Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 AP000568.1-201ENST00000282964 442 ntBASIC0.42□□□□□ -2.34
AP1S1P61966 RNU6-1240P-201ENST00000365155 104 ntBASIC0.42□□□□□ -2.34
AP1S1P61966 RNU6-606P-201ENST00000384721 111 ntBASIC0.42□□□□□ -2.34
AP1S1P61966 MIR450B-201ENST00000401182 78 ntBASIC0.42□□□□□ -2.34
AP1S1P61966 RNU2-9P-201ENST00000410194 145 ntBASIC0.42□□□□□ -2.34
AP1S1P61966 CDK8P2-201ENST00000415020 547 ntBASIC0.42□□□□□ -2.34
AP1S1P61966 BX295541.1-201ENST00000417774 250 ntBASIC0.42□□□□□ -2.34
AP1S1P61966 AL445305.1-201ENST00000432577 575 ntBASIC0.42□□□□□ -2.34
AP1S1P61966 AC093850.1-201ENST00000454121 251 ntBASIC0.42□□□□□ -2.34
AP1S1P61966 TPT1P7-201ENST00000458300 517 ntBASIC0.42□□□□□ -2.34
AP1S1P61966 SRRM1P2-201ENST00000464531 1192 ntBASIC0.42□□□□□ -2.34
AP1S1P61966 AF186996.7-201ENST00000492781 209 ntBASIC0.42□□□□□ -2.34
AP1S1P61966 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.42□□□□□ -2.34
AP1S1P61966 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.42□□□□□ -2.34
AP1S1P61966 AC026470.2-201ENST00000561492 181 ntBASIC0.42□□□□□ -2.34
AP1S1P61966 AC068790.2-201ENST00000602601 557 ntBASIC0.42□□□□□ -2.34
AP1S1P61966 PRELID3BP2-201ENST00000605362 201 ntBASIC0.42□□□□□ -2.34
AP1S1P61966 AC064836.2-201ENST00000609491 462 ntBASIC0.42□□□□□ -2.34
AP1S1P61966 AC104465.1-201ENST00000611365 139 ntBASIC0.42□□□□□ -2.34
AP1S1P61966 AC073349.3-201ENST00000617616 186 ntBASIC0.42□□□□□ -2.34
AP1S1P61966 AC022306.3-201ENST00000619930 550 ntBASIC0.42□□□□□ -2.34
AP1S1P61966 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.42□□□□□ -2.34
AP1S1P61966 RNU6-227P-201ENST00000362865 103 ntBASIC0.41□□□□□ -2.34
AP1S1P61966 RNU6-456P-201ENST00000384493 107 ntBASIC0.41□□□□□ -2.34
AP1S1P61966 SNORA40.3-201ENST00000390964 122 ntBASIC0.41□□□□□ -2.34
AP1S1P61966 RNU6-903P-201ENST00000391270 109 ntBASIC0.41□□□□□ -2.34
AP1S1P61966 RPS26P42-201ENST00000413485 326 ntBASIC0.41□□□□□ -2.34
AP1S1P61966 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.41□□□□□ -2.34
AP1S1P61966 RPEP5-201ENST00000441137 268 ntBASIC0.41□□□□□ -2.34
AP1S1P61966 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.41□□□□□ -2.34
AP1S1P61966 RNU6-221P-201ENST00000459541 99 ntBASIC0.41□□□□□ -2.34
AP1S1P61966 AC007215.1-201ENST00000464893 276 ntBASIC0.41□□□□□ -2.34
AP1S1P61966 AC005178.1-201ENST00000508392 440 ntBASIC0.41□□□□□ -2.34
AP1S1P61966 AC010493.1-201ENST00000513479 292 ntBASIC0.41□□□□□ -2.34
AP1S1P61966 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.41□□□□□ -2.34
AP1S1P61966 RNU1-117P-201ENST00000517041 158 ntBASIC0.41□□□□□ -2.34
AP1S1P61966 AC069113.1-201ENST00000517763 267 ntBASIC0.41□□□□□ -2.34
AP1S1P61966 AP002001.1-203ENST00000534002 267 ntBASIC0.41□□□□□ -2.34
AP1S1P61966 APOOP3-201ENST00000536787 586 ntBASIC0.41□□□□□ -2.34
AP1S1P61966 AC090049.2-201ENST00000550377 109 ntBASIC0.41□□□□□ -2.34
AP1S1P61966 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.41□□□□□ -2.34
AP1S1P61966 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.41□□□□□ -2.34
AP1S1P61966 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.4□□□□□ -2.34
AP1S1P61966 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
AP1S1P61966 RNU6-199P-201ENST00000362954 107 ntBASIC0.4□□□□□ -2.35
AP1S1P61966 RNY1-201ENST00000364228 113 ntBASIC0.4□□□□□ -2.35
AP1S1P61966 RNU6-1286P-201ENST00000383871 107 ntBASIC0.4□□□□□ -2.35
AP1S1P61966 RNU6-110P-201ENST00000384508 104 ntBASIC0.4□□□□□ -2.35
AP1S1P61966 Y_RNA.560-201ENST00000384689 102 ntBASIC0.4□□□□□ -2.35
AP1S1P61966 AL034345.1-201ENST00000407768 123 ntBASIC0.4□□□□□ -2.35
AP1S1P61966 RNA5SP193-201ENST00000410353 107 ntBASIC0.4□□□□□ -2.35
AP1S1P61966 CALM2P4-201ENST00000430810 426 ntBASIC0.4□□□□□ -2.35
AP1S1P61966 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.4□□□□□ -2.35
AP1S1P61966 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
AP1S1P61966 MTND2P14-201ENST00000482139 351 ntBASIC0.4□□□□□ -2.35
AP1S1P61966 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.4□□□□□ -2.35
AP1S1P61966 MTND3P3-201ENST00000505004 126 ntBASIC0.4□□□□□ -2.35
AP1S1P61966 RNA5SP454-201ENST00000517231 127 ntBASIC0.4□□□□□ -2.35
AP1S1P61966 AC016256.1-201ENST00000547971 354 ntBASIC0.4□□□□□ -2.35
AP1S1P61966 AK6P2-201ENST00000549020 471 ntBASIC0.4□□□□□ -2.35
AP1S1P61966 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.4□□□□□ -2.35
AP1S1P61966 MIR3682-201ENST00000581338 84 ntBASIC0.4□□□□□ -2.35
AP1S1P61966 AC025449.1-201ENST00000603896 529 ntBASIC0.4□□□□□ -2.35
AP1S1P61966 uc_338.11-201ENST00000619132 160 ntBASIC0.4□□□□□ -2.35
AP1S1P61966 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.4□□□□□ -2.35
AP1S1P61966 AL078596.1-201ENST00000624856 447 ntBASIC0.4□□□□□ -2.35
AP1S1P61966 SCARNA4-201ENST00000629045 128 ntBASIC0.4□□□□□ -2.35
AP1S1P61966 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.39□□□□□ -2.35
AP1S1P61966 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
AP1S1P61966 RNU6-181P-201ENST00000363225 107 ntBASIC0.39□□□□□ -2.35
AP1S1P61966 Y_RNA.123-201ENST00000363338 102 ntBASIC0.39□□□□□ -2.35
AP1S1P61966 RNU6-1317P-201ENST00000364582 104 ntBASIC0.39□□□□□ -2.35
AP1S1P61966 SNORA50A-201ENST00000384225 134 ntBASIC0.39□□□□□ -2.35
AP1S1P61966 MIR598-201ENST00000384868 97 ntBASIC0.39□□□□□ -2.35
AP1S1P61966 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.39□□□□□ -2.35
AP1S1P61966 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.39□□□□□ -2.35
AP1S1P61966 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.39□□□□□ -2.35
AP1S1P61966 STAG3L5P-204ENST00000443759 179 ntBASIC0.39□□□□□ -2.35
AP1S1P61966 USP9YP29-201ENST00000445112 563 ntBASIC0.39□□□□□ -2.35
AP1S1P61966 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.39□□□□□ -2.35
AP1S1P61966 AL049830.1-201ENST00000468034 425 ntBASIC0.39□□□□□ -2.35
AP1S1P61966 CCDC34P1-201ENST00000507441 517 ntBASIC0.39□□□□□ -2.35
AP1S1P61966 RNU6-445P-201ENST00000516949 107 ntBASIC0.39□□□□□ -2.35
AP1S1P61966 AL137161.1-201ENST00000532231 390 ntBASIC0.39□□□□□ -2.35
AP1S1P61966 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC0.39□□□□□ -2.35
AP1S1P61966 AC004584.2-201ENST00000570407 410 ntBASIC0.39□□□□□ -2.35
AP1S1P61966 AC092354.1-201ENST00000606057 376 ntBASIC0.39□□□□□ -2.35
AP1S1P61966 AP001596.2-201ENST00000608410 312 ntBASIC0.39□□□□□ -2.35
AP1S1P61966 AL096861.1-201ENST00000610899 123 ntBASIC0.39□□□□□ -2.35
AP1S1P61966 AC243829.6-201ENST00000612652 106 ntBASIC0.39□□□□□ -2.35
AP1S1P61966 U6.73-201ENST00000619194 103 ntBASIC0.39□□□□□ -2.35
AP1S1P61966 AC068792.1-201ENST00000621354 417 ntBASIC0.39□□□□□ -2.35
AP1S1P61966 AC008873.1-201ENST00000625051 138 ntBASIC0.39□□□□□ -2.35
AP1S1P61966 AL589743.1-201ENST00000551932 2712 ntBASIC0.38□□□□□ -2.35
AP1S1P61966 ZNF204P-201ENST00000416749 2397 ntBASIC0.38□□□□□ -2.35
AP1S1P61966 MTND4P5-201ENST00000435821 1374 ntBASIC0.38□□□□□ -2.35
AP1S1P61966 RNU4-28P-201ENST00000364739 141 ntBASIC0.38□□□□□ -2.35
AP1S1P61966 SNORD87-201ENST00000364849 89 ntBASIC0.38□□□□□ -2.35
AP1S1P61966 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.38□□□□□ -2.35
AP1S1P61966 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms