Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 RNU6-1031P-201ENST00000384773 107 ntBASIC0.97□□□□□ -2.25
EIF3EP60228 MIR521-1-201ENST00000384902 87 ntBASIC0.97□□□□□ -2.25
EIF3EP60228 MIR222-201ENST00000384992 110 ntBASIC0.97□□□□□ -2.25
EIF3EP60228 RNU6-648P-201ENST00000410190 107 ntBASIC0.97□□□□□ -2.25
EIF3EP60228 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC0.97□□□□□ -2.25
EIF3EP60228 POLR2J4-204ENST00000418424 324 ntBASIC0.97□□□□□ -2.25
EIF3EP60228 Z82205.1-201ENST00000428456 297 ntBASIC0.97□□□□□ -2.25
EIF3EP60228 MTND3P16-201ENST00000452205 344 ntBASIC0.97□□□□□ -2.25
EIF3EP60228 TPT1P7-201ENST00000458300 517 ntBASIC0.97□□□□□ -2.25
EIF3EP60228 AL163540.1-201ENST00000485382 386 ntBASIC0.97□□□□□ -2.25
EIF3EP60228 RNU6-165P-201ENST00000517170 99 ntBASIC0.97□□□□□ -2.25
EIF3EP60228 MTND1P5-201ENST00000517906 940 ntBASIC0.97□□□□□ -2.25
EIF3EP60228 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.97□□□□□ -2.25
EIF3EP60228 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.97□□□□□ -2.25
EIF3EP60228 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.97□□□□□ -2.25
EIF3EP60228 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.97□□□□□ -2.25
EIF3EP60228 AC097065.2-201ENST00000608159 533 ntBASIC0.97□□□□□ -2.25
EIF3EP60228 AL133215.3-201ENST00000609801 448 ntBASIC0.97□□□□□ -2.25
EIF3EP60228 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.97□□□□□ -2.25
EIF3EP60228 SNORD115-8-201ENST00000363856 82 ntBASIC0.96□□□□□ -2.26
EIF3EP60228 RNU6-522P-201ENST00000364497 107 ntBASIC0.96□□□□□ -2.26
EIF3EP60228 RNU6-1187P-201ENST00000364771 110 ntBASIC0.96□□□□□ -2.26
EIF3EP60228 SNORD115-38-201ENST00000365037 82 ntBASIC0.96□□□□□ -2.26
EIF3EP60228 RNU6-1240P-201ENST00000365155 104 ntBASIC0.96□□□□□ -2.26
EIF3EP60228 RNA5SP323-201ENST00000391094 133 ntBASIC0.96□□□□□ -2.26
EIF3EP60228 MIR320B2-201ENST00000408479 138 ntBASIC0.96□□□□□ -2.26
EIF3EP60228 AC008134.1-201ENST00000420943 193 ntBASIC0.96□□□□□ -2.26
EIF3EP60228 AC010154.1-201ENST00000425857 269 ntBASIC0.96□□□□□ -2.26
EIF3EP60228 RPL39P38-201ENST00000467018 153 ntBASIC0.96□□□□□ -2.26
EIF3EP60228 COX6CP14-201ENST00000469580 174 ntBASIC0.96□□□□□ -2.26
EIF3EP60228 RNA5SP458-201ENST00000516188 119 ntBASIC0.96□□□□□ -2.26
EIF3EP60228 RNU6-1332P-201ENST00000516666 104 ntBASIC0.96□□□□□ -2.26
EIF3EP60228 SUMO2P16-201ENST00000519475 264 ntBASIC0.96□□□□□ -2.26
EIF3EP60228 OSBPL9P5-201ENST00000542581 171 ntBASIC0.96□□□□□ -2.26
EIF3EP60228 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.96□□□□□ -2.26
EIF3EP60228 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.96□□□□□ -2.26
EIF3EP60228 AC146944.4-201ENST00000602697 718 ntBASIC0.96□□□□□ -2.26
EIF3EP60228 snoU13.31-201ENST00000607291 104 ntBASIC0.96□□□□□ -2.26
EIF3EP60228 AL021879.1-201ENST00000611756 288 ntBASIC0.96□□□□□ -2.26
EIF3EP60228 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.96□□□□□ -2.26
EIF3EP60228 AC073534.2-201ENST00000620377 381 ntBASIC0.96□□□□□ -2.26
EIF3EP60228 AC068792.1-201ENST00000621354 417 ntBASIC0.96□□□□□ -2.26
EIF3EP60228 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.96□□□□□ -2.26
EIF3EP60228 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.95□□□□□ -2.26
EIF3EP60228 Y_RNA.77-201ENST00000362962 107 ntBASIC0.95□□□□□ -2.26
EIF3EP60228 SNORD50.1-201ENST00000362987 71 ntBASIC0.95□□□□□ -2.26
EIF3EP60228 SNORD113-7-201ENST00000363762 77 ntBASIC0.95□□□□□ -2.26
EIF3EP60228 Y_RNA.359-201ENST00000365498 102 ntBASIC0.95□□□□□ -2.26
EIF3EP60228 RNU6-245P-201ENST00000384020 107 ntBASIC0.95□□□□□ -2.26
EIF3EP60228 SNORA12.1-201ENST00000390873 148 ntBASIC0.95□□□□□ -2.26
EIF3EP60228 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
EIF3EP60228 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.95□□□□□ -2.26
EIF3EP60228 AC079354.2-201ENST00000453523 154 ntBASIC0.95□□□□□ -2.26
EIF3EP60228 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.95□□□□□ -2.26
EIF3EP60228 AC010424.1-201ENST00000506336 297 ntBASIC0.95□□□□□ -2.26
EIF3EP60228 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.95□□□□□ -2.26
EIF3EP60228 RNU1-142P-201ENST00000516682 145 ntBASIC0.95□□□□□ -2.26
EIF3EP60228 RNU7-128P-201ENST00000517247 62 ntBASIC0.95□□□□□ -2.26
EIF3EP60228 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.95□□□□□ -2.26
EIF3EP60228 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.95□□□□□ -2.26
EIF3EP60228 MIR4769-201ENST00000584126 77 ntBASIC0.95□□□□□ -2.26
EIF3EP60228 AL359075.3-201ENST00000613288 217 ntBASIC0.95□□□□□ -2.26
EIF3EP60228 AC068647.2-201ENST00000637380 353 ntBASIC0.95□□□□□ -2.26
EIF3EP60228 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
EIF3EP60228 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.94□□□□□ -2.26
EIF3EP60228 Y_RNA.409-201ENST00000383990 98 ntBASIC0.94□□□□□ -2.26
EIF3EP60228 DEFB108C-201ENST00000400154 252 ntBASIC0.94□□□□□ -2.26
EIF3EP60228 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.94□□□□□ -2.26
EIF3EP60228 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.94□□□□□ -2.26
EIF3EP60228 RNA5SP54-201ENST00000516951 92 ntBASIC0.94□□□□□ -2.26
EIF3EP60228 AC016957.1-201ENST00000534895 309 ntBASIC0.94□□□□□ -2.26
EIF3EP60228 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.94□□□□□ -2.26
EIF3EP60228 SNORD11B-201ENST00000607707 90 ntBASIC0.94□□□□□ -2.26
EIF3EP60228 MIR8054-201ENST00000620877 86 ntBASIC0.94□□□□□ -2.26
EIF3EP60228 Y_RNA.481-201ENST00000384373 102 ntBASIC0.93□□□□□ -2.26
EIF3EP60228 RNU6-933P-201ENST00000384424 107 ntBASIC0.93□□□□□ -2.26
EIF3EP60228 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.93□□□□□ -2.26
EIF3EP60228 AC005002.2-201ENST00000438228 269 ntBASIC0.93□□□□□ -2.26
EIF3EP60228 RNU1-117P-201ENST00000517041 158 ntBASIC0.93□□□□□ -2.26
EIF3EP60228 SNORA70.22-201ENST00000517160 124 ntBASIC0.93□□□□□ -2.26
EIF3EP60228 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.93□□□□□ -2.26
EIF3EP60228 AK6P2-201ENST00000549020 471 ntBASIC0.93□□□□□ -2.26
EIF3EP60228 AC026371.1-201ENST00000551867 419 ntBASIC0.93□□□□□ -2.26
EIF3EP60228 AC006362.1-201ENST00000567392 174 ntBASIC0.93□□□□□ -2.26
EIF3EP60228 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.93□□□□□ -2.26
EIF3EP60228 AC078883.4-201ENST00000623218 367 ntBASIC0.93□□□□□ -2.26
EIF3EP60228 AC090582.1-201ENST00000636321 199 ntBASIC0.93□□□□□ -2.26
EIF3EP60228 ELL2P3-201ENST00000457883 1602 ntBASIC0.93□□□□□ -2.26
EIF3EP60228 Y_RNA.231-201ENST00000364358 102 ntBASIC0.92□□□□□ -2.26
EIF3EP60228 CALM2P3-201ENST00000400429 449 ntBASIC0.92□□□□□ -2.26
EIF3EP60228 RN7SKP200-201ENST00000410564 320 ntBASIC0.92□□□□□ -2.26
EIF3EP60228 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.92□□□□□ -2.26
EIF3EP60228 AC092473.1-201ENST00000441098 221 ntBASIC0.92□□□□□ -2.26
EIF3EP60228 NDUFB4P10-201ENST00000452541 359 ntBASIC0.92□□□□□ -2.26
EIF3EP60228 RNU7-187P-201ENST00000458985 68 ntBASIC0.92□□□□□ -2.26
EIF3EP60228 RPL39P28-201ENST00000465655 155 ntBASIC0.92□□□□□ -2.26
EIF3EP60228 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.92□□□□□ -2.26
EIF3EP60228 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.92□□□□□ -2.26
EIF3EP60228 RNA5SP454-201ENST00000517231 127 ntBASIC0.92□□□□□ -2.26
EIF3EP60228 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 136.8 ms