Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
HLA-DQA1Q5Y7H0 Z83843.1-201ENST00000604070 3685 ntBASIC3.13□□□□□ -1.91
HLA-DQA1Q5Y7H0 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DQA1Q5Y7H0 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DQA1Q5Y7H0 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
HLA-DQA1Q5Y7H0 SNORA71.3-201ENST00000362582 128 ntBASIC3.12□□□□□ -1.91
HLA-DQA1Q5Y7H0 RNU4-11P-201ENST00000365287 132 ntBASIC3.12□□□□□ -1.91
HLA-DQA1Q5Y7H0 MIR490-201ENST00000384865 128 ntBASIC3.12□□□□□ -1.91
HLA-DQA1Q5Y7H0 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.12□□□□□ -1.91
HLA-DQA1Q5Y7H0 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.12□□□□□ -1.91
HLA-DQA1Q5Y7H0 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.12□□□□□ -1.91
HLA-DQA1Q5Y7H0 AC016717.1-201ENST00000448918 286 ntBASIC3.12□□□□□ -1.91
HLA-DQA1Q5Y7H0 AL137159.1-201ENST00000452808 512 ntBASIC3.12□□□□□ -1.91
HLA-DQA1Q5Y7H0 AC093663.1-201ENST00000497190 394 ntBASIC3.12□□□□□ -1.91
HLA-DQA1Q5Y7H0 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.12□□□□□ -1.91
HLA-DQA1Q5Y7H0 ATP5EP1-201ENST00000510257 156 ntBASIC3.12□□□□□ -1.91
HLA-DQA1Q5Y7H0 RNU6-561P-201ENST00000516222 102 ntBASIC3.12□□□□□ -1.91
HLA-DQA1Q5Y7H0 RNU6-1337P-201ENST00000516525 95 ntBASIC3.12□□□□□ -1.91
HLA-DQA1Q5Y7H0 RNU6-62P-201ENST00000516526 102 ntBASIC3.12□□□□□ -1.91
HLA-DQA1Q5Y7H0 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.12□□□□□ -1.91
HLA-DQA1Q5Y7H0 MIR548X2-201ENST00000579776 100 ntBASIC3.12□□□□□ -1.91
HLA-DQA1Q5Y7H0 MIR4753-201ENST00000585119 83 ntBASIC3.12□□□□□ -1.91
HLA-DQA1Q5Y7H0 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.12□□□□□ -1.91
HLA-DQA1Q5Y7H0 AC012531.5-201ENST00000611375 151 ntBASIC3.12□□□□□ -1.91
HLA-DQA1Q5Y7H0 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.12□□□□□ -1.91
HLA-DQA1Q5Y7H0 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DQA1Q5Y7H0 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DQA1Q5Y7H0 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DQA1Q5Y7H0 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.11□□□□□ -1.91
HLA-DQA1Q5Y7H0 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
HLA-DQA1Q5Y7H0 TNPO1P3-201ENST00000436471 2662 ntBASIC3.11□□□□□ -1.91
HLA-DQA1Q5Y7H0 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HLA-DQA1Q5Y7H0 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
HLA-DQA1Q5Y7H0 RNU6-1290P-201ENST00000362957 109 ntBASIC3.11□□□□□ -1.91
HLA-DQA1Q5Y7H0 RNU1-72P-201ENST00000362976 153 ntBASIC3.11□□□□□ -1.91
HLA-DQA1Q5Y7H0 RNU6-486P-201ENST00000363116 107 ntBASIC3.11□□□□□ -1.91
HLA-DQA1Q5Y7H0 Y_RNA.229-201ENST00000364347 113 ntBASIC3.11□□□□□ -1.91
HLA-DQA1Q5Y7H0 RNU6-234P-201ENST00000365229 104 ntBASIC3.11□□□□□ -1.91
HLA-DQA1Q5Y7H0 AP002088.1-201ENST00000382740 395 ntBASIC3.11□□□□□ -1.91
HLA-DQA1Q5Y7H0 RNU6-1083P-201ENST00000384022 107 ntBASIC3.11□□□□□ -1.91
HLA-DQA1Q5Y7H0 SNORD116-13-201ENST00000384408 92 ntBASIC3.11□□□□□ -1.91
HLA-DQA1Q5Y7H0 RNU6-417P-201ENST00000384712 107 ntBASIC3.11□□□□□ -1.91
HLA-DQA1Q5Y7H0 MIR183-201ENST00000384958 110 ntBASIC3.11□□□□□ -1.91
HLA-DQA1Q5Y7H0 MIR300-201ENST00000401138 83 ntBASIC3.11□□□□□ -1.91
HLA-DQA1Q5Y7H0 AC006461.1-201ENST00000412637 326 ntBASIC3.11□□□□□ -1.91
HLA-DQA1Q5Y7H0 RPL23AP7-203ENST00000449021 469 ntBASIC3.11□□□□□ -1.91
HLA-DQA1Q5Y7H0 AL121914.1-201ENST00000450188 156 ntBASIC3.11□□□□□ -1.91
HLA-DQA1Q5Y7H0 AC010409.1-201ENST00000487382 476 ntBASIC3.11□□□□□ -1.91
HLA-DQA1Q5Y7H0 AC107027.2-201ENST00000512197 115 ntBASIC3.11□□□□□ -1.91
HLA-DQA1Q5Y7H0 AC027419.1-201ENST00000522976 328 ntBASIC3.11□□□□□ -1.91
HLA-DQA1Q5Y7H0 MIR4724-201ENST00000579485 89 ntBASIC3.11□□□□□ -1.91
HLA-DQA1Q5Y7H0 MIR4425-201ENST00000580572 84 ntBASIC3.11□□□□□ -1.91
HLA-DQA1Q5Y7H0 AL365222.1-201ENST00000614661 98 ntBASIC3.11□□□□□ -1.91
HLA-DQA1Q5Y7H0 U6.105-201ENST00000637379 88 ntBASIC3.11□□□□□ -1.91
HLA-DQA1Q5Y7H0 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
HLA-DQA1Q5Y7H0 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
HLA-DQA1Q5Y7H0 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
HLA-DQA1Q5Y7H0 RNU1-33P-201ENST00000364249 162 ntBASIC3.1□□□□□ -1.91
HLA-DQA1Q5Y7H0 SNORA20-201ENST00000384662 132 ntBASIC3.1□□□□□ -1.91
HLA-DQA1Q5Y7H0 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
HLA-DQA1Q5Y7H0 RNU6-1154P-201ENST00000391001 104 ntBASIC3.1□□□□□ -1.91
HLA-DQA1Q5Y7H0 RNA5SP171-201ENST00000391071 115 ntBASIC3.1□□□□□ -1.91
HLA-DQA1Q5Y7H0 MIR873-201ENST00000401120 77 ntBASIC3.1□□□□□ -1.91
HLA-DQA1Q5Y7H0 RNU6-57P-201ENST00000411348 103 ntBASIC3.1□□□□□ -1.91
HLA-DQA1Q5Y7H0 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.1□□□□□ -1.91
HLA-DQA1Q5Y7H0 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.1□□□□□ -1.91
HLA-DQA1Q5Y7H0 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.1□□□□□ -1.91
HLA-DQA1Q5Y7H0 SNORD65B-201ENST00000459126 73 ntBASIC3.1□□□□□ -1.91
HLA-DQA1Q5Y7H0 SNORA25.12-201ENST00000516202 82 ntBASIC3.1□□□□□ -1.91
HLA-DQA1Q5Y7H0 RNU7-115P-201ENST00000516433 55 ntBASIC3.1□□□□□ -1.91
HLA-DQA1Q5Y7H0 RNU6-1231P-201ENST00000517185 103 ntBASIC3.1□□□□□ -1.91
HLA-DQA1Q5Y7H0 AC109329.2-201ENST00000519658 482 ntBASIC3.1□□□□□ -1.91
HLA-DQA1Q5Y7H0 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.1□□□□□ -1.91
HLA-DQA1Q5Y7H0 DNAJC19P2-201ENST00000593340 302 ntBASIC3.1□□□□□ -1.91
HLA-DQA1Q5Y7H0 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.1□□□□□ -1.91
HLA-DQA1Q5Y7H0 snoZ196.1-201ENST00000625269 89 ntBASIC3.1□□□□□ -1.91
HLA-DQA1Q5Y7H0 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.1□□□□□ -1.91
HLA-DQA1Q5Y7H0 AC010332.2-201ENST00000613083 1904 ntBASIC3.09□□□□□ -1.91
HLA-DQA1Q5Y7H0 AL049781.1-201ENST00000623195 3585 ntBASIC3.09□□□□□ -1.91
HLA-DQA1Q5Y7H0 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.09□□□□□ -1.91
HLA-DQA1Q5Y7H0 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HLA-DQA1Q5Y7H0 RNU6-144P-201ENST00000383951 107 ntBASIC3.09□□□□□ -1.91
HLA-DQA1Q5Y7H0 RNU6-975P-201ENST00000384296 105 ntBASIC3.09□□□□□ -1.91
HLA-DQA1Q5Y7H0 SNORA22C-201ENST00000384614 134 ntBASIC3.09□□□□□ -1.91
HLA-DQA1Q5Y7H0 MIR518C-201ENST00000384822 101 ntBASIC3.09□□□□□ -1.91
HLA-DQA1Q5Y7H0 AL606845.1-201ENST00000404881 255 ntBASIC3.09□□□□□ -1.91
HLA-DQA1Q5Y7H0 SNORA36B-201ENST00000410438 131 ntBASIC3.09□□□□□ -1.91
HLA-DQA1Q5Y7H0 RNU6-1328P-201ENST00000410938 106 ntBASIC3.09□□□□□ -1.91
HLA-DQA1Q5Y7H0 AC017083.1-201ENST00000428093 483 ntBASIC3.09□□□□□ -1.91
HLA-DQA1Q5Y7H0 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.09□□□□□ -1.91
HLA-DQA1Q5Y7H0 AC083906.5-201ENST00000503722 328 ntBASIC3.09□□□□□ -1.91
HLA-DQA1Q5Y7H0 RAC1P5-201ENST00000512182 576 ntBASIC3.09□□□□□ -1.91
HLA-DQA1Q5Y7H0 RNU6-479P-201ENST00000516348 105 ntBASIC3.09□□□□□ -1.91
HLA-DQA1Q5Y7H0 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.09□□□□□ -1.91
HLA-DQA1Q5Y7H0 uc_338.1-201ENST00000612113 180 ntBASIC3.09□□□□□ -1.91
HLA-DQA1Q5Y7H0 MIR548AY-201ENST00000617669 107 ntBASIC3.09□□□□□ -1.91
HLA-DQA1Q5Y7H0 MIR7975-201ENST00000619350 68 ntBASIC3.09□□□□□ -1.91
HLA-DQA1Q5Y7H0 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.08□□□□□ -1.92
HLA-DQA1Q5Y7H0 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DQA1Q5Y7H0 MIR367-201ENST00000362299 68 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms