Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
GABREP78334 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.08□□□□□ -1.92
GABREP78334 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
GABREP78334 AL513302.2-201ENST00000562313 1842 ntBASIC3.07□□□□□ -1.92
GABREP78334 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
GABREP78334 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
GABREP78334 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
GABREP78334 RNU1-109P-201ENST00000383960 147 ntBASIC3.07□□□□□ -1.92
GABREP78334 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.07□□□□□ -1.92
GABREP78334 AC091826.1-201ENST00000514065 313 ntBASIC3.07□□□□□ -1.92
GABREP78334 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.07□□□□□ -1.92
GABREP78334 SNORA27.4-201ENST00000516650 95 ntBASIC3.07□□□□□ -1.92
GABREP78334 RNA5SP490-201ENST00000517141 136 ntBASIC3.07□□□□□ -1.92
GABREP78334 RN7SKP40-201ENST00000517211 242 ntBASIC3.07□□□□□ -1.92
GABREP78334 AL162424.1-201ENST00000602325 221 ntBASIC3.07□□□□□ -1.92
GABREP78334 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.07□□□□□ -1.92
GABREP78334 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.07□□□□□ -1.92
GABREP78334 AL035425.3-201ENST00000564206 4996 ntBASIC3.07□□□□□ -1.92
GABREP78334 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.06□□□□□ -1.92
GABREP78334 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
GABREP78334 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
GABREP78334 Y_RNA.275-201ENST00000364726 110 ntBASIC3.06□□□□□ -1.92
GABREP78334 AL139095.1-201ENST00000404326 391 ntBASIC3.06□□□□□ -1.92
GABREP78334 AL357139.1-201ENST00000407792 426 ntBASIC3.06□□□□□ -1.92
GABREP78334 MIR1185-2-201ENST00000408687 86 ntBASIC3.06□□□□□ -1.92
GABREP78334 AL139281.1-201ENST00000422120 335 ntBASIC3.06□□□□□ -1.92
GABREP78334 AC092427.1-202ENST00000430569 476 ntBASIC3.06□□□□□ -1.92
GABREP78334 HMGN2P18-201ENST00000450680 270 ntBASIC3.06□□□□□ -1.92
GABREP78334 EEF1B2P7-201ENST00000451177 676 ntBASIC3.06□□□□□ -1.92
GABREP78334 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.06□□□□□ -1.92
GABREP78334 RNU6-436P-201ENST00000516171 114 ntBASIC3.06□□□□□ -1.92
GABREP78334 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.06□□□□□ -1.92
GABREP78334 UBL5P2-201ENST00000583788 219 ntBASIC3.06□□□□□ -1.92
GABREP78334 AC009487.2-201ENST00000420969 6821 ntBASIC3.05□□□□□ -1.92
GABREP78334 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.05□□□□□ -1.92
GABREP78334 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.05□□□□□ -1.92
GABREP78334 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.05□□□□□ -1.92
GABREP78334 RNU1-70P-201ENST00000362618 164 ntBASIC3.05□□□□□ -1.92
GABREP78334 SNORD115-30-201ENST00000364117 82 ntBASIC3.05□□□□□ -1.92
GABREP78334 SNORD14D-201ENST00000384390 87 ntBASIC3.05□□□□□ -1.92
GABREP78334 SNORD58.1-201ENST00000391313 66 ntBASIC3.05□□□□□ -1.92
GABREP78334 Y_RNA.590-201ENST00000410140 107 ntBASIC3.05□□□□□ -1.92
GABREP78334 RN7SKP284-201ENST00000411002 343 ntBASIC3.05□□□□□ -1.92
GABREP78334 RN7SKP58-201ENST00000411010 305 ntBASIC3.05□□□□□ -1.92
GABREP78334 RNU2-14P-201ENST00000411053 191 ntBASIC3.05□□□□□ -1.92
GABREP78334 AC024067.1-201ENST00000426199 223 ntBASIC3.05□□□□□ -1.92
GABREP78334 AC022018.1-201ENST00000430685 241 ntBASIC3.05□□□□□ -1.92
GABREP78334 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
GABREP78334 RNU6-191P-201ENST00000516295 94 ntBASIC3.05□□□□□ -1.92
GABREP78334 Y_RNA.679-201ENST00000516416 91 ntBASIC3.05□□□□□ -1.92
GABREP78334 AC107934.2-201ENST00000518653 310 ntBASIC3.05□□□□□ -1.92
GABREP78334 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.05□□□□□ -1.92
GABREP78334 AC090616.3-201ENST00000582184 217 ntBASIC3.05□□□□□ -1.92
GABREP78334 AC009779.6-201ENST00000603972 165 ntBASIC3.05□□□□□ -1.92
GABREP78334 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.05□□□□□ -1.92
GABREP78334 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.05□□□□□ -1.92
GABREP78334 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
GABREP78334 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
GABREP78334 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
GABREP78334 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
GABREP78334 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
GABREP78334 UBE2WP1-201ENST00000362030 340 ntBASIC3.04□□□□□ -1.92
GABREP78334 Y_RNA.117-201ENST00000363294 101 ntBASIC3.04□□□□□ -1.92
GABREP78334 RNU6-200P-201ENST00000364743 107 ntBASIC3.04□□□□□ -1.92
GABREP78334 RNA5SP125-201ENST00000364843 120 ntBASIC3.04□□□□□ -1.92
GABREP78334 RNA5SP126-201ENST00000365092 109 ntBASIC3.04□□□□□ -1.92
GABREP78334 RNU6-662P-201ENST00000384253 104 ntBASIC3.04□□□□□ -1.92
GABREP78334 RNU6-975P-201ENST00000384296 105 ntBASIC3.04□□□□□ -1.92
GABREP78334 RNU6-1289P-201ENST00000384431 106 ntBASIC3.04□□□□□ -1.92
GABREP78334 MIR561-201ENST00000385216 97 ntBASIC3.04□□□□□ -1.92
GABREP78334 MT-TR-201ENST00000387439 65 ntBASIC3.04□□□□□ -1.92
GABREP78334 AL031003.1-201ENST00000404229 172 ntBASIC3.04□□□□□ -1.92
GABREP78334 AC003685.2-201ENST00000422795 395 ntBASIC3.04□□□□□ -1.92
GABREP78334 AL445687.1-201ENST00000439946 251 ntBASIC3.04□□□□□ -1.92
GABREP78334 AC016717.1-201ENST00000448918 286 ntBASIC3.04□□□□□ -1.92
GABREP78334 RNU6-138P-201ENST00000515952 107 ntBASIC3.04□□□□□ -1.92
GABREP78334 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.04□□□□□ -1.92
GABREP78334 uc_338.1-201ENST00000612113 180 ntBASIC3.04□□□□□ -1.92
GABREP78334 AL442067.1-201ENST00000613261 223 ntBASIC3.04□□□□□ -1.92
GABREP78334 snoZ196.1-201ENST00000625269 89 ntBASIC3.04□□□□□ -1.92
GABREP78334 U6.115-201ENST00000636045 103 ntBASIC3.04□□□□□ -1.92
GABREP78334 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
GABREP78334 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
GABREP78334 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
GABREP78334 AC017071.1-201ENST00000564407 2204 ntBASIC3.03□□□□□ -1.92
GABREP78334 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
GABREP78334 MIR449A-201ENST00000362113 91 ntBASIC3.03□□□□□ -1.92
GABREP78334 Y_RNA.76-201ENST00000362931 109 ntBASIC3.03□□□□□ -1.92
GABREP78334 Y_RNA.243-201ENST00000364481 109 ntBASIC3.03□□□□□ -1.92
GABREP78334 SNORA71.1-201ENST00000364523 117 ntBASIC3.03□□□□□ -1.92
GABREP78334 SNORA7.4-201ENST00000384249 137 ntBASIC3.03□□□□□ -1.92
GABREP78334 RNU6-1248P-201ENST00000391096 64 ntBASIC3.03□□□□□ -1.92
GABREP78334 RNU2-61P-201ENST00000411069 191 ntBASIC3.03□□□□□ -1.92
GABREP78334 RNU6-57P-201ENST00000411348 103 ntBASIC3.03□□□□□ -1.92
GABREP78334 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.03□□□□□ -1.92
GABREP78334 MTND5P15-201ENST00000434246 349 ntBASIC3.03□□□□□ -1.92
GABREP78334 AC016925.1-201ENST00000458303 298 ntBASIC3.03□□□□□ -1.92
GABREP78334 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
GABREP78334 AC130289.1-201ENST00000577321 73 ntBASIC3.03□□□□□ -1.92
GABREP78334 MIR2682-201ENST00000580305 110 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms