.5
SAMD1Q6SPF0 U6.108-201ENST00000637764 58 ntBASIC5.69□□□□□ -1.5
SAMD1Q6SPF0 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
SAMD1Q6SPF0 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SAMD1Q6SPF0 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
SAMD1Q6SPF0 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SAMD1Q6SPF0 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
SAMD1Q6SPF0 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SAMD1Q6SPF0 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.68□□□□□ -1.5
SAMD1Q6SPF0 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC5.68□□□□□ -1.5
SAMD1Q6SPF0 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SAMD1Q6SPF0 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC5.68□□□□□ -1.5
SAMD1Q6SPF0 RNU6-478P-201ENST00000363904 110 ntBASIC5.68□□□□□ -1.5
SAMD1Q6SPF0 HSPE1P26-201ENST00000405341 275 ntBASIC5.68□□□□□ -1.5
SAMD1Q6SPF0 AL445685.2-201ENST00000422551 342 ntBASIC5.68□□□□□ -1.5
SAMD1Q6SPF0 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC5.68□□□□□ -1.5
SAMD1Q6SPF0 AL391358.1-201ENST00000605342 190 ntBASIC5.68□□□□□ -1.5
SAMD1Q6SPF0 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SAMD1Q6SPF0 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
SAMD1Q6SPF0 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SAMD1Q6SPF0 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms