Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
AP3S2P59780 RNU5B-2P-201ENST00000363036 113 ntBASIC0.08□□□□□ -2.4
AP3S2P59780 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.08□□□□□ -2.4
AP3S2P59780 RNU6-1297P-201ENST00000384415 104 ntBASIC0.08□□□□□ -2.4
AP3S2P59780 RNU6-994P-201ENST00000410507 111 ntBASIC0.08□□□□□ -2.4
AP3S2P59780 MTCO2P34-201ENST00000421994 607 ntBASIC0.08□□□□□ -2.4
AP3S2P59780 MTCYBP10-201ENST00000424905 650 ntBASIC0.08□□□□□ -2.4
AP3S2P59780 MTCO1P19-201ENST00000443487 500 ntBASIC0.08□□□□□ -2.4
AP3S2P59780 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.08□□□□□ -2.4
AP3S2P59780 RNU7-94P-201ENST00000459576 63 ntBASIC0.08□□□□□ -2.4
AP3S2P59780 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.08□□□□□ -2.4
AP3S2P59780 FRG2DP-202ENST00000566967 323 ntBASIC0.08□□□□□ -2.4
AP3S2P59780 MIR4775-201ENST00000581168 75 ntBASIC0.08□□□□□ -2.4
AP3S2P59780 AP000811.1-201ENST00000603803 651 ntBASIC0.08□□□□□ -2.4
AP3S2P59780 AC008873.1-201ENST00000625051 138 ntBASIC0.08□□□□□ -2.4
AP3S2P59780 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.08□□□□□ -2.4
AP3S2P59780 AC005592.1-201ENST00000566527 1640 ntBASIC0.07□□□□□ -2.4
AP3S2P59780 Y_RNA.224-201ENST00000364308 111 ntBASIC0.07□□□□□ -2.4
AP3S2P59780 RNU6-1127P-201ENST00000384580 107 ntBASIC0.07□□□□□ -2.4
AP3S2P59780 MIR526A1-201ENST00000384897 85 ntBASIC0.07□□□□□ -2.4
AP3S2P59780 MIR487A-201ENST00000385009 80 ntBASIC0.07□□□□□ -2.4
AP3S2P59780 MIR936-201ENST00000401264 98 ntBASIC0.07□□□□□ -2.4
AP3S2P59780 RNU4-46P-201ENST00000410818 138 ntBASIC0.07□□□□□ -2.4
AP3S2P59780 RPL31P35-201ENST00000431058 377 ntBASIC0.07□□□□□ -2.4
AP3S2P59780 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.07□□□□□ -2.4
AP3S2P59780 AC105313.1-201ENST00000509121 353 ntBASIC0.07□□□□□ -2.4
AP3S2P59780 RNU6-612P-201ENST00000516909 102 ntBASIC0.07□□□□□ -2.4
AP3S2P59780 RNU6-1223P-201ENST00000517124 104 ntBASIC0.07□□□□□ -2.4
AP3S2P59780 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.07□□□□□ -2.4
AP3S2P59780 MIR4711-201ENST00000578274 70 ntBASIC0.07□□□□□ -2.4
AP3S2P59780 AC112191.3-201ENST00000604371 277 ntBASIC0.07□□□□□ -2.4
AP3S2P59780 SNRPGP20-201ENST00000604477 205 ntBASIC0.07□□□□□ -2.4
AP3S2P59780 RMST_3.1-201ENST00000611651 109 ntBASIC0.07□□□□□ -2.4
AP3S2P59780 MIR6734-201ENST00000621166 68 ntBASIC0.07□□□□□ -2.4
AP3S2P59780 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.07□□□□□ -2.4
AP3S2P59780 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
AP3S2P59780 RNU1-133P-201ENST00000364867 167 ntBASIC0.06□□□□□ -2.4
AP3S2P59780 SNORD73A-201ENST00000386062 65 ntBASIC0.06□□□□□ -2.4
AP3S2P59780 SNORD105-201ENST00000386910 85 ntBASIC0.06□□□□□ -2.4
AP3S2P59780 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.06□□□□□ -2.4
AP3S2P59780 MIR1185-1-201ENST00000408598 86 ntBASIC0.06□□□□□ -2.4
AP3S2P59780 RPS26P42-201ENST00000413485 326 ntBASIC0.06□□□□□ -2.4
AP3S2P59780 MTND3P9-201ENST00000429526 346 ntBASIC0.06□□□□□ -2.4
AP3S2P59780 AC004854.1-201ENST00000440356 349 ntBASIC0.06□□□□□ -2.4
AP3S2P59780 USP9YP12-201ENST00000450481 570 ntBASIC0.06□□□□□ -2.4
AP3S2P59780 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.06□□□□□ -2.4
AP3S2P59780 MTCO2P18-201ENST00000457151 658 ntBASIC0.06□□□□□ -2.4
AP3S2P59780 RNU6-410P-201ENST00000517006 107 ntBASIC0.06□□□□□ -2.4
AP3S2P59780 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.06□□□□□ -2.4
AP3S2P59780 AC068790.2-201ENST00000602601 557 ntBASIC0.06□□□□□ -2.4
AP3S2P59780 AC091304.9-201ENST00000612091 226 ntBASIC0.06□□□□□ -2.4
AP3S2P59780 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
AP3S2P59780 AL138726.1-201ENST00000614873 333 ntBASIC0.06□□□□□ -2.4
AP3S2P59780 AC139792.3-201ENST00000623525 224 ntBASIC0.06□□□□□ -2.4
AP3S2P59780 SCARNA4-201ENST00000629045 128 ntBASIC0.06□□□□□ -2.4
AP3S2P59780 RNU5F-7P-201ENST00000363696 115 ntBASIC0.05□□□□□ -2.4
AP3S2P59780 RNU5E-5P-201ENST00000365379 116 ntBASIC0.05□□□□□ -2.4
AP3S2P59780 RNU6-906P-201ENST00000384700 70 ntBASIC0.05□□□□□ -2.4
AP3S2P59780 MIR454-201ENST00000390180 115 ntBASIC0.05□□□□□ -2.4
AP3S2P59780 AL355143.1-201ENST00000407101 841 ntBASIC0.05□□□□□ -2.4
AP3S2P59780 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.05□□□□□ -2.4
AP3S2P59780 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.05□□□□□ -2.4
AP3S2P59780 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.05□□□□□ -2.4
AP3S2P59780 AC093019.1-201ENST00000443135 252 ntBASIC0.05□□□□□ -2.4
AP3S2P59780 RNU7-182P-201ENST00000459009 62 ntBASIC0.05□□□□□ -2.4
AP3S2P59780 AP000870.1-201ENST00000472927 406 ntBASIC0.05□□□□□ -2.4
AP3S2P59780 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.05□□□□□ -2.4
AP3S2P59780 RNU6-405P-201ENST00000516637 110 ntBASIC0.05□□□□□ -2.4
AP3S2P59780 RNU6-467P-201ENST00000517027 110 ntBASIC0.05□□□□□ -2.4
AP3S2P59780 RNU2-46P-201ENST00000517038 113 ntBASIC0.05□□□□□ -2.4
AP3S2P59780 RNU6-58P-201ENST00000517143 103 ntBASIC0.05□□□□□ -2.4
AP3S2P59780 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.05□□□□□ -2.4
AP3S2P59780 MRPS36P4-201ENST00000534436 298 ntBASIC0.05□□□□□ -2.4
AP3S2P59780 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.05□□□□□ -2.4
AP3S2P59780 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.05□□□□□ -2.4
AP3S2P59780 AC025449.1-201ENST00000603896 529 ntBASIC0.05□□□□□ -2.4
AP3S2P59780 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.05□□□□□ -2.4
AP3S2P59780 AC008133.2-201ENST00000624540 351 ntBASIC0.05□□□□□ -2.4
AP3S2P59780 SEPT14P19-203ENST00000633205 211 ntBASIC0.05□□□□□ -2.4
AP3S2P59780 ZNF204P-201ENST00000416749 2397 ntBASIC0.05□□□□□ -2.4
AP3S2P59780 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.05□□□□□ -2.4
AP3S2P59780 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.04□□□□□ -2.4
AP3S2P59780 RNU6-1097P-201ENST00000363586 107 ntBASIC0.04□□□□□ -2.4
AP3S2P59780 RNU6-74P-201ENST00000384235 107 ntBASIC0.04□□□□□ -2.4
AP3S2P59780 MIR1-2-201ENST00000384961 85 ntBASIC0.04□□□□□ -2.4
AP3S2P59780 RNU6-177P-201ENST00000411257 104 ntBASIC0.04□□□□□ -2.4
AP3S2P59780 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.04□□□□□ -2.4
AP3S2P59780 SCARNA18-201ENST00000459004 134 ntBASIC0.04□□□□□ -2.4
AP3S2P59780 RPS29P27-201ENST00000463711 170 ntBASIC0.04□□□□□ -2.4
AP3S2P59780 RNA5SP220-201ENST00000516298 104 ntBASIC0.04□□□□□ -2.4
AP3S2P59780 Vault.3-201ENST00000516676 95 ntBASIC0.04□□□□□ -2.4
AP3S2P59780 AC069113.1-201ENST00000517763 267 ntBASIC0.04□□□□□ -2.4
AP3S2P59780 AC022878.1-201ENST00000530684 149 ntBASIC0.04□□□□□ -2.4
AP3S2P59780 MIR4431-201ENST00000579990 94 ntBASIC0.04□□□□□ -2.4
AP3S2P59780 MIR4300-201ENST00000581016 96 ntBASIC0.04□□□□□ -2.4
AP3S2P59780 MIR4999-201ENST00000585029 91 ntBASIC0.04□□□□□ -2.4
AP3S2P59780 7SK.7-201ENST00000603504 247 ntBASIC0.04□□□□□ -2.4
AP3S2P59780 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC0.04□□□□□ -2.4
AP3S2P59780 AL390237.1-201ENST00000404226 1415 ntBASIC0.04□□□□□ -2.4
AP3S2P59780 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.03□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms