Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AC005520.5-201ENST00000613926 164 ntBASIC2.84□□□□□ -1.95
SLC44A4Q53GD3 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.84□□□□□ -1.95
SLC44A4Q53GD3 AC137590.2-201ENST00000619709 240 ntBASIC2.84□□□□□ -1.95
SLC44A4Q53GD3 AC064859.1-201ENST00000624741 174 ntBASIC2.84□□□□□ -1.95
SLC44A4Q53GD3 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.84□□□□□ -1.95
SLC44A4Q53GD3 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.96
SLC44A4Q53GD3 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.83□□□□□ -1.96
SLC44A4Q53GD3 AC026241.1-201ENST00000517873 2142 ntBASIC2.83□□□□□ -1.96
SLC44A4Q53GD3 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
SLC44A4Q53GD3 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
SLC44A4Q53GD3 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.83□□□□□ -1.96
SLC44A4Q53GD3 RNA5SP361-201ENST00000362686 118 ntBASIC2.83□□□□□ -1.96
SLC44A4Q53GD3 RNU6-200P-201ENST00000364743 107 ntBASIC2.83□□□□□ -1.96
SLC44A4Q53GD3 SNORA67.4-201ENST00000384688 142 ntBASIC2.83□□□□□ -1.96
SLC44A4Q53GD3 MIR181A2-201ENST00000384863 110 ntBASIC2.83□□□□□ -1.96
SLC44A4Q53GD3 RNA5SP213-201ENST00000391031 106 ntBASIC2.83□□□□□ -1.96
SLC44A4Q53GD3 FO393413.1-201ENST00000402892 195 ntBASIC2.83□□□□□ -1.96
SLC44A4Q53GD3 MRPL35P1-201ENST00000404272 572 ntBASIC2.83□□□□□ -1.96
SLC44A4Q53GD3 AL603908.1-201ENST00000406098 201 ntBASIC2.83□□□□□ -1.96
SLC44A4Q53GD3 Y_RNA.597-201ENST00000410463 100 ntBASIC2.83□□□□□ -1.96
SLC44A4Q53GD3 UBBP3-201ENST00000445497 241 ntBASIC2.83□□□□□ -1.96
SLC44A4Q53GD3 UBL5P3-201ENST00000475112 231 ntBASIC2.83□□□□□ -1.96
SLC44A4Q53GD3 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.83□□□□□ -1.96
SLC44A4Q53GD3 RNU6-237P-201ENST00000515985 71 ntBASIC2.83□□□□□ -1.96
SLC44A4Q53GD3 MIR449C-201ENST00000516047 92 ntBASIC2.83□□□□□ -1.96
SLC44A4Q53GD3 RNA5SP24-201ENST00000516478 95 ntBASIC2.83□□□□□ -1.96
SLC44A4Q53GD3 DEFB131C-201ENST00000528817 165 ntBASIC2.83□□□□□ -1.96
SLC44A4Q53GD3 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.83□□□□□ -1.96
SLC44A4Q53GD3 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.83□□□□□ -1.96
SLC44A4Q53GD3 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.83□□□□□ -1.96
SLC44A4Q53GD3 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
SLC44A4Q53GD3 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.83□□□□□ -1.96
SLC44A4Q53GD3 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
SLC44A4Q53GD3 U3.9-201ENST00000363823 204 ntBASIC2.82□□□□□ -1.96
SLC44A4Q53GD3 RNU6-873P-201ENST00000363833 107 ntBASIC2.82□□□□□ -1.96
SLC44A4Q53GD3 Y_RNA.462-201ENST00000384268 102 ntBASIC2.82□□□□□ -1.96
SLC44A4Q53GD3 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
SLC44A4Q53GD3 RNU6-1114P-201ENST00000516022 107 ntBASIC2.82□□□□□ -1.96
SLC44A4Q53GD3 EIF4A1P12-201ENST00000551910 141 ntBASIC2.82□□□□□ -1.96
SLC44A4Q53GD3 AC130289.1-201ENST00000577321 73 ntBASIC2.82□□□□□ -1.96
SLC44A4Q53GD3 MIR4643-201ENST00000577473 78 ntBASIC2.82□□□□□ -1.96
SLC44A4Q53GD3 AL356280.1-201ENST00000603614 379 ntBASIC2.82□□□□□ -1.96
SLC44A4Q53GD3 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.82□□□□□ -1.96
SLC44A4Q53GD3 MIR7843-201ENST00000622274 79 ntBASIC2.82□□□□□ -1.96
SLC44A4Q53GD3 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.82□□□□□ -1.96
SLC44A4Q53GD3 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.82□□□□□ -1.96
SLC44A4Q53GD3 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.82□□□□□ -1.96
SLC44A4Q53GD3 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
SLC44A4Q53GD3 Y_RNA.269-201ENST00000364685 89 ntBASIC2.81□□□□□ -1.96
SLC44A4Q53GD3 Y_RNA.352-201ENST00000365439 102 ntBASIC2.81□□□□□ -1.96
SLC44A4Q53GD3 RNU4-70P-201ENST00000384579 139 ntBASIC2.81□□□□□ -1.96
SLC44A4Q53GD3 MIR627-201ENST00000384979 97 ntBASIC2.81□□□□□ -1.96
SLC44A4Q53GD3 Y_RNA.581-201ENST00000391017 97 ntBASIC2.81□□□□□ -1.96
SLC44A4Q53GD3 RNU6-159P-201ENST00000391080 106 ntBASIC2.81□□□□□ -1.96
SLC44A4Q53GD3 RNU1-139P-201ENST00000391307 165 ntBASIC2.81□□□□□ -1.96
SLC44A4Q53GD3 RNU6-1001P-201ENST00000411265 100 ntBASIC2.81□□□□□ -1.96
SLC44A4Q53GD3 AC027124.2-201ENST00000428249 105 ntBASIC2.81□□□□□ -1.96
SLC44A4Q53GD3 AC080013.2-201ENST00000460866 323 ntBASIC2.81□□□□□ -1.96
SLC44A4Q53GD3 RNU6-586P-201ENST00000517265 104 ntBASIC2.81□□□□□ -1.96
SLC44A4Q53GD3 AC026470.2-201ENST00000561492 181 ntBASIC2.81□□□□□ -1.96
SLC44A4Q53GD3 AL356575.1-201ENST00000603008 283 ntBASIC2.81□□□□□ -1.96
SLC44A4Q53GD3 AC009779.6-201ENST00000603972 165 ntBASIC2.81□□□□□ -1.96
SLC44A4Q53GD3 AL138963.2-201ENST00000605137 226 ntBASIC2.81□□□□□ -1.96
SLC44A4Q53GD3 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.81□□□□□ -1.96
SLC44A4Q53GD3 AC005296.1-201ENST00000616145 209 ntBASIC2.81□□□□□ -1.96
SLC44A4Q53GD3 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.81□□□□□ -1.96
SLC44A4Q53GD3 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
SLC44A4Q53GD3 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SLC44A4Q53GD3 RNU6-1266P-201ENST00000362794 105 ntBASIC2.8□□□□□ -1.96
SLC44A4Q53GD3 SNORD81.1-201ENST00000363064 77 ntBASIC2.8□□□□□ -1.96
SLC44A4Q53GD3 SNORD115-8-201ENST00000363856 82 ntBASIC2.8□□□□□ -1.96
SLC44A4Q53GD3 SNORD56.5-201ENST00000364281 72 ntBASIC2.8□□□□□ -1.96
SLC44A4Q53GD3 SNORD115-38-201ENST00000365037 82 ntBASIC2.8□□□□□ -1.96
SLC44A4Q53GD3 SNORA18.2-201ENST00000383865 132 ntBASIC2.8□□□□□ -1.96
SLC44A4Q53GD3 MIR29B2-201ENST00000385055 81 ntBASIC2.8□□□□□ -1.96
SLC44A4Q53GD3 SNORD12B-201ENST00000410433 91 ntBASIC2.8□□□□□ -1.96
SLC44A4Q53GD3 AC004866.1-201ENST00000411748 78 ntBASIC2.8□□□□□ -1.96
SLC44A4Q53GD3 AL451074.5-201ENST00000415894 435 ntBASIC2.8□□□□□ -1.96
SLC44A4Q53GD3 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.8□□□□□ -1.96
SLC44A4Q53GD3 AL445687.1-201ENST00000439946 251 ntBASIC2.8□□□□□ -1.96
SLC44A4Q53GD3 HSPE1P25-201ENST00000455484 251 ntBASIC2.8□□□□□ -1.96
SLC44A4Q53GD3 snoU13.26-201ENST00000459452 105 ntBASIC2.8□□□□□ -1.96
SLC44A4Q53GD3 RNU6-496P-201ENST00000516145 99 ntBASIC2.8□□□□□ -1.96
SLC44A4Q53GD3 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.8□□□□□ -1.96
SLC44A4Q53GD3 AC010297.1-201ENST00000623948 149 ntBASIC2.8□□□□□ -1.96
SLC44A4Q53GD3 AC092593.1-201ENST00000515413 1815 ntBASIC2.79□□□□□ -1.96
SLC44A4Q53GD3 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.79□□□□□ -1.96
SLC44A4Q53GD3 U8.2-201ENST00000363156 134 ntBASIC2.79□□□□□ -1.96
SLC44A4Q53GD3 SNORD32B-201ENST00000364460 84 ntBASIC2.79□□□□□ -1.96
SLC44A4Q53GD3 Y_RNA.274-201ENST00000364714 101 ntBASIC2.79□□□□□ -1.96
SLC44A4Q53GD3 Y_RNA.286-201ENST00000364813 102 ntBASIC2.79□□□□□ -1.96
SLC44A4Q53GD3 RNA5SP125-201ENST00000364843 120 ntBASIC2.79□□□□□ -1.96
SLC44A4Q53GD3 RNU6-1180P-201ENST00000364935 107 ntBASIC2.79□□□□□ -1.96
SLC44A4Q53GD3 RNU6-281P-201ENST00000384212 103 ntBASIC2.79□□□□□ -1.96
SLC44A4Q53GD3 RNU4-30P-201ENST00000410245 143 ntBASIC2.79□□□□□ -1.96
SLC44A4Q53GD3 PIGPP3-201ENST00000425307 415 ntBASIC2.79□□□□□ -1.96
SLC44A4Q53GD3 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.79□□□□□ -1.96
SLC44A4Q53GD3 RPS29P6-201ENST00000438196 145 ntBASIC2.79□□□□□ -1.96
SLC44A4Q53GD3 AC096638.1-201ENST00000444678 216 ntBASIC2.79□□□□□ -1.96
SLC44A4Q53GD3 AC007215.1-201ENST00000464893 276 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms