Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 AC016717.1-201ENST00000448918 286 ntBASIC2.18□□□□□ -2.06
CDH15P55291 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.18□□□□□ -2.06
CDH15P55291 NDUFB4P10-201ENST00000452541 359 ntBASIC2.18□□□□□ -2.06
CDH15P55291 RNU7-57P-201ENST00000459540 60 ntBASIC2.18□□□□□ -2.06
CDH15P55291 UBL5P3-201ENST00000475112 231 ntBASIC2.18□□□□□ -2.06
CDH15P55291 Y_RNA.661-201ENST00000516003 99 ntBASIC2.18□□□□□ -2.06
CDH15P55291 RN7SKP49-201ENST00000516675 260 ntBASIC2.18□□□□□ -2.06
CDH15P55291 U4.3-201ENST00000621047 82 ntBASIC2.18□□□□□ -2.06
CDH15P55291 AC090971.5-201ENST00000621102 293 ntBASIC2.18□□□□□ -2.06
CDH15P55291 ZNF658B-202ENST00000615961 3375 ntBASIC2.18□□□□□ -2.06
CDH15P55291 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.18□□□□□ -2.06
CDH15P55291 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
CDH15P55291 MIR369-201ENST00000362155 70 ntBASIC2.17□□□□□ -2.06
CDH15P55291 RNU6-23P-201ENST00000363283 107 ntBASIC2.17□□□□□ -2.06
CDH15P55291 U3.8-201ENST00000363675 217 ntBASIC2.17□□□□□ -2.06
CDH15P55291 RNU6-1235P-201ENST00000384559 107 ntBASIC2.17□□□□□ -2.06
CDH15P55291 SNORA67.4-201ENST00000384688 142 ntBASIC2.17□□□□□ -2.06
CDH15P55291 MIR548B-201ENST00000385247 97 ntBASIC2.17□□□□□ -2.06
CDH15P55291 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CDH15P55291 RNA5SP338-201ENST00000410495 85 ntBASIC2.17□□□□□ -2.06
CDH15P55291 RNA5SP450-201ENST00000411206 102 ntBASIC2.17□□□□□ -2.06
CDH15P55291 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.17□□□□□ -2.06
CDH15P55291 Y_RNA.639-201ENST00000458981 102 ntBASIC2.17□□□□□ -2.06
CDH15P55291 RNU6-498P-201ENST00000459468 107 ntBASIC2.17□□□□□ -2.06
CDH15P55291 AC079804.2-201ENST00000490376 200 ntBASIC2.17□□□□□ -2.06
CDH15P55291 RNU6-911P-201ENST00000516523 104 ntBASIC2.17□□□□□ -2.06
CDH15P55291 AP005660.1-201ENST00000522972 293 ntBASIC2.17□□□□□ -2.06
CDH15P55291 AK6P2-201ENST00000549020 471 ntBASIC2.17□□□□□ -2.06
CDH15P55291 AC078899.2-201ENST00000595282 212 ntBASIC2.17□□□□□ -2.06
CDH15P55291 AC067747.1-201ENST00000608026 250 ntBASIC2.17□□□□□ -2.06
CDH15P55291 U2.1-201ENST00000618978 145 ntBASIC2.17□□□□□ -2.06
CDH15P55291 uc_338.22-201ENST00000622722 187 ntBASIC2.17□□□□□ -2.06
CDH15P55291 CTSLP2-204ENST00000629029 392 ntBASIC2.17□□□□□ -2.06
CDH15P55291 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.16□□□□□ -2.06
CDH15P55291 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.16□□□□□ -2.06
CDH15P55291 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
CDH15P55291 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CDH15P55291 Y_RNA.112-201ENST00000363250 102 ntBASIC2.16□□□□□ -2.06
CDH15P55291 AC096644.2-201ENST00000429278 159 ntBASIC2.16□□□□□ -2.06
CDH15P55291 CHEK2P4-201ENST00000450340 246 ntBASIC2.16□□□□□ -2.06
CDH15P55291 PCNPP5-201ENST00000452246 481 ntBASIC2.16□□□□□ -2.06
CDH15P55291 RNU6-856P-201ENST00000516959 98 ntBASIC2.16□□□□□ -2.06
CDH15P55291 AC007229.1-201ENST00000590455 412 ntBASIC2.16□□□□□ -2.06
CDH15P55291 AC092447.9-201ENST00000603395 144 ntBASIC2.16□□□□□ -2.06
CDH15P55291 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.16□□□□□ -2.06
CDH15P55291 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.16□□□□□ -2.06
CDH15P55291 AL159152.1-201ENST00000635019 2587 ntBASIC2.16□□□□□ -2.06
CDH15P55291 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.16□□□□□ -2.06
CDH15P55291 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
CDH15P55291 AC009487.4-201ENST00000624969 3585 ntBASIC2.15□□□□□ -2.06
CDH15P55291 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
CDH15P55291 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.15□□□□□ -2.07
CDH15P55291 SNORA16B-201ENST00000364674 135 ntBASIC2.15□□□□□ -2.07
CDH15P55291 RNU1-115P-201ENST00000365329 160 ntBASIC2.15□□□□□ -2.07
CDH15P55291 SNORA70B-201ENST00000384210 135 ntBASIC2.15□□□□□ -2.07
CDH15P55291 MIR597-201ENST00000384968 97 ntBASIC2.15□□□□□ -2.07
CDH15P55291 MIR27B-201ENST00000385129 97 ntBASIC2.15□□□□□ -2.07
CDH15P55291 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
CDH15P55291 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.15□□□□□ -2.07
CDH15P55291 AL137792.2-201ENST00000443484 235 ntBASIC2.15□□□□□ -2.07
CDH15P55291 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.15□□□□□ -2.07
CDH15P55291 Y_RNA.638-201ENST00000459374 113 ntBASIC2.15□□□□□ -2.07
CDH15P55291 RNU6-237P-201ENST00000515985 71 ntBASIC2.15□□□□□ -2.07
CDH15P55291 RNA5SP24-201ENST00000516478 95 ntBASIC2.15□□□□□ -2.07
CDH15P55291 SNRPGP18-201ENST00000553000 214 ntBASIC2.15□□□□□ -2.07
CDH15P55291 AL442163.3-201ENST00000554110 156 ntBASIC2.15□□□□□ -2.07
CDH15P55291 VN1R91P-201ENST00000594377 169 ntBASIC2.15□□□□□ -2.07
CDH15P55291 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.15□□□□□ -2.07
CDH15P55291 AC064859.1-201ENST00000624741 174 ntBASIC2.15□□□□□ -2.07
CDH15P55291 snoZ196.1-201ENST00000625269 89 ntBASIC2.15□□□□□ -2.07
CDH15P55291 MIR203B-201ENST00000636080 86 ntBASIC2.15□□□□□ -2.07
CDH15P55291 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.15□□□□□ -2.07
CDH15P55291 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.15□□□□□ -2.07
CDH15P55291 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.15□□□□□ -2.07
CDH15P55291 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
CDH15P55291 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.15□□□□□ -2.07
CDH15P55291 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
CDH15P55291 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CDH15P55291 AL596028.1-201ENST00000326971 197 ntBASIC2.14□□□□□ -2.07
CDH15P55291 SNORD114-30-201ENST00000364448 72 ntBASIC2.14□□□□□ -2.07
CDH15P55291 Y_RNA.813-201ENST00000364639 102 ntBASIC2.14□□□□□ -2.07
CDH15P55291 RNU6-57P-201ENST00000411348 103 ntBASIC2.14□□□□□ -2.07
CDH15P55291 AC007677.1-201ENST00000445757 515 ntBASIC2.14□□□□□ -2.07
CDH15P55291 UQCRBP2-201ENST00000447827 297 ntBASIC2.14□□□□□ -2.07
CDH15P55291 AC090255.1-201ENST00000495779 349 ntBASIC2.14□□□□□ -2.07
CDH15P55291 AC074133.1-201ENST00000515696 183 ntBASIC2.14□□□□□ -2.07
CDH15P55291 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.14□□□□□ -2.07
CDH15P55291 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.14□□□□□ -2.07
CDH15P55291 SNORD53-201ENST00000579969 78 ntBASIC2.14□□□□□ -2.07
CDH15P55291 MIR4524B-201ENST00000581569 115 ntBASIC2.14□□□□□ -2.07
CDH15P55291 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.14□□□□□ -2.07
CDH15P55291 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.14□□□□□ -2.07
CDH15P55291 AL357075.2-201ENST00000614906 189 ntBASIC2.14□□□□□ -2.07
CDH15P55291 MIR4272-201ENST00000635924 64 ntBASIC2.14□□□□□ -2.07
CDH15P55291 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CDH15P55291 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.13□□□□□ -2.07
CDH15P55291 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.13□□□□□ -2.07
CDH15P55291 AC245060.5-201ENST00000610778 3293 ntBASIC2.13□□□□□ -2.07
CDH15P55291 Y_RNA.394-201ENST00000383942 103 ntBASIC2.13□□□□□ -2.07
CDH15P55291 RNY1P14-201ENST00000384426 108 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 170.6 ms