| CTXN3 | Q4LDR2 | MIR3670-3-201 | ENST00000584855 | 65 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | AC092447.9-201 | ENST00000603395 | 144 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | MIR3670-4-201 | ENST00000612260 | 65 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | DSCR8-208 | ENST00000614538 | 403 nt | APPRIS P5 TSL 5 BASIC | 2.31 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | AL078596.1-201 | ENST00000624856 | 447 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | AC068205.3-201 | ENST00000636385 | 468 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | MIR219B-201 | ENST00000637023 | 88 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | AC007336.1-201 | ENST00000576365 | 3828 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | AKAP9-203 | ENST00000359028 | 12247 nt | APPRIS ALT2 TSL 5 BASIC | 2.31 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | NEDD1-204 | ENST00000457368 | 3162 nt | TSL 2 BASIC | 2.3 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | Y_RNA.11-201 | ENST00000362375 | 109 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | RNU6-1164P-201 | ENST00000364428 | 107 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | SNORD87-201 | ENST00000364849 | 89 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | SNORA6-201 | ENST00000384033 | 151 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | RNU6-418P-201 | ENST00000384035 | 107 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | SNORA67.2-201 | ENST00000384300 | 149 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | MIR518A2-201 | ENST00000384966 | 87 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | AL023284.1-201 | ENST00000403956 | 276 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | RNA5SP504-201 | ENST00000410676 | 117 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | BX510359.4-201 | ENST00000423750 | 193 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | Y_RNA.639-201 | ENST00000458981 | 102 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | AC114982.1-201 | ENST00000469402 | 321 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | RNA5SP82-201 | ENST00000516707 | 92 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | TRAV1-1-201 | ENST00000542354 | 392 nt | APPRIS P1 BASIC | 2.3 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | AC011825.2-201 | ENST00000583138 | 553 nt | TSL 4 BASIC | 2.3 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | U2.1-201 | ENST00000618978 | 145 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | uc_338.22-201 | ENST00000622722 | 187 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | AC008873.1-201 | ENST00000625051 | 138 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | SENP7-206 | ENST00000394094 | 4703 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.3 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | MARCH7-203 | ENST00000409591 | 2147 nt | TSL 2 BASIC | 2.29 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | SNORD114-6-201 | ENST00000364393 | 72 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | Y_RNA.395-201 | ENST00000383945 | 109 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | Y_RNA.445-201 | ENST00000384168 | 102 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | MIR329-1-201 | ENST00000385028 | 80 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | AL355497.1-201 | ENST00000406262 | 551 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | MIR1289-2-201 | ENST00000408360 | 111 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | Y_RNA.595-201 | ENST00000410403 | 105 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | FO680682.1-201 | ENST00000421261 | 345 nt | TSL 3 BASIC | 2.29 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | IPO7P1-201 | ENST00000442031 | 636 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | AC074290.1-201 | ENST00000448883 | 135 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | AC016717.1-201 | ENST00000448918 | 286 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | AC010531.2-201 | ENST00000465012 | 153 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | AC087441.2-201 | ENST00000529141 | 262 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | AC004486.1-201 | ENST00000546846 | 233 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | MYL12BP1-201 | ENST00000569826 | 507 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | AC006157.1-201 | ENST00000611750 | 366 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | MIR6895-201 | ENST00000613497 | 78 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | AL590240.4-201 | ENST00000616908 | 390 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | AC091925.1-201 | ENST00000623204 | 462 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | AC138305.3-201 | ENST00000624988 | 240 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | ABCA9-AS1-203 | ENST00000627596 | 426 nt | TSL 5 BASIC | 2.29 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | SAMD9L-201 | ENST00000318238 | 7134 nt | APPRIS P1 TSL 1 (best) BASIC | 2.29 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | MIR340-201 | ENST00000362125 | 95 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | RNU6-1301P-201 | ENST00000362724 | 104 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | Y_RNA.112-201 | ENST00000363250 | 102 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | SNORA25.6-201 | ENST00000364121 | 118 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | RNU6-318P-201 | ENST00000384283 | 103 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | RNU6-975P-201 | ENST00000384296 | 105 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | RNU6-308P-201 | ENST00000390957 | 107 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | RNA5SP181-201 | ENST00000410246 | 98 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | AC018865.2-201 | ENST00000423631 | 129 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | MTCO2P12-201 | ENST00000427426 | 682 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | HMGN2P3-201 | ENST00000433603 | 273 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | HMGN2P5-201 | ENST00000436882 | 273 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | EHHADH-202 | ENST00000440662 | 656 nt | TSL 3 BASIC | 2.28 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | MTCO1P44-201 | ENST00000441935 | 243 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | AL137792.2-201 | ENST00000443484 | 235 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | CHEK2P4-201 | ENST00000450340 | 246 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | AP005660.1-201 | ENST00000522972 | 293 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | AC006600.1-201 | ENST00000572529 | 153 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | LINC02104-202 | ENST00000604954 | 599 nt | TSL 3 BASIC | 2.28 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | BCL2L11-225 | ENST00000640419 | 249 nt | APPRIS ALT2 TSL 5 BASIC | 2.28 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | ZNF72P-201 | ENST00000425869 | 1908 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| CTXN3 | Q4LDR2 | VPS13A-206 | ENST00000376646 | 2262 nt | TSL 5 BASIC | 2.28 | □□□□□ -2.05 | | |
| CTXN3 | Q4LDR2 | RICTOR-202 | ENST00000357387 | 9543 nt | APPRIS P1 TSL 1 (best) BASIC | 2.27 | □□□□□ -2.05 | | |
| CTXN3 | Q4LDR2 | RNU1-58P-201 | ENST00000362413 | 163 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| CTXN3 | Q4LDR2 | Y_RNA.39-201 | ENST00000362620 | 98 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| CTXN3 | Q4LDR2 | RNU6-23P-201 | ENST00000363283 | 107 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| CTXN3 | Q4LDR2 | RNU1-115P-201 | ENST00000365329 | 160 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| CTXN3 | Q4LDR2 | RNU6-1145P-201 | ENST00000384246 | 107 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| CTXN3 | Q4LDR2 | SNORA48.3-201 | ENST00000391081 | 134 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| CTXN3 | Q4LDR2 | RNA5SP465-201 | ENST00000391195 | 109 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| CTXN3 | Q4LDR2 | AL353680.1-201 | ENST00000433788 | 337 nt | TSL 3 BASIC | 2.27 | □□□□□ -2.05 | | |
| CTXN3 | Q4LDR2 | AC116666.1-201 | ENST00000453915 | 551 nt | TSL 5 BASIC | 2.27 | □□□□□ -2.05 | | |
| CTXN3 | Q4LDR2 | RNU7-57P-201 | ENST00000459540 | 60 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| CTXN3 | Q4LDR2 | AC107222.1-201 | ENST00000510899 | 637 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| CTXN3 | Q4LDR2 | RNU6-948P-201 | ENST00000516374 | 107 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| CTXN3 | Q4LDR2 | RNU6-107P-201 | ENST00000516643 | 102 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| CTXN3 | Q4LDR2 | RN7SKP49-201 | ENST00000516675 | 260 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| CTXN3 | Q4LDR2 | AC107886.1-201 | ENST00000526935 | 516 nt | TSL 3 BASIC | 2.27 | □□□□□ -2.05 | | |
| CTXN3 | Q4LDR2 | VN1R91P-201 | ENST00000594377 | 169 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| CTXN3 | Q4LDR2 | MIR4272-201 | ENST00000635924 | 64 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| CTXN3 | Q4LDR2 | AC008555.8-201 | ENST00000623602 | 2168 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| CTXN3 | Q4LDR2 | Y_RNA.138-201 | ENST00000363462 | 102 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| CTXN3 | Q4LDR2 | RNA5SP493-201 | ENST00000364115 | 91 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| CTXN3 | Q4LDR2 | RNY1P14-201 | ENST00000384426 | 108 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| CTXN3 | Q4LDR2 | RNU11-3P-201 | ENST00000391111 | 133 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| CTXN3 | Q4LDR2 | TTTY16-201 | ENST00000437686 | 192 nt | TSL 1 (best) BASIC | 2.26 | □□□□□ -2.05 | | |
| CTXN3 | Q4LDR2 | AL357134.1-201 | ENST00000445848 | 426 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| CTXN3 | Q4LDR2 | UQCRBP2-201 | ENST00000447827 | 297 nt | BASIC | 2.26 | □□□□□ -2.05 | | |