Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 AL356010.1-201ENST00000456364 102 ntBASIC0.47□□□□□ -2.33
HOXC5Q00444 RPS27P22-201ENST00000478056 241 ntBASIC0.47□□□□□ -2.33
HOXC5Q00444 BET1P1-201ENST00000482276 359 ntBASIC0.47□□□□□ -2.33
HOXC5Q00444 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC0.47□□□□□ -2.33
HOXC5Q00444 AC079140.5-201ENST00000507882 310 ntBASIC0.47□□□□□ -2.33
HOXC5Q00444 MTND1P22-201ENST00000510572 951 ntBASIC0.47□□□□□ -2.33
HOXC5Q00444 RNU1-117P-201ENST00000517041 158 ntBASIC0.47□□□□□ -2.33
HOXC5Q00444 RNU7-128P-201ENST00000517247 62 ntBASIC0.47□□□□□ -2.33
HOXC5Q00444 HIF1AP1-201ENST00000553642 175 ntBASIC0.47□□□□□ -2.33
HOXC5Q00444 SUB1P2-201ENST00000556401 297 ntBASIC0.47□□□□□ -2.33
HOXC5Q00444 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.47□□□□□ -2.33
HOXC5Q00444 MIR4452-201ENST00000583004 71 ntBASIC0.47□□□□□ -2.33
HOXC5Q00444 AC024933.1-201ENST00000608472 348 ntBASIC0.47□□□□□ -2.33
HOXC5Q00444 AC022960.3-201ENST00000619794 441 ntBASIC0.47□□□□□ -2.33
HOXC5Q00444 AL513423.1-201ENST00000621695 132 ntBASIC0.47□□□□□ -2.33
HOXC5Q00444 AC008873.1-201ENST00000625051 138 ntBASIC0.47□□□□□ -2.33
HOXC5Q00444 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
HOXC5Q00444 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
HOXC5Q00444 RNU6-227P-201ENST00000362865 103 ntBASIC0.46□□□□□ -2.34
HOXC5Q00444 MIR586-201ENST00000385035 97 ntBASIC0.46□□□□□ -2.34
HOXC5Q00444 MIR450B-201ENST00000401182 78 ntBASIC0.46□□□□□ -2.34
HOXC5Q00444 MRPL42P3-201ENST00000401492 326 ntBASIC0.46□□□□□ -2.34
HOXC5Q00444 RNA5SP504-201ENST00000410676 117 ntBASIC0.46□□□□□ -2.34
HOXC5Q00444 SNRPFP3-201ENST00000457792 225 ntBASIC0.46□□□□□ -2.34
HOXC5Q00444 AC022364.2-201ENST00000457963 554 ntBASIC0.46□□□□□ -2.34
HOXC5Q00444 RNU7-138P-201ENST00000459479 64 ntBASIC0.46□□□□□ -2.34
HOXC5Q00444 AF186996.7-201ENST00000492781 209 ntBASIC0.46□□□□□ -2.34
HOXC5Q00444 RNA5SP255-201ENST00000516370 107 ntBASIC0.46□□□□□ -2.34
HOXC5Q00444 AC025647.1-201ENST00000517879 253 ntBASIC0.46□□□□□ -2.34
HOXC5Q00444 MRPS36P4-201ENST00000534436 298 ntBASIC0.46□□□□□ -2.34
HOXC5Q00444 MIR3941-201ENST00000582572 103 ntBASIC0.46□□□□□ -2.34
HOXC5Q00444 AC064836.2-201ENST00000609491 462 ntBASIC0.46□□□□□ -2.34
HOXC5Q00444 U2.17-201ENST00000611454 95 ntBASIC0.46□□□□□ -2.34
HOXC5Q00444 RMST_3.1-201ENST00000611651 109 ntBASIC0.46□□□□□ -2.34
HOXC5Q00444 HULC.1-201ENST00000612720 240 ntBASIC0.46□□□□□ -2.34
HOXC5Q00444 AC122133.1-201ENST00000613964 233 ntBASIC0.46□□□□□ -2.34
HOXC5Q00444 AC073349.3-201ENST00000617616 186 ntBASIC0.46□□□□□ -2.34
HOXC5Q00444 AC007494.3-201ENST00000624660 743 ntBASIC0.46□□□□□ -2.34
HOXC5Q00444 AL078596.1-201ENST00000624856 447 ntBASIC0.46□□□□□ -2.34
HOXC5Q00444 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
HOXC5Q00444 AP000568.1-201ENST00000282964 442 ntBASIC0.45□□□□□ -2.34
HOXC5Q00444 RNU6-199P-201ENST00000362954 107 ntBASIC0.45□□□□□ -2.34
HOXC5Q00444 RNU6-517P-201ENST00000384362 110 ntBASIC0.45□□□□□ -2.34
HOXC5Q00444 MIR487A-201ENST00000385009 80 ntBASIC0.45□□□□□ -2.34
HOXC5Q00444 MT-TH-201ENST00000387441 69 ntBASIC0.45□□□□□ -2.34
HOXC5Q00444 SNORA75.2-201ENST00000391138 150 ntBASIC0.45□□□□□ -2.34
HOXC5Q00444 SNORA75.3-201ENST00000391231 150 ntBASIC0.45□□□□□ -2.34
HOXC5Q00444 SNORA26.8-201ENST00000391306 124 ntBASIC0.45□□□□□ -2.34
HOXC5Q00444 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.45□□□□□ -2.34
HOXC5Q00444 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.45□□□□□ -2.34
HOXC5Q00444 AL358934.1-201ENST00000432346 324 ntBASIC0.45□□□□□ -2.34
HOXC5Q00444 MTND4P32-201ENST00000437189 1237 ntBASIC0.45□□□□□ -2.34
HOXC5Q00444 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.45□□□□□ -2.34
HOXC5Q00444 SNRPGP9-201ENST00000456025 225 ntBASIC0.45□□□□□ -2.34
HOXC5Q00444 AC007215.1-201ENST00000464893 276 ntBASIC0.45□□□□□ -2.34
HOXC5Q00444 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.45□□□□□ -2.34
HOXC5Q00444 AC010493.1-201ENST00000513479 292 ntBASIC0.45□□□□□ -2.34
HOXC5Q00444 RNA5SP454-201ENST00000517231 127 ntBASIC0.45□□□□□ -2.34
HOXC5Q00444 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
HOXC5Q00444 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.45□□□□□ -2.34
HOXC5Q00444 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.45□□□□□ -2.34
HOXC5Q00444 MIR4424-201ENST00000585257 86 ntBASIC0.45□□□□□ -2.34
HOXC5Q00444 AL353765.1-201ENST00000605514 183 ntBASIC0.45□□□□□ -2.34
HOXC5Q00444 AC068787.1-201ENST00000623908 691 ntBASIC0.45□□□□□ -2.34
HOXC5Q00444 snoZ196.1-201ENST00000625269 89 ntBASIC0.45□□□□□ -2.34
HOXC5Q00444 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.45□□□□□ -2.34
HOXC5Q00444 RNU6-1317P-201ENST00000364582 104 ntBASIC0.44□□□□□ -2.34
HOXC5Q00444 RNU6-1240P-201ENST00000365155 104 ntBASIC0.44□□□□□ -2.34
HOXC5Q00444 RNU6-1335P-201ENST00000365426 107 ntBASIC0.44□□□□□ -2.34
HOXC5Q00444 RNU6-1286P-201ENST00000383871 107 ntBASIC0.44□□□□□ -2.34
HOXC5Q00444 RNA5SP219-201ENST00000390940 113 ntBASIC0.44□□□□□ -2.34
HOXC5Q00444 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
HOXC5Q00444 MTATP6P18-201ENST00000417994 673 ntBASIC0.44□□□□□ -2.34
HOXC5Q00444 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC0.44□□□□□ -2.34
HOXC5Q00444 AL365203.2-201ENST00000423444 196 ntBASIC0.44□□□□□ -2.34
HOXC5Q00444 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC0.44□□□□□ -2.34
HOXC5Q00444 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.44□□□□□ -2.34
HOXC5Q00444 AL445567.1-201ENST00000439121 144 ntBASIC0.44□□□□□ -2.34
HOXC5Q00444 MTCO3P18-201ENST00000440206 761 ntBASIC0.44□□□□□ -2.34
HOXC5Q00444 RPEP5-201ENST00000441137 268 ntBASIC0.44□□□□□ -2.34
HOXC5Q00444 STAG3L5P-204ENST00000443759 179 ntBASIC0.44□□□□□ -2.34
HOXC5Q00444 AC073415.1-201ENST00000449240 153 ntBASIC0.44□□□□□ -2.34
HOXC5Q00444 ZNF736P8Y-201ENST00000451913 669 ntBASIC0.44□□□□□ -2.34
HOXC5Q00444 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.44□□□□□ -2.34
HOXC5Q00444 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.44□□□□□ -2.34
HOXC5Q00444 COX6CP6-201ENST00000490840 228 ntBASIC0.44□□□□□ -2.34
HOXC5Q00444 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC0.44□□□□□ -2.34
HOXC5Q00444 SNORA14.1-201ENST00000516113 141 ntBASIC0.44□□□□□ -2.34
HOXC5Q00444 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.44□□□□□ -2.34
HOXC5Q00444 RNU6-917P-201ENST00000516294 104 ntBASIC0.44□□□□□ -2.34
HOXC5Q00444 RNU6-229P-201ENST00000516614 102 ntBASIC0.44□□□□□ -2.34
HOXC5Q00444 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0.44□□□□□ -2.34
HOXC5Q00444 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.44□□□□□ -2.34
HOXC5Q00444 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.44□□□□□ -2.34
HOXC5Q00444 SCARNA4-201ENST00000629045 128 ntBASIC0.44□□□□□ -2.34
HOXC5Q00444 Y_RNA.201-201ENST00000364052 96 ntBASIC0.43□□□□□ -2.34
HOXC5Q00444 SNORA25.9-201ENST00000365087 128 ntBASIC0.43□□□□□ -2.34
HOXC5Q00444 RNU6-996P-201ENST00000365438 107 ntBASIC0.43□□□□□ -2.34
HOXC5Q00444 RNY3P10-201ENST00000384764 102 ntBASIC0.43□□□□□ -2.34
HOXC5Q00444 MIR10B-201ENST00000385011 110 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms