Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.07□□□□□ -2.24
ACLYP53396 RNU6-1132P-201ENST00000459214 107 ntBASIC1.07□□□□□ -2.24
ACLYP53396 RPS3AP17-201ENST00000472594 777 ntBASIC1.07□□□□□ -2.24
ACLYP53396 SNORA19.2-201ENST00000516013 114 ntBASIC1.07□□□□□ -2.24
ACLYP53396 RNU6-1038P-201ENST00000516516 104 ntBASIC1.07□□□□□ -2.24
ACLYP53396 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.07□□□□□ -2.24
ACLYP53396 AL118558.2-201ENST00000556294 238 ntBASIC1.07□□□□□ -2.24
ACLYP53396 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.07□□□□□ -2.24
ACLYP53396 Y_RNA.287-201ENST00000364853 94 ntBASIC1.06□□□□□ -2.24
ACLYP53396 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
ACLYP53396 RNA5SP323-201ENST00000391094 133 ntBASIC1.06□□□□□ -2.24
ACLYP53396 MIR1253-201ENST00000408273 105 ntBASIC1.06□□□□□ -2.24
ACLYP53396 RNU6-57P-201ENST00000411348 103 ntBASIC1.06□□□□□ -2.24
ACLYP53396 AL663109.1-201ENST00000411498 844 ntBASIC1.06□□□□□ -2.24
ACLYP53396 CDK8P2-201ENST00000415020 547 ntBASIC1.06□□□□□ -2.24
ACLYP53396 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.06□□□□□ -2.24
ACLYP53396 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.06□□□□□ -2.24
ACLYP53396 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.06□□□□□ -2.24
ACLYP53396 AL359672.1-201ENST00000442302 409 ntBASIC1.06□□□□□ -2.24
ACLYP53396 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.06□□□□□ -2.24
ACLYP53396 RNU6-956P-201ENST00000458868 103 ntBASIC1.06□□□□□ -2.24
ACLYP53396 RNU7-57P-201ENST00000459540 60 ntBASIC1.06□□□□□ -2.24
ACLYP53396 RNU7-40P-201ENST00000516397 64 ntBASIC1.06□□□□□ -2.24
ACLYP53396 RN7SKP88-201ENST00000516847 250 ntBASIC1.06□□□□□ -2.24
ACLYP53396 CBX3P8-201ENST00000532412 525 ntBASIC1.06□□□□□ -2.24
ACLYP53396 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.06□□□□□ -2.24
ACLYP53396 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.06□□□□□ -2.24
ACLYP53396 AL157687.1-201ENST00000554853 619 ntBASIC1.06□□□□□ -2.24
ACLYP53396 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.06□□□□□ -2.24
ACLYP53396 AC005730.3-201ENST00000583067 366 ntBASIC1.06□□□□□ -2.24
ACLYP53396 MIR5692C1-201ENST00000585309 91 ntBASIC1.06□□□□□ -2.24
ACLYP53396 AL121757.2-201ENST00000611223 313 ntBASIC1.06□□□□□ -2.24
ACLYP53396 7SK.8-201ENST00000612110 250 ntBASIC1.06□□□□□ -2.24
ACLYP53396 7SK.11-201ENST00000615477 250 ntBASIC1.06□□□□□ -2.24
ACLYP53396 7SK.13-201ENST00000622040 250 ntBASIC1.06□□□□□ -2.24
ACLYP53396 AC008873.1-201ENST00000625051 138 ntBASIC1.06□□□□□ -2.24
ACLYP53396 AC099654.5-201ENST00000636479 350 ntBASIC1.06□□□□□ -2.24
ACLYP53396 Y_RNA.296-201ENST00000364930 108 ntBASIC1.05□□□□□ -2.24
ACLYP53396 Y_RNA.378-201ENST00000365652 113 ntBASIC1.05□□□□□ -2.24
ACLYP53396 RNU6-950P-201ENST00000384651 107 ntBASIC1.05□□□□□ -2.24
ACLYP53396 RNA5SP109-201ENST00000391010 116 ntBASIC1.05□□□□□ -2.24
ACLYP53396 MIR320B2-201ENST00000408479 138 ntBASIC1.05□□□□□ -2.24
ACLYP53396 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.05□□□□□ -2.24
ACLYP53396 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.05□□□□□ -2.24
ACLYP53396 TIMM9P3-201ENST00000428659 274 ntBASIC1.05□□□□□ -2.24
ACLYP53396 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.05□□□□□ -2.24
ACLYP53396 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.05□□□□□ -2.24
ACLYP53396 Y_RNA.654-201ENST00000497848 106 ntBASIC1.05□□□□□ -2.24
ACLYP53396 RNA5SP401-201ENST00000515920 127 ntBASIC1.05□□□□□ -2.24
ACLYP53396 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
ACLYP53396 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.05□□□□□ -2.24
ACLYP53396 MIR3664-201ENST00000579074 99 ntBASIC1.05□□□□□ -2.24
ACLYP53396 RN7SL793P-201ENST00000583259 296 ntBASIC1.05□□□□□ -2.24
ACLYP53396 AC121247.2-201ENST00000604776 136 ntBASIC1.05□□□□□ -2.24
ACLYP53396 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.05□□□□□ -2.24
ACLYP53396 AC068792.1-201ENST00000621354 417 ntBASIC1.05□□□□□ -2.24
ACLYP53396 AL078596.1-201ENST00000624856 447 ntBASIC1.05□□□□□ -2.24
ACLYP53396 SCARNA4-201ENST00000629045 128 ntBASIC1.05□□□□□ -2.24
ACLYP53396 OR5AK4P-201ENST00000635912 903 ntBASIC1.05□□□□□ -2.24
ACLYP53396 RNU4-66P-201ENST00000365199 138 ntBASIC1.04□□□□□ -2.24
ACLYP53396 RNU6-38P-201ENST00000384085 107 ntBASIC1.04□□□□□ -2.24
ACLYP53396 RNA5SP467-201ENST00000391274 118 ntBASIC1.04□□□□□ -2.24
ACLYP53396 RNU6-325P-201ENST00000411132 105 ntBASIC1.04□□□□□ -2.24
ACLYP53396 MRPS10P2-201ENST00000431226 381 ntBASIC1.04□□□□□ -2.24
ACLYP53396 RPS29P28-201ENST00000446439 141 ntBASIC1.04□□□□□ -2.24
ACLYP53396 RN7SKP298-201ENST00000515950 94 ntBASIC1.04□□□□□ -2.24
ACLYP53396 AL929325.1-201ENST00000603096 117 ntBASIC1.04□□□□□ -2.24
ACLYP53396 AL020996.3-201ENST00000606617 222 ntBASIC1.04□□□□□ -2.24
ACLYP53396 AC097065.2-201ENST00000608159 533 ntBASIC1.04□□□□□ -2.24
ACLYP53396 AC021506.2-201ENST00000612354 169 ntBASIC1.04□□□□□ -2.24
ACLYP53396 AC137590.2-201ENST00000619709 240 ntBASIC1.04□□□□□ -2.24
ACLYP53396 snoZ196.1-201ENST00000625269 89 ntBASIC1.04□□□□□ -2.24
ACLYP53396 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
ACLYP53396 AC018630.2-201ENST00000534866 2403 ntBASIC1.04□□□□□ -2.24
ACLYP53396 RNU6-214P-201ENST00000384130 107 ntBASIC1.03□□□□□ -2.24
ACLYP53396 SNORA70.7-201ENST00000384159 133 ntBASIC1.03□□□□□ -2.24
ACLYP53396 SNORA67.2-201ENST00000384300 149 ntBASIC1.03□□□□□ -2.24
ACLYP53396 RNY3P9-201ENST00000384727 106 ntBASIC1.03□□□□□ -2.24
ACLYP53396 MIR521-1-201ENST00000384902 87 ntBASIC1.03□□□□□ -2.24
ACLYP53396 AL356776.1-201ENST00000406574 447 ntBASIC1.03□□□□□ -2.24
ACLYP53396 AC016909.1-201ENST00000415916 166 ntBASIC1.03□□□□□ -2.24
ACLYP53396 AC008134.1-201ENST00000420943 193 ntBASIC1.03□□□□□ -2.24
ACLYP53396 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.03□□□□□ -2.24
ACLYP53396 PGBD4P5-201ENST00000445958 426 ntBASIC1.03□□□□□ -2.24
ACLYP53396 OR2A41P-201ENST00000473586 105 ntBASIC1.03□□□□□ -2.24
ACLYP53396 RNU6-405P-201ENST00000516637 110 ntBASIC1.03□□□□□ -2.24
ACLYP53396 MTND1P35-201ENST00000526739 508 ntBASIC1.03□□□□□ -2.24
ACLYP53396 MIR4698-201ENST00000577795 80 ntBASIC1.03□□□□□ -2.24
ACLYP53396 AC146944.4-201ENST00000602697 718 ntBASIC1.03□□□□□ -2.24
ACLYP53396 MIR8076-201ENST00000611401 83 ntBASIC1.03□□□□□ -2.24
ACLYP53396 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.03□□□□□ -2.24
ACLYP53396 Z69908.1-201ENST00000622603 247 ntBASIC1.03□□□□□ -2.24
ACLYP53396 RNU4-20P-201ENST00000365601 151 ntBASIC1.02□□□□□ -2.25
ACLYP53396 RNU6-784P-201ENST00000384330 106 ntBASIC1.02□□□□□ -2.25
ACLYP53396 RNY1P4-201ENST00000384595 115 ntBASIC1.02□□□□□ -2.25
ACLYP53396 MIR216A-201ENST00000385063 110 ntBASIC1.02□□□□□ -2.25
ACLYP53396 RNU11-5P-201ENST00000391216 129 ntBASIC1.02□□□□□ -2.25
ACLYP53396 MIR450B-201ENST00000401182 78 ntBASIC1.02□□□□□ -2.25
ACLYP53396 RNU4-55P-201ENST00000410731 137 ntBASIC1.02□□□□□ -2.25
ACLYP53396 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms