Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 SNORA4.4-201ENST00000515921 135 ntBASIC1.99□□□□□ -2.09
CDH11P55287 RNU5F-4P-201ENST00000516581 114 ntBASIC1.99□□□□□ -2.09
CDH11P55287 RN7SKP295-201ENST00000517264 153 ntBASIC1.99□□□□□ -2.09
CDH11P55287 AC087441.2-201ENST00000529141 262 ntBASIC1.99□□□□□ -2.09
CDH11P55287 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CDH11P55287 AK6P2-201ENST00000549020 471 ntBASIC1.99□□□□□ -2.09
CDH11P55287 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.99□□□□□ -2.09
CDH11P55287 MIR5695-201ENST00000579717 85 ntBASIC1.99□□□□□ -2.09
CDH11P55287 MIR3171-201ENST00000584270 74 ntBASIC1.99□□□□□ -2.09
CDH11P55287 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.99□□□□□ -2.09
CDH11P55287 AC022202.1-201ENST00000613515 211 ntBASIC1.99□□□□□ -2.09
CDH11P55287 AC005296.1-201ENST00000616145 209 ntBASIC1.99□□□□□ -2.09
CDH11P55287 AC009831.4-201ENST00000620744 325 ntBASIC1.99□□□□□ -2.09
CDH11P55287 AC012640.5-201ENST00000623897 319 ntBASIC1.99□□□□□ -2.09
CDH11P55287 AL606534.2-204ENST00000635008 178 ntBASIC1.99□□□□□ -2.09
CDH11P55287 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
CDH11P55287 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.99□□□□□ -2.09
CDH11P55287 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CDH11P55287 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CDH11P55287 Y_RNA.28-201ENST00000362554 111 ntBASIC1.98□□□□□ -2.09
CDH11P55287 RNA5SP361-201ENST00000362686 118 ntBASIC1.98□□□□□ -2.09
CDH11P55287 Y_RNA.80-201ENST00000362996 102 ntBASIC1.98□□□□□ -2.09
CDH11P55287 Y_RNA.216-201ENST00000364205 93 ntBASIC1.98□□□□□ -2.09
CDH11P55287 SNORD31B-201ENST00000364977 69 ntBASIC1.98□□□□□ -2.09
CDH11P55287 Y_RNA.485-201ENST00000384395 102 ntBASIC1.98□□□□□ -2.09
CDH11P55287 SRIP3-201ENST00000413200 219 ntBASIC1.98□□□□□ -2.09
CDH11P55287 AC114482.1-201ENST00000418010 247 ntBASIC1.98□□□□□ -2.09
CDH11P55287 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.98□□□□□ -2.09
CDH11P55287 RNU6-717P-201ENST00000459076 104 ntBASIC1.98□□□□□ -2.09
CDH11P55287 RNU7-14P-201ENST00000459331 62 ntBASIC1.98□□□□□ -2.09
CDH11P55287 RNU7-169P-201ENST00000459456 61 ntBASIC1.98□□□□□ -2.09
CDH11P55287 AL163540.1-201ENST00000485382 386 ntBASIC1.98□□□□□ -2.09
CDH11P55287 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.98□□□□□ -2.09
CDH11P55287 Y_RNA.661-201ENST00000516003 99 ntBASIC1.98□□□□□ -2.09
CDH11P55287 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CDH11P55287 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.98□□□□□ -2.09
CDH11P55287 MIR4648-201ENST00000580107 72 ntBASIC1.98□□□□□ -2.09
CDH11P55287 MIR5188-201ENST00000583467 113 ntBASIC1.98□□□□□ -2.09
CDH11P55287 MZT1P2-201ENST00000604387 248 ntBASIC1.98□□□□□ -2.09
CDH11P55287 U2.1-201ENST00000618978 145 ntBASIC1.98□□□□□ -2.09
CDH11P55287 AC008873.1-201ENST00000625051 138 ntBASIC1.98□□□□□ -2.09
CDH11P55287 MTND4P1-201ENST00000457501 1466 ntBASIC1.98□□□□□ -2.09
CDH11P55287 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
CDH11P55287 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CDH11P55287 AL359851.1-201ENST00000569460 4997 ntBASIC1.97□□□□□ -2.09
CDH11P55287 RNU6-743P-201ENST00000364151 106 ntBASIC1.97□□□□□ -2.09
CDH11P55287 SNORA22B-201ENST00000383876 138 ntBASIC1.97□□□□□ -2.09
CDH11P55287 AL357139.1-201ENST00000407792 426 ntBASIC1.97□□□□□ -2.09
CDH11P55287 MIR320B2-201ENST00000408479 138 ntBASIC1.97□□□□□ -2.09
CDH11P55287 EDDM3CP-201ENST00000415977 425 ntBASIC1.97□□□□□ -2.09
CDH11P55287 AC005534.2-201ENST00000431047 433 ntBASIC1.97□□□□□ -2.09
CDH11P55287 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.97□□□□□ -2.09
CDH11P55287 AC010095.1-201ENST00000443543 144 ntBASIC1.97□□□□□ -2.09
CDH11P55287 AC007395.1-201ENST00000451333 677 ntBASIC1.97□□□□□ -2.09
CDH11P55287 RNU6-991P-201ENST00000516168 107 ntBASIC1.97□□□□□ -2.09
CDH11P55287 RN7SKP49-201ENST00000516675 260 ntBASIC1.97□□□□□ -2.09
CDH11P55287 RNA5SP490-201ENST00000517141 136 ntBASIC1.97□□□□□ -2.09
CDH11P55287 IGKV3-31-201ENST00000523109 329 ntBASIC1.97□□□□□ -2.09
CDH11P55287 AC093023.1-201ENST00000547375 507 ntBASIC1.97□□□□□ -2.09
CDH11P55287 RRN3P3-201ENST00000549207 578 ntBASIC1.97□□□□□ -2.09
CDH11P55287 AL442163.3-201ENST00000554110 156 ntBASIC1.97□□□□□ -2.09
CDH11P55287 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.97□□□□□ -2.09
CDH11P55287 VN1R91P-201ENST00000594377 169 ntBASIC1.97□□□□□ -2.09
CDH11P55287 SNORD14A-201ENST00000606526 91 ntBASIC1.97□□□□□ -2.09
CDH11P55287 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.97□□□□□ -2.09
CDH11P55287 AC006157.1-201ENST00000611750 366 ntBASIC1.97□□□□□ -2.09
CDH11P55287 AC010999.1-201ENST00000611856 324 ntBASIC1.97□□□□□ -2.09
CDH11P55287 AL357075.2-201ENST00000614906 189 ntBASIC1.97□□□□□ -2.09
CDH11P55287 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.97□□□□□ -2.09
CDH11P55287 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
CDH11P55287 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.96□□□□□ -2.09
CDH11P55287 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.96□□□□□ -2.1
CDH11P55287 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CDH11P55287 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.96□□□□□ -2.1
CDH11P55287 RNU6-545P-201ENST00000362681 104 ntBASIC1.96□□□□□ -2.1
CDH11P55287 RNU5F-3P-201ENST00000363767 117 ntBASIC1.96□□□□□ -2.1
CDH11P55287 RNU6-793P-201ENST00000384233 104 ntBASIC1.96□□□□□ -2.1
CDH11P55287 RNY3P4-201ENST00000384428 101 ntBASIC1.96□□□□□ -2.1
CDH11P55287 MIR586-201ENST00000385035 97 ntBASIC1.96□□□□□ -2.1
CDH11P55287 Y_RNA.645-201ENST00000391229 102 ntBASIC1.96□□□□□ -2.1
CDH11P55287 MIR1302-11-201ENST00000408051 138 ntBASIC1.96□□□□□ -2.1
CDH11P55287 MIR1302-9-201ENST00000408365 138 ntBASIC1.96□□□□□ -2.1
CDH11P55287 MIR1283-1-201ENST00000408494 87 ntBASIC1.96□□□□□ -2.1
CDH11P55287 MIR1302-10-201ENST00000408734 138 ntBASIC1.96□□□□□ -2.1
CDH11P55287 RNU2-40P-201ENST00000410833 196 ntBASIC1.96□□□□□ -2.1
CDH11P55287 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.96□□□□□ -2.1
CDH11P55287 MTCO1P44-201ENST00000441935 243 ntBASIC1.96□□□□□ -2.1
CDH11P55287 AC112492.4-201ENST00000456549 352 ntBASIC1.96□□□□□ -2.1
CDH11P55287 snoU13.26-201ENST00000459452 105 ntBASIC1.96□□□□□ -2.1
CDH11P55287 AC025033.1-201ENST00000463883 194 ntBASIC1.96□□□□□ -2.1
CDH11P55287 HMGN2P9-201ENST00000476875 229 ntBASIC1.96□□□□□ -2.1
CDH11P55287 AC079804.2-201ENST00000490376 200 ntBASIC1.96□□□□□ -2.1
CDH11P55287 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.96□□□□□ -2.1
CDH11P55287 RNU6-475P-201ENST00000516073 104 ntBASIC1.96□□□□□ -2.1
CDH11P55287 SNORA40.14-201ENST00000516543 86 ntBASIC1.96□□□□□ -2.1
CDH11P55287 RNA5SP137-201ENST00000516833 135 ntBASIC1.96□□□□□ -2.1
CDH11P55287 AC022868.1-201ENST00000517767 391 ntBASIC1.96□□□□□ -2.1
CDH11P55287 ANP32BP3-201ENST00000559213 706 ntBASIC1.96□□□□□ -2.1
CDH11P55287 AL356055.1-201ENST00000602528 446 ntBASIC1.96□□□□□ -2.1
CDH11P55287 MIR1302-2-201ENST00000607096 138 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 177.6 ms