Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC006504.8-201ENST00000621046 635 ntBASIC1.66□□□□□ -2.14
SHROOM1Q2M3G4 AC022513.1-201ENST00000624512 117 ntBASIC1.66□□□□□ -2.14
SHROOM1Q2M3G4 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
SHROOM1Q2M3G4 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
SHROOM1Q2M3G4 Y_RNA.619-201ENST00000410951 90 ntBASIC1.65□□□□□ -2.15
SHROOM1Q2M3G4 RPL30P16-201ENST00000419341 429 ntBASIC1.65□□□□□ -2.15
SHROOM1Q2M3G4 USP9YP30-201ENST00000430729 455 ntBASIC1.65□□□□□ -2.15
SHROOM1Q2M3G4 MTATP6P13-201ENST00000438531 667 ntBASIC1.65□□□□□ -2.15
SHROOM1Q2M3G4 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.65□□□□□ -2.15
SHROOM1Q2M3G4 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.65□□□□□ -2.15
SHROOM1Q2M3G4 AC004223.1-201ENST00000479840 271 ntBASIC1.65□□□□□ -2.15
SHROOM1Q2M3G4 AC097473.1-201ENST00000508142 408 ntBASIC1.65□□□□□ -2.15
SHROOM1Q2M3G4 AP003033.1-201ENST00000527244 415 ntBASIC1.65□□□□□ -2.15
SHROOM1Q2M3G4 MIR4790-201ENST00000577799 79 ntBASIC1.65□□□□□ -2.15
SHROOM1Q2M3G4 MIR5094-201ENST00000578766 85 ntBASIC1.65□□□□□ -2.15
SHROOM1Q2M3G4 AC016925.2-201ENST00000605108 242 ntBASIC1.65□□□□□ -2.15
SHROOM1Q2M3G4 AL161722.3-201ENST00000605789 2983 ntBASIC1.65□□□□□ -2.15
SHROOM1Q2M3G4 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
SHROOM1Q2M3G4 AL159152.1-201ENST00000635019 2587 ntBASIC1.65□□□□□ -2.15
SHROOM1Q2M3G4 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
SHROOM1Q2M3G4 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.65□□□□□ -2.15
SHROOM1Q2M3G4 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
SHROOM1Q2M3G4 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.64□□□□□ -2.15
SHROOM1Q2M3G4 Y_RNA.301-201ENST00000364990 103 ntBASIC1.64□□□□□ -2.15
SHROOM1Q2M3G4 SNORA25.9-201ENST00000365087 128 ntBASIC1.64□□□□□ -2.15
SHROOM1Q2M3G4 Y_RNA.508-201ENST00000384502 114 ntBASIC1.64□□□□□ -2.15
SHROOM1Q2M3G4 Y_RNA.533-201ENST00000384596 114 ntBASIC1.64□□□□□ -2.15
SHROOM1Q2M3G4 MIR1276-201ENST00000408707 83 ntBASIC1.64□□□□□ -2.15
SHROOM1Q2M3G4 RNA5SP118-201ENST00000410385 109 ntBASIC1.64□□□□□ -2.15
SHROOM1Q2M3G4 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.64□□□□□ -2.15
SHROOM1Q2M3G4 AC016925.1-201ENST00000458303 298 ntBASIC1.64□□□□□ -2.15
SHROOM1Q2M3G4 RPS29P23-201ENST00000458635 123 ntBASIC1.64□□□□□ -2.15
SHROOM1Q2M3G4 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.64□□□□□ -2.15
SHROOM1Q2M3G4 RNU6-1041P-201ENST00000516254 102 ntBASIC1.64□□□□□ -2.15
SHROOM1Q2M3G4 RNU1-117P-201ENST00000517041 158 ntBASIC1.64□□□□□ -2.15
SHROOM1Q2M3G4 RRN3P3-201ENST00000549207 578 ntBASIC1.64□□□□□ -2.15
SHROOM1Q2M3G4 MIR4273-201ENST00000582824 84 ntBASIC1.64□□□□□ -2.15
SHROOM1Q2M3G4 AC018638.8-201ENST00000588755 281 ntBASIC1.64□□□□□ -2.15
SHROOM1Q2M3G4 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.64□□□□□ -2.15
SHROOM1Q2M3G4 AP003465.2-201ENST00000602571 373 ntBASIC1.64□□□□□ -2.15
SHROOM1Q2M3G4 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.64□□□□□ -2.15
SHROOM1Q2M3G4 TCL6_2.1-201ENST00000615162 119 ntBASIC1.64□□□□□ -2.15
SHROOM1Q2M3G4 AC137590.2-201ENST00000619709 240 ntBASIC1.64□□□□□ -2.15
SHROOM1Q2M3G4 SCARNA4-201ENST00000629045 128 ntBASIC1.64□□□□□ -2.15
SHROOM1Q2M3G4 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.64□□□□□ -2.15
SHROOM1Q2M3G4 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.64□□□□□ -2.15
SHROOM1Q2M3G4 MTND5P9-201ENST00000503854 1755 ntBASIC1.63□□□□□ -2.15
SHROOM1Q2M3G4 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SHROOM1Q2M3G4 RNU6-1305P-201ENST00000364353 104 ntBASIC1.63□□□□□ -2.15
SHROOM1Q2M3G4 RNU6-1013P-201ENST00000384180 107 ntBASIC1.63□□□□□ -2.15
SHROOM1Q2M3G4 FTH1P12-201ENST00000432137 551 ntBASIC1.63□□□□□ -2.15
SHROOM1Q2M3G4 MTCO1P44-201ENST00000441935 243 ntBASIC1.63□□□□□ -2.15
SHROOM1Q2M3G4 snoU13.9-201ENST00000458927 103 ntBASIC1.63□□□□□ -2.15
SHROOM1Q2M3G4 RNA5SP61-201ENST00000516453 100 ntBASIC1.63□□□□□ -2.15
SHROOM1Q2M3G4 MTND4LP26-201ENST00000518144 282 ntBASIC1.63□□□□□ -2.15
SHROOM1Q2M3G4 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.63□□□□□ -2.15
SHROOM1Q2M3G4 AF235103.2-201ENST00000525753 346 ntBASIC1.63□□□□□ -2.15
SHROOM1Q2M3G4 AC084364.2-201ENST00000546924 395 ntBASIC1.63□□□□□ -2.15
SHROOM1Q2M3G4 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.63□□□□□ -2.15
SHROOM1Q2M3G4 AC080078.2-201ENST00000603766 501 ntBASIC1.63□□□□□ -2.15
SHROOM1Q2M3G4 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.63□□□□□ -2.15
SHROOM1Q2M3G4 AL353770.2-201ENST00000620024 78 ntBASIC1.63□□□□□ -2.15
SHROOM1Q2M3G4 RNU6-862P-201ENST00000362804 105 ntBASIC1.62□□□□□ -2.15
SHROOM1Q2M3G4 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.62□□□□□ -2.15
SHROOM1Q2M3G4 MIR1283-1-201ENST00000408494 87 ntBASIC1.62□□□□□ -2.15
SHROOM1Q2M3G4 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
SHROOM1Q2M3G4 DAP3P1-201ENST00000441522 278 ntBASIC1.62□□□□□ -2.15
SHROOM1Q2M3G4 AC245517.4-201ENST00000448601 281 ntBASIC1.62□□□□□ -2.15
SHROOM1Q2M3G4 RNU6-329P-201ENST00000459618 107 ntBASIC1.62□□□□□ -2.15
SHROOM1Q2M3G4 RPL30P10-201ENST00000488148 337 ntBASIC1.62□□□□□ -2.15
SHROOM1Q2M3G4 HMGN1P7-201ENST00000491722 313 ntBASIC1.62□□□□□ -2.15
SHROOM1Q2M3G4 AC018710.1-201ENST00000506509 158 ntBASIC1.62□□□□□ -2.15
SHROOM1Q2M3G4 RNU1-54P-201ENST00000517181 120 ntBASIC1.62□□□□□ -2.15
SHROOM1Q2M3G4 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.62□□□□□ -2.15
SHROOM1Q2M3G4 MIR4753-201ENST00000585119 83 ntBASIC1.62□□□□□ -2.15
SHROOM1Q2M3G4 AC005786.1-201ENST00000588553 154 ntBASIC1.62□□□□□ -2.15
SHROOM1Q2M3G4 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.62□□□□□ -2.15
SHROOM1Q2M3G4 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.62□□□□□ -2.15
SHROOM1Q2M3G4 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.62□□□□□ -2.15
SHROOM1Q2M3G4 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
SHROOM1Q2M3G4 MIR424-201ENST00000362227 98 ntBASIC1.61□□□□□ -2.15
SHROOM1Q2M3G4 MIR96-201ENST00000362288 78 ntBASIC1.61□□□□□ -2.15
SHROOM1Q2M3G4 SNORD33-201ENST00000362761 85 ntBASIC1.61□□□□□ -2.15
SHROOM1Q2M3G4 Y_RNA.355-201ENST00000365462 98 ntBASIC1.61□□□□□ -2.15
SHROOM1Q2M3G4 MIR518E-201ENST00000385252 88 ntBASIC1.61□□□□□ -2.15
SHROOM1Q2M3G4 RNU1-78P-201ENST00000391248 165 ntBASIC1.61□□□□□ -2.15
SHROOM1Q2M3G4 Y_RNA.599-201ENST00000410489 109 ntBASIC1.61□□□□□ -2.15
SHROOM1Q2M3G4 RNA5SP100-201ENST00000410903 110 ntBASIC1.61□□□□□ -2.15
SHROOM1Q2M3G4 RNA5SP59-201ENST00000410922 110 ntBASIC1.61□□□□□ -2.15
SHROOM1Q2M3G4 RPL21P111-201ENST00000418453 477 ntBASIC1.61□□□□□ -2.15
SHROOM1Q2M3G4 AC007395.1-201ENST00000451333 677 ntBASIC1.61□□□□□ -2.15
SHROOM1Q2M3G4 AC010409.1-201ENST00000487382 476 ntBASIC1.61□□□□□ -2.15
SHROOM1Q2M3G4 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.61□□□□□ -2.15
SHROOM1Q2M3G4 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.61□□□□□ -2.15
SHROOM1Q2M3G4 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.61□□□□□ -2.15
SHROOM1Q2M3G4 SUMO2P18-201ENST00000518873 252 ntBASIC1.61□□□□□ -2.15
SHROOM1Q2M3G4 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.61□□□□□ -2.15
SHROOM1Q2M3G4 UBL5P4-201ENST00000562584 236 ntBASIC1.61□□□□□ -2.15
SHROOM1Q2M3G4 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.61□□□□□ -2.15
SHROOM1Q2M3G4 MIR4742-201ENST00000581069 85 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 169.1 ms