Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 Y_RNA.47-201ENST00000362697 108 ntBASIC2.54□□□□□ -2
TTC39AQ5SRH9 RNU6-1301P-201ENST00000362724 104 ntBASIC2.54□□□□□ -2
TTC39AQ5SRH9 Y_RNA.380-201ENST00000365663 111 ntBASIC2.54□□□□□ -2
TTC39AQ5SRH9 RNU6-318P-201ENST00000384283 103 ntBASIC2.54□□□□□ -2
TTC39AQ5SRH9 RNU6-159P-201ENST00000391080 106 ntBASIC2.54□□□□□ -2
TTC39AQ5SRH9 RNU1-139P-201ENST00000391307 165 ntBASIC2.54□□□□□ -2
TTC39AQ5SRH9 IPO7P1-201ENST00000442031 636 ntBASIC2.54□□□□□ -2
TTC39AQ5SRH9 AC104435.1-201ENST00000483483 166 ntBASIC2.54□□□□□ -2
TTC39AQ5SRH9 AC145146.1-201ENST00000496370 254 ntBASIC2.54□□□□□ -2
TTC39AQ5SRH9 SNORA31.11-201ENST00000516528 139 ntBASIC2.54□□□□□ -2
TTC39AQ5SRH9 PRELID2P1-201ENST00000552837 301 ntBASIC2.54□□□□□ -2
TTC39AQ5SRH9 AC125232.2-201ENST00000592457 143 ntBASIC2.54□□□□□ -2
TTC39AQ5SRH9 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.54□□□□□ -2
TTC39AQ5SRH9 RPL30P11-203ENST00000598995 310 ntBASIC2.54□□□□□ -2
TTC39AQ5SRH9 AL355297.3-201ENST00000604082 446 ntBASIC2.54□□□□□ -2
TTC39AQ5SRH9 AL021879.1-201ENST00000611756 288 ntBASIC2.54□□□□□ -2
TTC39AQ5SRH9 AC005296.1-201ENST00000616145 209 ntBASIC2.54□□□□□ -2
TTC39AQ5SRH9 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.54□□□□□ -2
TTC39AQ5SRH9 ZNF204P-201ENST00000416749 2397 ntBASIC2.53□□□□□ -2
TTC39AQ5SRH9 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TTC39AQ5SRH9 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.53□□□□□ -2
TTC39AQ5SRH9 RNU4-50P-201ENST00000364361 141 ntBASIC2.53□□□□□ -2
TTC39AQ5SRH9 RNU6-926P-201ENST00000384075 107 ntBASIC2.53□□□□□ -2
TTC39AQ5SRH9 Y_RNA.551-201ENST00000384661 102 ntBASIC2.53□□□□□ -2
TTC39AQ5SRH9 SNORA12-201ENST00000391162 147 ntBASIC2.53□□□□□ -2
TTC39AQ5SRH9 RNU6-130P-201ENST00000411112 103 ntBASIC2.53□□□□□ -2
TTC39AQ5SRH9 RNU6-1001P-201ENST00000411265 100 ntBASIC2.53□□□□□ -2
TTC39AQ5SRH9 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
TTC39AQ5SRH9 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.53□□□□□ -2
TTC39AQ5SRH9 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.53□□□□□ -2
TTC39AQ5SRH9 IFNA11P-201ENST00000446352 526 ntBASIC2.53□□□□□ -2
TTC39AQ5SRH9 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.53□□□□□ -2
TTC39AQ5SRH9 RNA5SP112-201ENST00000515937 99 ntBASIC2.53□□□□□ -2
TTC39AQ5SRH9 AC091144.1-201ENST00000519573 138 ntBASIC2.53□□□□□ -2
TTC39AQ5SRH9 AC093023.1-201ENST00000547375 507 ntBASIC2.53□□□□□ -2
TTC39AQ5SRH9 AC121758.2-201ENST00000553271 193 ntBASIC2.53□□□□□ -2
TTC39AQ5SRH9 AL138963.2-201ENST00000605137 226 ntBASIC2.53□□□□□ -2
TTC39AQ5SRH9 MIR6895-201ENST00000613497 78 ntBASIC2.53□□□□□ -2
TTC39AQ5SRH9 AC011476.5-201ENST00000615594 130 ntBASIC2.53□□□□□ -2
TTC39AQ5SRH9 MIR7843-201ENST00000622274 79 ntBASIC2.53□□□□□ -2
TTC39AQ5SRH9 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.53□□□□□ -2
TTC39AQ5SRH9 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TTC39AQ5SRH9 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.53□□□□□ -2.01
TTC39AQ5SRH9 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
TTC39AQ5SRH9 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.52□□□□□ -2.01
TTC39AQ5SRH9 Y_RNA.26-201ENST00000362539 101 ntBASIC2.52□□□□□ -2.01
TTC39AQ5SRH9 RNU6-486P-201ENST00000363116 107 ntBASIC2.52□□□□□ -2.01
TTC39AQ5SRH9 RNU6-873P-201ENST00000363833 107 ntBASIC2.52□□□□□ -2.01
TTC39AQ5SRH9 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.52□□□□□ -2.01
TTC39AQ5SRH9 RNU6-281P-201ENST00000384212 103 ntBASIC2.52□□□□□ -2.01
TTC39AQ5SRH9 RNY3P4-201ENST00000384428 101 ntBASIC2.52□□□□□ -2.01
TTC39AQ5SRH9 Y_RNA.526-201ENST00000384572 110 ntBASIC2.52□□□□□ -2.01
TTC39AQ5SRH9 SNORA80E-201ENST00000384744 137 ntBASIC2.52□□□□□ -2.01
TTC39AQ5SRH9 RNU6-220P-201ENST00000390919 107 ntBASIC2.52□□□□□ -2.01
TTC39AQ5SRH9 RNU6-1109P-201ENST00000391187 107 ntBASIC2.52□□□□□ -2.01
TTC39AQ5SRH9 RNA5SP201-201ENST00000410316 124 ntBASIC2.52□□□□□ -2.01
TTC39AQ5SRH9 RPS26P42-201ENST00000413485 326 ntBASIC2.52□□□□□ -2.01
TTC39AQ5SRH9 ELOCP20-201ENST00000422460 345 ntBASIC2.52□□□□□ -2.01
TTC39AQ5SRH9 RPL30P4-201ENST00000429309 333 ntBASIC2.52□□□□□ -2.01
TTC39AQ5SRH9 MTCYBP9-201ENST00000431021 303 ntBASIC2.52□□□□□ -2.01
TTC39AQ5SRH9 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
TTC39AQ5SRH9 RPEP5-201ENST00000441137 268 ntBASIC2.52□□□□□ -2.01
TTC39AQ5SRH9 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.52□□□□□ -2.01
TTC39AQ5SRH9 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.52□□□□□ -2.01
TTC39AQ5SRH9 AC107222.1-201ENST00000510899 637 ntBASIC2.52□□□□□ -2.01
TTC39AQ5SRH9 MTCO2P24-201ENST00000515611 426 ntBASIC2.52□□□□□ -2.01
TTC39AQ5SRH9 HSPE1P18-201ENST00000517602 280 ntBASIC2.52□□□□□ -2.01
TTC39AQ5SRH9 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
TTC39AQ5SRH9 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.52□□□□□ -2.01
TTC39AQ5SRH9 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.52□□□□□ -2.01
TTC39AQ5SRH9 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.52□□□□□ -2.01
TTC39AQ5SRH9 MIR3199-1-201ENST00000582434 88 ntBASIC2.52□□□□□ -2.01
TTC39AQ5SRH9 MIR5002-201ENST00000584713 97 ntBASIC2.52□□□□□ -2.01
TTC39AQ5SRH9 PCGEM1.1-201ENST00000613431 131 ntBASIC2.52□□□□□ -2.01
TTC39AQ5SRH9 Y_RNA.783-201ENST00000613546 102 ntBASIC2.52□□□□□ -2.01
TTC39AQ5SRH9 AC090517.3-201ENST00000625170 141 ntBASIC2.52□□□□□ -2.01
TTC39AQ5SRH9 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
TTC39AQ5SRH9 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TTC39AQ5SRH9 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
TTC39AQ5SRH9 RNU1-76P-201ENST00000362903 159 ntBASIC2.51□□□□□ -2.01
TTC39AQ5SRH9 RNU1-72P-201ENST00000362976 153 ntBASIC2.51□□□□□ -2.01
TTC39AQ5SRH9 Y_RNA.149-201ENST00000363558 117 ntBASIC2.51□□□□□ -2.01
TTC39AQ5SRH9 Y_RNA.176-201ENST00000363815 109 ntBASIC2.51□□□□□ -2.01
TTC39AQ5SRH9 SNORD115-8-201ENST00000363856 82 ntBASIC2.51□□□□□ -2.01
TTC39AQ5SRH9 Y_RNA.214-201ENST00000364201 112 ntBASIC2.51□□□□□ -2.01
TTC39AQ5SRH9 SNORD115-38-201ENST00000365037 82 ntBASIC2.51□□□□□ -2.01
TTC39AQ5SRH9 RNU6-806P-201ENST00000365147 105 ntBASIC2.51□□□□□ -2.01
TTC39AQ5SRH9 Y_RNA.458-201ENST00000384240 102 ntBASIC2.51□□□□□ -2.01
TTC39AQ5SRH9 RNU6-196P-201ENST00000384315 107 ntBASIC2.51□□□□□ -2.01
TTC39AQ5SRH9 Y_RNA.574-201ENST00000384766 95 ntBASIC2.51□□□□□ -2.01
TTC39AQ5SRH9 SNORA46.1-201ENST00000391069 153 ntBASIC2.51□□□□□ -2.01
TTC39AQ5SRH9 AL139156.1-201ENST00000412785 841 ntBASIC2.51□□□□□ -2.01
TTC39AQ5SRH9 AL445646.1-201ENST00000431784 216 ntBASIC2.51□□□□□ -2.01
TTC39AQ5SRH9 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.51□□□□□ -2.01
TTC39AQ5SRH9 RNU6-237P-201ENST00000515985 71 ntBASIC2.51□□□□□ -2.01
TTC39AQ5SRH9 RNU6-897P-201ENST00000517135 105 ntBASIC2.51□□□□□ -2.01
TTC39AQ5SRH9 MIR2355-201ENST00000517199 87 ntBASIC2.51□□□□□ -2.01
TTC39AQ5SRH9 AC034114.1-201ENST00000520293 285 ntBASIC2.51□□□□□ -2.01
TTC39AQ5SRH9 MIR4503-201ENST00000582187 83 ntBASIC2.51□□□□□ -2.01
TTC39AQ5SRH9 AC005520.5-201ENST00000613926 164 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 143.5 ms