Protein–RNA interactions for Protein: Q16610

ECM1, Extracellular matrix protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1Q16610 RNU4-17P-201ENST00000365598 141 ntBASIC3.78□□□□□ -1.8
ECM1Q16610 RNU6-476P-201ENST00000384726 107 ntBASIC3.78□□□□□ -1.8
ECM1Q16610 RNU6-855P-201ENST00000410395 104 ntBASIC3.78□□□□□ -1.8
ECM1Q16610 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.78□□□□□ -1.8
ECM1Q16610 RPS29P12-201ENST00000460178 152 ntBASIC3.78□□□□□ -1.8
ECM1Q16610 AC080013.2-201ENST00000460866 323 ntBASIC3.78□□□□□ -1.8
ECM1Q16610 HMGN2P9-201ENST00000476875 229 ntBASIC3.78□□□□□ -1.8
ECM1Q16610 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.78□□□□□ -1.8
ECM1Q16610 SNORA25.12-201ENST00000516202 82 ntBASIC3.78□□□□□ -1.8
ECM1Q16610 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.78□□□□□ -1.8
ECM1Q16610 AC109329.2-201ENST00000519658 482 ntBASIC3.78□□□□□ -1.8
ECM1Q16610 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.78□□□□□ -1.8
ECM1Q16610 MIR5582-201ENST00000579697 68 ntBASIC3.78□□□□□ -1.8
ECM1Q16610 MIR5688-201ENST00000580619 83 ntBASIC3.78□□□□□ -1.8
ECM1Q16610 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
ECM1Q16610 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.78□□□□□ -1.8
ECM1Q16610 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
ECM1Q16610 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
ECM1Q16610 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
ECM1Q16610 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.78□□□□□ -1.81
ECM1Q16610 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
ECM1Q16610 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.77□□□□□ -1.81
ECM1Q16610 MIR423-201ENST00000362201 94 ntBASIC3.77□□□□□ -1.81
ECM1Q16610 MIR208A-201ENST00000362287 71 ntBASIC3.77□□□□□ -1.81
ECM1Q16610 RNU1-70P-201ENST00000362618 164 ntBASIC3.77□□□□□ -1.81
ECM1Q16610 RNU6-1144P-201ENST00000384247 104 ntBASIC3.77□□□□□ -1.81
ECM1Q16610 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.77□□□□□ -1.81
ECM1Q16610 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.77□□□□□ -1.81
ECM1Q16610 RNU7-197P-201ENST00000458836 62 ntBASIC3.77□□□□□ -1.81
ECM1Q16610 RNU6-168P-201ENST00000516189 101 ntBASIC3.77□□□□□ -1.81
ECM1Q16610 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.77□□□□□ -1.81
ECM1Q16610 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.77□□□□□ -1.81
ECM1Q16610 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.77□□□□□ -1.81
ECM1Q16610 AC105245.1-201ENST00000581934 244 ntBASIC3.77□□□□□ -1.81
ECM1Q16610 AC090616.3-201ENST00000582184 217 ntBASIC3.77□□□□□ -1.81
ECM1Q16610 MIR7975-201ENST00000619350 68 ntBASIC3.77□□□□□ -1.81
ECM1Q16610 snoZ196.1-201ENST00000625269 89 ntBASIC3.77□□□□□ -1.81
ECM1Q16610 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
ECM1Q16610 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
ECM1Q16610 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
ECM1Q16610 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
ECM1Q16610 RNA5SP50-201ENST00000363731 107 ntBASIC3.76□□□□□ -1.81
ECM1Q16610 Y_RNA.182-201ENST00000363880 111 ntBASIC3.76□□□□□ -1.81
ECM1Q16610 SNORD46.1-201ENST00000364139 104 ntBASIC3.76□□□□□ -1.81
ECM1Q16610 RNU6-275P-201ENST00000364910 107 ntBASIC3.76□□□□□ -1.81
ECM1Q16610 RNU4-11P-201ENST00000365287 132 ntBASIC3.76□□□□□ -1.81
ECM1Q16610 Y_RNA.420-201ENST00000384043 110 ntBASIC3.76□□□□□ -1.81
ECM1Q16610 RNU2-63P-201ENST00000410792 194 ntBASIC3.76□□□□□ -1.81
ECM1Q16610 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.76□□□□□ -1.81
ECM1Q16610 AC008134.1-201ENST00000420943 193 ntBASIC3.76□□□□□ -1.81
ECM1Q16610 Y_RNA.694-201ENST00000516677 117 ntBASIC3.76□□□□□ -1.81
ECM1Q16610 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.76□□□□□ -1.81
ECM1Q16610 AC013791.1-201ENST00000616619 62 ntBASIC3.76□□□□□ -1.81
ECM1Q16610 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.76□□□□□ -1.81
ECM1Q16610 MAPK10-322ENST00000641485 4530 ntBASIC3.75□□□□□ -1.81
ECM1Q16610 Y_RNA.369-201ENST00000365568 117 ntBASIC3.75□□□□□ -1.81
ECM1Q16610 RNU6-144P-201ENST00000383951 107 ntBASIC3.75□□□□□ -1.81
ECM1Q16610 RNU6-1274P-201ENST00000384557 107 ntBASIC3.75□□□□□ -1.81
ECM1Q16610 SNORA8.3-201ENST00000384679 139 ntBASIC3.75□□□□□ -1.81
ECM1Q16610 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
ECM1Q16610 RNU6-763P-201ENST00000390865 106 ntBASIC3.75□□□□□ -1.81
ECM1Q16610 MIR513C-201ENST00000401352 84 ntBASIC3.75□□□□□ -1.81
ECM1Q16610 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.75□□□□□ -1.81
ECM1Q16610 Y_RNA.637-201ENST00000459424 114 ntBASIC3.75□□□□□ -1.81
ECM1Q16610 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.75□□□□□ -1.81
ECM1Q16610 FCF1P8-201ENST00000510322 597 ntBASIC3.75□□□□□ -1.81
ECM1Q16610 AC010598.1-201ENST00000510378 103 ntBASIC3.75□□□□□ -1.81
ECM1Q16610 RNU2-34P-201ENST00000516534 121 ntBASIC3.75□□□□□ -1.81
ECM1Q16610 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.75□□□□□ -1.81
ECM1Q16610 MIR4644-201ENST00000579929 84 ntBASIC3.75□□□□□ -1.81
ECM1Q16610 MIR4425-201ENST00000580572 84 ntBASIC3.75□□□□□ -1.81
ECM1Q16610 MIR3199-1-201ENST00000582434 88 ntBASIC3.75□□□□□ -1.81
ECM1Q16610 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.75□□□□□ -1.81
ECM1Q16610 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.75□□□□□ -1.81
ECM1Q16610 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
ECM1Q16610 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
ECM1Q16610 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.74□□□□□ -1.81
ECM1Q16610 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
ECM1Q16610 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
ECM1Q16610 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
ECM1Q16610 RNU6-103P-201ENST00000363686 107 ntBASIC3.74□□□□□ -1.81
ECM1Q16610 RNA5SP387-201ENST00000364226 106 ntBASIC3.74□□□□□ -1.81
ECM1Q16610 SNORA68.1-201ENST00000364537 132 ntBASIC3.74□□□□□ -1.81
ECM1Q16610 Y_RNA.293-201ENST00000364908 93 ntBASIC3.74□□□□□ -1.81
ECM1Q16610 SNORA22-201ENST00000383907 134 ntBASIC3.74□□□□□ -1.81
ECM1Q16610 RNU6-546P-201ENST00000383991 107 ntBASIC3.74□□□□□ -1.81
ECM1Q16610 RNU6-975P-201ENST00000384296 105 ntBASIC3.74□□□□□ -1.81
ECM1Q16610 MIR218-1-201ENST00000384999 110 ntBASIC3.74□□□□□ -1.81
ECM1Q16610 AL355497.1-201ENST00000406262 551 ntBASIC3.74□□□□□ -1.81
ECM1Q16610 RHEBP3-201ENST00000411920 351 ntBASIC3.74□□□□□ -1.81
ECM1Q16610 AL161788.1-201ENST00000441805 169 ntBASIC3.74□□□□□ -1.81
ECM1Q16610 AC006539.3-201ENST00000454258 129 ntBASIC3.74□□□□□ -1.81
ECM1Q16610 MIR4431-201ENST00000579990 94 ntBASIC3.74□□□□□ -1.81
ECM1Q16610 DNAJC19P2-201ENST00000593340 302 ntBASIC3.74□□□□□ -1.81
ECM1Q16610 AC110741.2-201ENST00000605278 268 ntBASIC3.74□□□□□ -1.81
ECM1Q16610 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.74□□□□□ -1.81
ECM1Q16610 AC012314.7-201ENST00000619693 93 ntBASIC3.74□□□□□ -1.81
ECM1Q16610 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
ECM1Q16610 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
ECM1Q16610 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms