Protein–RNA interactions for Protein: P53804

TTC3, E3 ubiquitin-protein ligase TTC3, humanhuman

Predictions only

Length 2,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3P53804 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.52□□□□□ -2.01
TTC3P53804 AL109809.4-201ENST00000603520 2185 ntBASIC2.51□□□□□ -2.01
TTC3P53804 MIR411-201ENST00000362239 96 ntBASIC2.51□□□□□ -2.01
TTC3P53804 Y_RNA.82-201ENST00000363000 102 ntBASIC2.51□□□□□ -2.01
TTC3P53804 Y_RNA.83-201ENST00000363005 113 ntBASIC2.51□□□□□ -2.01
TTC3P53804 Y_RNA.92-201ENST00000363043 102 ntBASIC2.51□□□□□ -2.01
TTC3P53804 Y_RNA.235-201ENST00000364412 102 ntBASIC2.51□□□□□ -2.01
TTC3P53804 Y_RNA.306-201ENST00000365015 102 ntBASIC2.51□□□□□ -2.01
TTC3P53804 Y_RNA.308-201ENST00000365043 101 ntBASIC2.51□□□□□ -2.01
TTC3P53804 Y_RNA.312-201ENST00000365089 102 ntBASIC2.51□□□□□ -2.01
TTC3P53804 Y_RNA.322-201ENST00000365151 102 ntBASIC2.51□□□□□ -2.01
TTC3P53804 RNU6-487P-201ENST00000365430 104 ntBASIC2.51□□□□□ -2.01
TTC3P53804 RPS26P42-201ENST00000413485 326 ntBASIC2.51□□□□□ -2.01
TTC3P53804 AC138623.1-201ENST00000418060 216 ntBASIC2.51□□□□□ -2.01
TTC3P53804 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.51□□□□□ -2.01
TTC3P53804 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.51□□□□□ -2.01
TTC3P53804 HMGN2P10-201ENST00000448085 265 ntBASIC2.51□□□□□ -2.01
TTC3P53804 AC010099.1-201ENST00000455434 375 ntBASIC2.51□□□□□ -2.01
TTC3P53804 Y_RNA.650-201ENST00000459002 102 ntBASIC2.51□□□□□ -2.01
TTC3P53804 RNA5SP310-201ENST00000459084 116 ntBASIC2.51□□□□□ -2.01
TTC3P53804 MED28P2-201ENST00000475771 317 ntBASIC2.51□□□□□ -2.01
TTC3P53804 SNORA25.14-201ENST00000516481 132 ntBASIC2.51□□□□□ -2.01
TTC3P53804 Y_RNA.777-201ENST00000516982 102 ntBASIC2.51□□□□□ -2.01
TTC3P53804 AP002392.1-201ENST00000537692 208 ntBASIC2.51□□□□□ -2.01
TTC3P53804 Y_RNA.771-201ENST00000598668 102 ntBASIC2.51□□□□□ -2.01
TTC3P53804 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.51□□□□□ -2.01
TTC3P53804 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.51□□□□□ -2.01
TTC3P53804 Y_RNA.789-201ENST00000622480 102 ntBASIC2.51□□□□□ -2.01
TTC3P53804 MIR3529-201ENST00000637713 78 ntBASIC2.51□□□□□ -2.01
TTC3P53804 AC010889.1-201ENST00000566193 2666 ntBASIC2.51□□□□□ -2.01
TTC3P53804 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
TTC3P53804 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
TTC3P53804 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.51□□□□□ -2.01
TTC3P53804 RNU6-626P-201ENST00000363354 107 ntBASIC2.51□□□□□ -2.01
TTC3P53804 RNU6-1210P-201ENST00000363775 107 ntBASIC2.51□□□□□ -2.01
TTC3P53804 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.51□□□□□ -2.01
TTC3P53804 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.51□□□□□ -2.01
TTC3P53804 AL445305.1-201ENST00000432577 575 ntBASIC2.51□□□□□ -2.01
TTC3P53804 PRELID3BP1-201ENST00000457142 540 ntBASIC2.51□□□□□ -2.01
TTC3P53804 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.51□□□□□ -2.01
TTC3P53804 AC023824.2-201ENST00000566185 400 ntBASIC2.51□□□□□ -2.01
TTC3P53804 AC025281.1-201ENST00000567026 265 ntBASIC2.51□□□□□ -2.01
TTC3P53804 SNORD98-201ENST00000636377 67 ntBASIC2.51□□□□□ -2.01
TTC3P53804 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
TTC3P53804 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
TTC3P53804 RNA5SP361-201ENST00000362686 118 ntBASIC2.5□□□□□ -2.01
TTC3P53804 RNA5SP201-201ENST00000410316 124 ntBASIC2.5□□□□□ -2.01
TTC3P53804 CYCSP48-201ENST00000417124 323 ntBASIC2.5□□□□□ -2.01
TTC3P53804 RPS15AP5-201ENST00000436276 388 ntBASIC2.5□□□□□ -2.01
TTC3P53804 SUMO1P3-201ENST00000439961 304 ntBASIC2.5□□□□□ -2.01
TTC3P53804 AC112771.1-201ENST00000463581 102 ntBASIC2.5□□□□□ -2.01
TTC3P53804 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.5□□□□□ -2.01
TTC3P53804 MIR5695-201ENST00000579717 85 ntBASIC2.5□□□□□ -2.01
TTC3P53804 RPS15AP11-201ENST00000594193 385 ntBASIC2.5□□□□□ -2.01
TTC3P53804 uc_338.14-201ENST00000613162 166 ntBASIC2.5□□□□□ -2.01
TTC3P53804 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.5□□□□□ -2.01
TTC3P53804 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
TTC3P53804 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
TTC3P53804 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.5□□□□□ -2.01
TTC3P53804 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
TTC3P53804 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.5□□□□□ -2.01
TTC3P53804 RBBP8P1-201ENST00000449447 1844 ntBASIC2.49□□□□□ -2.01
TTC3P53804 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
TTC3P53804 Y_RNA.76-201ENST00000362931 109 ntBASIC2.49□□□□□ -2.01
TTC3P53804 RNU6-1175P-201ENST00000365200 107 ntBASIC2.49□□□□□ -2.01
TTC3P53804 RNU6-378P-201ENST00000384324 107 ntBASIC2.49□□□□□ -2.01
TTC3P53804 Y_RNA.595-201ENST00000410403 105 ntBASIC2.49□□□□□ -2.01
TTC3P53804 AL390729.2-201ENST00000416137 156 ntBASIC2.49□□□□□ -2.01
TTC3P53804 Z98742.2-201ENST00000431564 187 ntBASIC2.49□□□□□ -2.01
TTC3P53804 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
TTC3P53804 AC005042.3-201ENST00000453230 174 ntBASIC2.49□□□□□ -2.01
TTC3P53804 Y_RNA.644-201ENST00000459006 113 ntBASIC2.49□□□□□ -2.01
TTC3P53804 Y_RNA.674-201ENST00000516362 113 ntBASIC2.49□□□□□ -2.01
TTC3P53804 RNU6-58P-201ENST00000517143 103 ntBASIC2.49□□□□□ -2.01
TTC3P53804 AC233702.2-202ENST00000562547 291 ntBASIC2.49□□□□□ -2.01
TTC3P53804 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.49□□□□□ -2.01
TTC3P53804 AC006380.1-201ENST00000603598 186 ntBASIC2.49□□□□□ -2.01
TTC3P53804 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.49□□□□□ -2.01
TTC3P53804 AC092881.1-201ENST00000638218 2733 ntBASIC2.49□□□□□ -2.01
TTC3P53804 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
TTC3P53804 Y_RNA.297-201ENST00000364950 91 ntBASIC2.49□□□□□ -2.01
TTC3P53804 RNU6-198P-201ENST00000384258 104 ntBASIC2.49□□□□□ -2.01
TTC3P53804 Y_RNA.515-201ENST00000384535 112 ntBASIC2.49□□□□□ -2.01
TTC3P53804 Y_RNA.518-201ENST00000384552 113 ntBASIC2.49□□□□□ -2.01
TTC3P53804 MIR487A-201ENST00000385009 80 ntBASIC2.49□□□□□ -2.01
TTC3P53804 AL023284.1-201ENST00000403956 276 ntBASIC2.49□□□□□ -2.01
TTC3P53804 RNU6-651P-201ENST00000411040 105 ntBASIC2.49□□□□□ -2.01
TTC3P53804 ELOCP21-201ENST00000412558 336 ntBASIC2.49□□□□□ -2.01
TTC3P53804 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.49□□□□□ -2.01
TTC3P53804 AL591806.2-201ENST00000433122 173 ntBASIC2.49□□□□□ -2.01
TTC3P53804 POLR2KP2-201ENST00000438155 177 ntBASIC2.49□□□□□ -2.01
TTC3P53804 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.49□□□□□ -2.01
TTC3P53804 AL162424.1-201ENST00000602325 221 ntBASIC2.49□□□□□ -2.01
TTC3P53804 AC067747.1-201ENST00000608026 250 ntBASIC2.49□□□□□ -2.01
TTC3P53804 AL359198.2-201ENST00000611836 194 ntBASIC2.49□□□□□ -2.01
TTC3P53804 BX322639.1-202ENST00000423987 2213 ntBASIC2.49□□□□□ -2.01
TTC3P53804 AP006437.1-201ENST00000641440 3685 ntBASIC2.49□□□□□ -2.01
TTC3P53804 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
TTC3P53804 RNU2-54P-201ENST00000410299 190 ntBASIC2.48□□□□□ -2.01
TTC3P53804 RNU6-1001P-201ENST00000411265 100 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms