Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 SNORA3.2-201ENST00000408221 125 ntBASIC1.89□□□□□ -2.11
CDH13P55290 Y_RNA.646-201ENST00000410980 101 ntBASIC1.89□□□□□ -2.11
CDH13P55290 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CDH13P55290 AC093019.1-201ENST00000443135 252 ntBASIC1.89□□□□□ -2.11
CDH13P55290 UBE2V1P7-201ENST00000446395 340 ntBASIC1.89□□□□□ -2.11
CDH13P55290 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.89□□□□□ -2.11
CDH13P55290 ATP5J2P3-201ENST00000451550 258 ntBASIC1.89□□□□□ -2.11
CDH13P55290 RNU7-57P-201ENST00000459540 60 ntBASIC1.89□□□□□ -2.11
CDH13P55290 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.89□□□□□ -2.11
CDH13P55290 Y_RNA.702-201ENST00000516843 96 ntBASIC1.89□□□□□ -2.11
CDH13P55290 RNU6-1213P-201ENST00000517075 94 ntBASIC1.89□□□□□ -2.11
CDH13P55290 CYCSP23-201ENST00000519781 313 ntBASIC1.89□□□□□ -2.11
CDH13P55290 AC091544.4-201ENST00000555268 342 ntBASIC1.89□□□□□ -2.11
CDH13P55290 SUB1P3-201ENST00000564581 315 ntBASIC1.89□□□□□ -2.11
CDH13P55290 AC010999.1-201ENST00000611856 324 ntBASIC1.89□□□□□ -2.11
CDH13P55290 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.89□□□□□ -2.11
CDH13P55290 AC083806.3-201ENST00000614016 455 ntBASIC1.89□□□□□ -2.11
CDH13P55290 AC133104.2-201ENST00000615272 193 ntBASIC1.89□□□□□ -2.11
CDH13P55290 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.89□□□□□ -2.11
CDH13P55290 MTND5P16-201ENST00000460269 1703 ntBASIC1.88□□□□□ -2.11
CDH13P55290 Y_RNA.263-201ENST00000364659 114 ntBASIC1.88□□□□□ -2.11
CDH13P55290 Y_RNA.384-201ENST00000383909 102 ntBASIC1.88□□□□□ -2.11
CDH13P55290 RNU6-310P-201ENST00000384655 107 ntBASIC1.88□□□□□ -2.11
CDH13P55290 RN7SKP192-201ENST00000411291 327 ntBASIC1.88□□□□□ -2.11
CDH13P55290 AC009310.1-201ENST00000414414 451 ntBASIC1.88□□□□□ -2.11
CDH13P55290 EIF1P2-201ENST00000428233 350 ntBASIC1.88□□□□□ -2.11
CDH13P55290 RPL23AP6-201ENST00000446637 472 ntBASIC1.88□□□□□ -2.11
CDH13P55290 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.88□□□□□ -2.11
CDH13P55290 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.88□□□□□ -2.11
CDH13P55290 Y_RNA.653-201ENST00000459091 95 ntBASIC1.88□□□□□ -2.11
CDH13P55290 AC091179.3-201ENST00000474761 144 ntBASIC1.88□□□□□ -2.11
CDH13P55290 YWHAEP4-201ENST00000505390 198 ntBASIC1.88□□□□□ -2.11
CDH13P55290 MRPS17P9-201ENST00000511924 393 ntBASIC1.88□□□□□ -2.11
CDH13P55290 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.88□□□□□ -2.11
CDH13P55290 AC004584.2-201ENST00000570407 410 ntBASIC1.88□□□□□ -2.11
CDH13P55290 MIR4299-201ENST00000577899 72 ntBASIC1.88□□□□□ -2.11
CDH13P55290 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.88□□□□□ -2.11
CDH13P55290 MIR5695-201ENST00000579717 85 ntBASIC1.88□□□□□ -2.11
CDH13P55290 AC005296.1-201ENST00000616145 209 ntBASIC1.88□□□□□ -2.11
CDH13P55290 AC104260.1-201ENST00000616660 539 ntBASIC1.88□□□□□ -2.11
CDH13P55290 snoZ196.1-201ENST00000625269 89 ntBASIC1.88□□□□□ -2.11
CDH13P55290 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.88□□□□□ -2.11
CDH13P55290 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.88□□□□□ -2.11
CDH13P55290 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.87□□□□□ -2.11
CDH13P55290 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CDH13P55290 Y_RNA.577-201ENST00000384794 101 ntBASIC1.87□□□□□ -2.11
CDH13P55290 RN7SKP223-201ENST00000410582 62 ntBASIC1.87□□□□□ -2.11
CDH13P55290 RNA5SP489-201ENST00000410986 109 ntBASIC1.87□□□□□ -2.11
CDH13P55290 AC060773.1-201ENST00000421698 310 ntBASIC1.87□□□□□ -2.11
CDH13P55290 AC016717.1-201ENST00000448918 286 ntBASIC1.87□□□□□ -2.11
CDH13P55290 TRBV12-1-201ENST00000479785 344 ntBASIC1.87□□□□□ -2.11
CDH13P55290 AC011406.1-201ENST00000512440 370 ntBASIC1.87□□□□□ -2.11
CDH13P55290 RNVU1-2-201ENST00000516326 135 ntBASIC1.87□□□□□ -2.11
CDH13P55290 Y_RNA.683-201ENST00000516508 93 ntBASIC1.87□□□□□ -2.11
CDH13P55290 RNU1-117P-201ENST00000517041 158 ntBASIC1.87□□□□□ -2.11
CDH13P55290 RNU6-264P-201ENST00000517134 104 ntBASIC1.87□□□□□ -2.11
CDH13P55290 SUB1P4-201ENST00000566062 339 ntBASIC1.87□□□□□ -2.11
CDH13P55290 AL096840.1-201ENST00000603287 93 ntBASIC1.87□□□□□ -2.11
CDH13P55290 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.87□□□□□ -2.11
CDH13P55290 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CDH13P55290 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
CDH13P55290 RNU6-874P-201ENST00000362390 105 ntBASIC1.86□□□□□ -2.11
CDH13P55290 RNU6-222P-201ENST00000362438 107 ntBASIC1.86□□□□□ -2.11
CDH13P55290 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.86□□□□□ -2.11
CDH13P55290 DPH3P2-201ENST00000422618 250 ntBASIC1.86□□□□□ -2.11
CDH13P55290 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.86□□□□□ -2.11
CDH13P55290 ELOCP24-201ENST00000456370 334 ntBASIC1.86□□□□□ -2.11
CDH13P55290 RNU6-221P-201ENST00000459541 99 ntBASIC1.86□□□□□ -2.11
CDH13P55290 MIR2355-201ENST00000517199 87 ntBASIC1.86□□□□□ -2.11
CDH13P55290 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.86□□□□□ -2.11
CDH13P55290 AC093023.1-201ENST00000547375 507 ntBASIC1.86□□□□□ -2.11
CDH13P55290 FRG2DP-202ENST00000566967 323 ntBASIC1.86□□□□□ -2.11
CDH13P55290 AC022254.1-201ENST00000567857 235 ntBASIC1.86□□□□□ -2.11
CDH13P55290 AC010900.2-201ENST00000604508 210 ntBASIC1.86□□□□□ -2.11
CDH13P55290 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.86□□□□□ -2.11
CDH13P55290 AC013412.1-201ENST00000610687 192 ntBASIC1.86□□□□□ -2.11
CDH13P55290 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.86□□□□□ -2.11
CDH13P55290 MIR1302-1-201ENST00000637932 143 ntBASIC1.86□□□□□ -2.11
CDH13P55290 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.86□□□□□ -2.11
CDH13P55290 Y_RNA.557-201ENST00000384680 107 ntBASIC1.85□□□□□ -2.11
CDH13P55290 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.85□□□□□ -2.11
CDH13P55290 AC008134.1-201ENST00000420943 193 ntBASIC1.85□□□□□ -2.11
CDH13P55290 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.85□□□□□ -2.11
CDH13P55290 AL445305.1-201ENST00000432577 575 ntBASIC1.85□□□□□ -2.11
CDH13P55290 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.85□□□□□ -2.11
CDH13P55290 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.85□□□□□ -2.11
CDH13P55290 RNU6-1146P-201ENST00000516282 102 ntBASIC1.85□□□□□ -2.11
CDH13P55290 MZT1P2-201ENST00000604387 248 ntBASIC1.85□□□□□ -2.11
CDH13P55290 AC080078.3-201ENST00000605407 463 ntBASIC1.85□□□□□ -2.11
CDH13P55290 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.85□□□□□ -2.11
CDH13P55290 MTND5P35-201ENST00000557537 1720 ntBASIC1.85□□□□□ -2.11
CDH13P55290 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
CDH13P55290 U8.2-201ENST00000363156 134 ntBASIC1.84□□□□□ -2.11
CDH13P55290 RNU6-727P-201ENST00000363592 107 ntBASIC1.84□□□□□ -2.11
CDH13P55290 RNU6-99P-201ENST00000364721 107 ntBASIC1.84□□□□□ -2.11
CDH13P55290 Y_RNA.415-201ENST00000384012 112 ntBASIC1.84□□□□□ -2.11
CDH13P55290 RNU6-890P-201ENST00000384121 107 ntBASIC1.84□□□□□ -2.11
CDH13P55290 SNORA70B-201ENST00000384210 135 ntBASIC1.84□□□□□ -2.11
CDH13P55290 MIR329-1-201ENST00000385028 80 ntBASIC1.84□□□□□ -2.11
CDH13P55290 MIR548B-201ENST00000385247 97 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms