Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 SUMO2P18-201ENST00000518873 252 ntBASIC3.84□□□□□ -1.79
USPL1Q5W0Q7 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.84□□□□□ -1.79
USPL1Q5W0Q7 AP001485.1-201ENST00000604799 199 ntBASIC3.84□□□□□ -1.79
USPL1Q5W0Q7 AL359854.1-201ENST00000614203 1594 ntBASIC3.84□□□□□ -1.8
USPL1Q5W0Q7 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
USPL1Q5W0Q7 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.83□□□□□ -1.8
USPL1Q5W0Q7 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.83□□□□□ -1.8
USPL1Q5W0Q7 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
USPL1Q5W0Q7 AC062016.1-201ENST00000355719 319 ntBASIC3.83□□□□□ -1.8
USPL1Q5W0Q7 Y_RNA.23-201ENST00000362496 106 ntBASIC3.83□□□□□ -1.8
USPL1Q5W0Q7 SNORD56.3-201ENST00000363507 71 ntBASIC3.83□□□□□ -1.8
USPL1Q5W0Q7 SNORA14A-201ENST00000364773 135 ntBASIC3.83□□□□□ -1.8
USPL1Q5W0Q7 SNORD87-201ENST00000364849 89 ntBASIC3.83□□□□□ -1.8
USPL1Q5W0Q7 RNU6-804P-201ENST00000384286 107 ntBASIC3.83□□□□□ -1.8
USPL1Q5W0Q7 MTCO2P33-201ENST00000402100 465 ntBASIC3.83□□□□□ -1.8
USPL1Q5W0Q7 AL031003.1-201ENST00000404229 172 ntBASIC3.83□□□□□ -1.8
USPL1Q5W0Q7 RNA5SP293-201ENST00000410527 113 ntBASIC3.83□□□□□ -1.8
USPL1Q5W0Q7 Y_RNA.637-201ENST00000459424 114 ntBASIC3.83□□□□□ -1.8
USPL1Q5W0Q7 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.83□□□□□ -1.8
USPL1Q5W0Q7 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
USPL1Q5W0Q7 AL670379.2-201ENST00000604983 252 ntBASIC3.83□□□□□ -1.8
USPL1Q5W0Q7 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.83□□□□□ -1.8
USPL1Q5W0Q7 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.83□□□□□ -1.8
USPL1Q5W0Q7 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.83□□□□□ -1.8
USPL1Q5W0Q7 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
USPL1Q5W0Q7 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
USPL1Q5W0Q7 Y_RNA.75-201ENST00000362927 97 ntBASIC3.82□□□□□ -1.8
USPL1Q5W0Q7 Y_RNA.238-201ENST00000364441 102 ntBASIC3.82□□□□□ -1.8
USPL1Q5W0Q7 RNA5SP184-201ENST00000411071 108 ntBASIC3.82□□□□□ -1.8
USPL1Q5W0Q7 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.82□□□□□ -1.8
USPL1Q5W0Q7 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.82□□□□□ -1.8
USPL1Q5W0Q7 SCGB1D5P-201ENST00000515134 247 ntBASIC3.82□□□□□ -1.8
USPL1Q5W0Q7 SNORA64.4-201ENST00000516632 81 ntBASIC3.82□□□□□ -1.8
USPL1Q5W0Q7 SNORD59.2-201ENST00000516873 68 ntBASIC3.82□□□□□ -1.8
USPL1Q5W0Q7 RNU1-117P-201ENST00000517041 158 ntBASIC3.82□□□□□ -1.8
USPL1Q5W0Q7 HSPE1P18-201ENST00000517602 280 ntBASIC3.82□□□□□ -1.8
USPL1Q5W0Q7 GABRG2-229ENST00000641017 3628 ntBASIC3.82□□□□□ -1.8
USPL1Q5W0Q7 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
USPL1Q5W0Q7 RNU4-82P-201ENST00000362443 140 ntBASIC3.81□□□□□ -1.8
USPL1Q5W0Q7 Y_RNA.361-201ENST00000365515 120 ntBASIC3.81□□□□□ -1.8
USPL1Q5W0Q7 MIR586-201ENST00000385035 97 ntBASIC3.81□□□□□ -1.8
USPL1Q5W0Q7 MIR591-201ENST00000385290 95 ntBASIC3.81□□□□□ -1.8
USPL1Q5W0Q7 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.81□□□□□ -1.8
USPL1Q5W0Q7 EIF4EP4-201ENST00000424916 578 ntBASIC3.81□□□□□ -1.8
USPL1Q5W0Q7 AL109933.2-201ENST00000452651 260 ntBASIC3.81□□□□□ -1.8
USPL1Q5W0Q7 AC083906.5-201ENST00000503722 328 ntBASIC3.81□□□□□ -1.8
USPL1Q5W0Q7 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.81□□□□□ -1.8
USPL1Q5W0Q7 AC008739.2-201ENST00000597006 317 ntBASIC3.81□□□□□ -1.8
USPL1Q5W0Q7 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.81□□□□□ -1.8
USPL1Q5W0Q7 AC004832.4-201ENST00000608952 331 ntBASIC3.81□□□□□ -1.8
USPL1Q5W0Q7 AC104465.1-201ENST00000611365 139 ntBASIC3.81□□□□□ -1.8
USPL1Q5W0Q7 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
USPL1Q5W0Q7 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
USPL1Q5W0Q7 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
USPL1Q5W0Q7 AC091152.2-201ENST00000591628 2569 ntBASIC3.8□□□□□ -1.8
USPL1Q5W0Q7 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
USPL1Q5W0Q7 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
USPL1Q5W0Q7 AC073325.2-201ENST00000339545 159 ntBASIC3.8□□□□□ -1.8
USPL1Q5W0Q7 Y_RNA.8-201ENST00000362353 102 ntBASIC3.8□□□□□ -1.8
USPL1Q5W0Q7 snoU2_19.1-201ENST00000362361 80 ntBASIC3.8□□□□□ -1.8
USPL1Q5W0Q7 SNORD114-7-201ENST00000362520 77 ntBASIC3.8□□□□□ -1.8
USPL1Q5W0Q7 RNA5SP383-201ENST00000362934 120 ntBASIC3.8□□□□□ -1.8
USPL1Q5W0Q7 Y_RNA.287-201ENST00000364853 94 ntBASIC3.8□□□□□ -1.8
USPL1Q5W0Q7 RNU6-805P-201ENST00000365643 106 ntBASIC3.8□□□□□ -1.8
USPL1Q5W0Q7 Y_RNA.398-201ENST00000383952 99 ntBASIC3.8□□□□□ -1.8
USPL1Q5W0Q7 RNU6-763P-201ENST00000390865 106 ntBASIC3.8□□□□□ -1.8
USPL1Q5W0Q7 RNA5SP354-201ENST00000391247 136 ntBASIC3.8□□□□□ -1.8
USPL1Q5W0Q7 BMS1P22-201ENST00000414726 313 ntBASIC3.8□□□□□ -1.8
USPL1Q5W0Q7 AL606753.1-201ENST00000427435 87 ntBASIC3.8□□□□□ -1.8
USPL1Q5W0Q7 RPS12P18-201ENST00000442381 270 ntBASIC3.8□□□□□ -1.8
USPL1Q5W0Q7 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.8□□□□□ -1.8
USPL1Q5W0Q7 RNA5SP112-201ENST00000515937 99 ntBASIC3.8□□□□□ -1.8
USPL1Q5W0Q7 SNORA70.12-201ENST00000516084 153 ntBASIC3.8□□□□□ -1.8
USPL1Q5W0Q7 MTND5P41-201ENST00000517498 206 ntBASIC3.8□□□□□ -1.8
USPL1Q5W0Q7 AC100767.1-201ENST00000528178 123 ntBASIC3.8□□□□□ -1.8
USPL1Q5W0Q7 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.8□□□□□ -1.8
USPL1Q5W0Q7 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
USPL1Q5W0Q7 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
USPL1Q5W0Q7 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
USPL1Q5W0Q7 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.79□□□□□ -1.8
USPL1Q5W0Q7 SNORD32B-201ENST00000364460 84 ntBASIC3.79□□□□□ -1.8
USPL1Q5W0Q7 Y_RNA.272-201ENST00000364696 102 ntBASIC3.79□□□□□ -1.8
USPL1Q5W0Q7 Y_RNA.368-201ENST00000365547 113 ntBASIC3.79□□□□□ -1.8
USPL1Q5W0Q7 RNU6-1083P-201ENST00000384022 107 ntBASIC3.79□□□□□ -1.8
USPL1Q5W0Q7 Y_RNA.456-201ENST00000384232 111 ntBASIC3.79□□□□□ -1.8
USPL1Q5W0Q7 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.79□□□□□ -1.8
USPL1Q5W0Q7 RPS27AP9-201ENST00000477681 438 ntBASIC3.79□□□□□ -1.8
USPL1Q5W0Q7 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.79□□□□□ -1.8
USPL1Q5W0Q7 MIR5047-201ENST00000579212 100 ntBASIC3.79□□□□□ -1.8
USPL1Q5W0Q7 AC013791.1-201ENST00000616619 62 ntBASIC3.79□□□□□ -1.8
USPL1Q5W0Q7 U6.98-201ENST00000637157 84 ntBASIC3.79□□□□□ -1.8
USPL1Q5W0Q7 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.79□□□□□ -1.8
USPL1Q5W0Q7 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
USPL1Q5W0Q7 AC010329.5-201ENST00000623497 2174 ntBASIC3.78□□□□□ -1.8
USPL1Q5W0Q7 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
USPL1Q5W0Q7 RNU6-103P-201ENST00000363686 107 ntBASIC3.78□□□□□ -1.8
USPL1Q5W0Q7 RNU6-801P-201ENST00000364087 105 ntBASIC3.78□□□□□ -1.8
USPL1Q5W0Q7 AL139095.1-201ENST00000404326 391 ntBASIC3.78□□□□□ -1.8
USPL1Q5W0Q7 AL355497.1-201ENST00000406262 551 ntBASIC3.78□□□□□ -1.8
USPL1Q5W0Q7 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms