Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC004386.2-201ENST00000441858 148 ntBASIC3.66□□□□□ -1.82
RNF43Q68DV7 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.66□□□□□ -1.82
RNF43Q68DV7 HMGN2P10-201ENST00000448085 265 ntBASIC3.66□□□□□ -1.82
RNF43Q68DV7 SNRPGP8-201ENST00000454064 226 ntBASIC3.66□□□□□ -1.82
RNF43Q68DV7 AC117454.1-201ENST00000491120 168 ntBASIC3.66□□□□□ -1.82
RNF43Q68DV7 AC078918.1-201ENST00000498515 228 ntBASIC3.66□□□□□ -1.82
RNF43Q68DV7 AC005921.1-201ENST00000510589 286 ntBASIC3.66□□□□□ -1.82
RNF43Q68DV7 ACA59.2-201ENST00000517061 156 ntBASIC3.66□□□□□ -1.82
RNF43Q68DV7 AC093331.1-201ENST00000521474 169 ntBASIC3.66□□□□□ -1.82
RNF43Q68DV7 AC025754.2-201ENST00000606491 432 ntBASIC3.66□□□□□ -1.82
RNF43Q68DV7 MIR7851-201ENST00000610611 160 ntBASIC3.66□□□□□ -1.82
RNF43Q68DV7 AC099778.2-201ENST00000610904 211 ntBASIC3.66□□□□□ -1.82
RNF43Q68DV7 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.66□□□□□ -1.82
RNF43Q68DV7 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.66□□□□□ -1.82
RNF43Q68DV7 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
RNF43Q68DV7 MFSD8-236ENST00000641509 4050 ntBASIC3.65□□□□□ -1.82
RNF43Q68DV7 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
RNF43Q68DV7 AC002543.1-201ENST00000299783 1954 ntBASIC3.65□□□□□ -1.82
RNF43Q68DV7 AL513302.2-201ENST00000562313 1842 ntBASIC3.65□□□□□ -1.82
RNF43Q68DV7 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RNF43Q68DV7 SNORA7.2-201ENST00000364446 145 ntBASIC3.65□□□□□ -1.83
RNF43Q68DV7 RNA5SP189-201ENST00000364920 115 ntBASIC3.65□□□□□ -1.83
RNF43Q68DV7 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.65□□□□□ -1.83
RNF43Q68DV7 RNA5SP293-201ENST00000410527 113 ntBASIC3.65□□□□□ -1.83
RNF43Q68DV7 MLLT10P1-201ENST00000418346 262 ntBASIC3.65□□□□□ -1.83
RNF43Q68DV7 TOMM22P2-201ENST00000430735 237 ntBASIC3.65□□□□□ -1.83
RNF43Q68DV7 SNRPGP5-201ENST00000456003 220 ntBASIC3.65□□□□□ -1.83
RNF43Q68DV7 U3.44-201ENST00000458938 192 ntBASIC3.65□□□□□ -1.83
RNF43Q68DV7 RPS29P24-201ENST00000486345 171 ntBASIC3.65□□□□□ -1.83
RNF43Q68DV7 RNU2-27P-201ENST00000516185 142 ntBASIC3.65□□□□□ -1.83
RNF43Q68DV7 RNU6-537P-201ENST00000517277 103 ntBASIC3.65□□□□□ -1.83
RNF43Q68DV7 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.65□□□□□ -1.83
RNF43Q68DV7 AC021739.1-201ENST00000559631 174 ntBASIC3.65□□□□□ -1.83
RNF43Q68DV7 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.65□□□□□ -1.83
RNF43Q68DV7 AC025281.1-201ENST00000567026 265 ntBASIC3.65□□□□□ -1.83
RNF43Q68DV7 MIR5047-201ENST00000579212 100 ntBASIC3.65□□□□□ -1.83
RNF43Q68DV7 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.65□□□□□ -1.83
RNF43Q68DV7 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.65□□□□□ -1.83
RNF43Q68DV7 TCL6_2.1-201ENST00000615162 119 ntBASIC3.65□□□□□ -1.83
RNF43Q68DV7 AC005562.2-201ENST00000618264 111 ntBASIC3.65□□□□□ -1.83
RNF43Q68DV7 AL121890.5-201ENST00000620848 304 ntBASIC3.65□□□□□ -1.83
RNF43Q68DV7 AP003355.3-201ENST00000623465 114 ntBASIC3.65□□□□□ -1.83
RNF43Q68DV7 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.65□□□□□ -1.83
RNF43Q68DV7 AC004944.1-201ENST00000517807 3059 ntBASIC3.65□□□□□ -1.83
RNF43Q68DV7 AL355596.1-201ENST00000565399 3996 ntBASIC3.65□□□□□ -1.83
RNF43Q68DV7 AC138915.1-201ENST00000565427 1685 ntBASIC3.65□□□□□ -1.83
RNF43Q68DV7 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RNF43Q68DV7 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
RNF43Q68DV7 SNORA36B-201ENST00000410438 131 ntBASIC3.64□□□□□ -1.83
RNF43Q68DV7 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.64□□□□□ -1.83
RNF43Q68DV7 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.64□□□□□ -1.83
RNF43Q68DV7 AL031737.1-201ENST00000450125 223 ntBASIC3.64□□□□□ -1.83
RNF43Q68DV7 RN7SL594P-201ENST00000470590 287 ntBASIC3.64□□□□□ -1.83
RNF43Q68DV7 Y_RNA.677-201ENST00000516401 85 ntBASIC3.64□□□□□ -1.83
RNF43Q68DV7 MIR5006-201ENST00000583027 110 ntBASIC3.64□□□□□ -1.83
RNF43Q68DV7 AC012493.2-201ENST00000595083 291 ntBASIC3.64□□□□□ -1.83
RNF43Q68DV7 PCGEM1.1-201ENST00000613431 131 ntBASIC3.64□□□□□ -1.83
RNF43Q68DV7 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
RNF43Q68DV7 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RNF43Q68DV7 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
RNF43Q68DV7 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.64□□□□□ -1.83
RNF43Q68DV7 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
RNF43Q68DV7 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RNF43Q68DV7 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.63□□□□□ -1.83
RNF43Q68DV7 AC068647.1-201ENST00000489539 2265 ntBASIC3.63□□□□□ -1.83
RNF43Q68DV7 SNORD73B-201ENST00000364394 72 ntBASIC3.63□□□□□ -1.83
RNF43Q68DV7 SNORD58C-201ENST00000365223 64 ntBASIC3.63□□□□□ -1.83
RNF43Q68DV7 RNU6-805P-201ENST00000365643 106 ntBASIC3.63□□□□□ -1.83
RNF43Q68DV7 SNORA79-201ENST00000408376 140 ntBASIC3.63□□□□□ -1.83
RNF43Q68DV7 AC021205.2-201ENST00000480069 347 ntBASIC3.63□□□□□ -1.83
RNF43Q68DV7 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.63□□□□□ -1.83
RNF43Q68DV7 AL034555.1-201ENST00000604816 211 ntBASIC3.63□□□□□ -1.83
RNF43Q68DV7 AC004832.5-201ENST00000608677 401 ntBASIC3.63□□□□□ -1.83
RNF43Q68DV7 AC022149.2-201ENST00000621061 203 ntBASIC3.63□□□□□ -1.83
RNF43Q68DV7 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RNF43Q68DV7 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.63□□□□□ -1.83
RNF43Q68DV7 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RNF43Q68DV7 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RNF43Q68DV7 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RNF43Q68DV7 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RNF43Q68DV7 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.62□□□□□ -1.83
RNF43Q68DV7 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
RNF43Q68DV7 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RNF43Q68DV7 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RNF43Q68DV7 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.62□□□□□ -1.83
RNF43Q68DV7 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
RNF43Q68DV7 SNORA31-201ENST00000362607 130 ntBASIC3.62□□□□□ -1.83
RNF43Q68DV7 Y_RNA.120-201ENST00000363304 110 ntBASIC3.62□□□□□ -1.83
RNF43Q68DV7 MIR548A1-201ENST00000385041 97 ntBASIC3.62□□□□□ -1.83
RNF43Q68DV7 SNORD17-201ENST00000390930 237 ntBASIC3.62□□□□□ -1.83
RNF43Q68DV7 MIR1278-201ENST00000408753 81 ntBASIC3.62□□□□□ -1.83
RNF43Q68DV7 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.62□□□□□ -1.83
RNF43Q68DV7 AC005300.1-201ENST00000428401 373 ntBASIC3.62□□□□□ -1.83
RNF43Q68DV7 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.62□□□□□ -1.83
RNF43Q68DV7 RPS27P29-201ENST00000463110 252 ntBASIC3.62□□□□□ -1.83
RNF43Q68DV7 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.62□□□□□ -1.83
RNF43Q68DV7 AC084357.1-201ENST00000473404 255 ntBASIC3.62□□□□□ -1.83
RNF43Q68DV7 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.62□□□□□ -1.83
RNF43Q68DV7 SNORA70.12-201ENST00000516084 153 ntBASIC3.62□□□□□ -1.83
RNF43Q68DV7 RNU7-115P-201ENST00000516433 55 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 323.6 ms