Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AL162725.1-201ENST00000435405 301 ntBASIC0.09□□□□□ -2.39
NUP98P52948 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.09□□□□□ -2.39
NUP98P52948 MTCO1P19-201ENST00000443487 500 ntBASIC0.09□□□□□ -2.39
NUP98P52948 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.09□□□□□ -2.39
NUP98P52948 AL133217.1-201ENST00000450980 425 ntBASIC0.09□□□□□ -2.39
NUP98P52948 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.09□□□□□ -2.39
NUP98P52948 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.09□□□□□ -2.39
NUP98P52948 AC004832.4-201ENST00000608952 331 ntBASIC0.09□□□□□ -2.39
NUP98P52948 MTND4P4-201ENST00000439033 1366 ntBASIC0.08□□□□□ -2.4
NUP98P52948 RNU6-1287P-201ENST00000362914 107 ntBASIC0.08□□□□□ -2.4
NUP98P52948 SNORA33-201ENST00000363664 130 ntBASIC0.08□□□□□ -2.4
NUP98P52948 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.08□□□□□ -2.4
NUP98P52948 RNU6-1060P-201ENST00000384664 107 ntBASIC0.08□□□□□ -2.4
NUP98P52948 MIR891A-201ENST00000401237 79 ntBASIC0.08□□□□□ -2.4
NUP98P52948 RNA5SP222-201ENST00000411039 105 ntBASIC0.08□□□□□ -2.4
NUP98P52948 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.08□□□□□ -2.4
NUP98P52948 AC067940.1-201ENST00000458411 300 ntBASIC0.08□□□□□ -2.4
NUP98P52948 RNU6-221P-201ENST00000459541 99 ntBASIC0.08□□□□□ -2.4
NUP98P52948 CYCTP-201ENST00000504253 315 ntBASIC0.08□□□□□ -2.4
NUP98P52948 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.08□□□□□ -2.4
NUP98P52948 SNORA70.12-201ENST00000516084 153 ntBASIC0.08□□□□□ -2.4
NUP98P52948 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.08□□□□□ -2.4
NUP98P52948 MIR4315-1-201ENST00000636800 73 ntBASIC0.08□□□□□ -2.4
NUP98P52948 MIR4315-2-201ENST00000640925 73 ntBASIC0.08□□□□□ -2.4
NUP98P52948 MIR411-201ENST00000362239 96 ntBASIC0.08□□□□□ -2.4
NUP98P52948 RNU6-179P-201ENST00000363350 107 ntBASIC0.08□□□□□ -2.4
NUP98P52948 MIR586-201ENST00000385035 97 ntBASIC0.08□□□□□ -2.4
NUP98P52948 MRPL42P3-201ENST00000401492 326 ntBASIC0.08□□□□□ -2.4
NUP98P52948 MTCYBP36-201ENST00000404146 440 ntBASIC0.08□□□□□ -2.4
NUP98P52948 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.08□□□□□ -2.4
NUP98P52948 snoU109.3-201ENST00000459477 145 ntBASIC0.08□□□□□ -2.4
NUP98P52948 RNU6-917P-201ENST00000516294 104 ntBASIC0.08□□□□□ -2.4
NUP98P52948 BNIP3P40-201ENST00000596017 556 ntBASIC0.08□□□□□ -2.4
NUP98P52948 SNORA28-201ENST00000606769 126 ntBASIC0.08□□□□□ -2.4
NUP98P52948 AC080013.3-201ENST00000606839 578 ntBASIC0.08□□□□□ -2.4
NUP98P52948 AC017083.3-201ENST00000609955 700 ntBASIC0.08□□□□□ -2.4
NUP98P52948 AC138649.3-201ENST00000622154 254 ntBASIC0.08□□□□□ -2.4
NUP98P52948 snoZ196.1-201ENST00000625269 89 ntBASIC0.08□□□□□ -2.4
NUP98P52948 RNU2-8P-201ENST00000410727 190 ntBASIC0.07□□□□□ -2.4
NUP98P52948 RNU6-57P-201ENST00000411348 103 ntBASIC0.07□□□□□ -2.4
NUP98P52948 Z95118.1-201ENST00000421372 247 ntBASIC0.07□□□□□ -2.4
NUP98P52948 MRPS18CP6-201ENST00000423587 223 ntBASIC0.07□□□□□ -2.4
NUP98P52948 RPL23AP50-201ENST00000434149 455 ntBASIC0.07□□□□□ -2.4
NUP98P52948 AL049830.1-201ENST00000468034 425 ntBASIC0.07□□□□□ -2.4
NUP98P52948 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC0.07□□□□□ -2.4
NUP98P52948 OR9P1P-201ENST00000496431 281 ntBASIC0.07□□□□□ -2.4
NUP98P52948 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.07□□□□□ -2.4
NUP98P52948 RNU7-12P-201ENST00000516030 62 ntBASIC0.07□□□□□ -2.4
NUP98P52948 RNU6-758P-201ENST00000516292 89 ntBASIC0.07□□□□□ -2.4
NUP98P52948 AC105185.1-201ENST00000518705 535 ntBASIC0.07□□□□□ -2.4
NUP98P52948 MTND4LP18-201ENST00000526864 291 ntBASIC0.07□□□□□ -2.4
NUP98P52948 RSL24D1P11-201ENST00000591045 491 ntBASIC0.07□□□□□ -2.4
NUP98P52948 AP001836.1-201ENST00000604675 523 ntBASIC0.07□□□□□ -2.4
NUP98P52948 AC007014.2-201ENST00000615581 479 ntBASIC0.07□□□□□ -2.4
NUP98P52948 AC100810.6-201ENST00000638068 285 ntBASIC0.07□□□□□ -2.4
NUP98P52948 MIR103A1-201ENST00000362165 78 ntBASIC0.06□□□□□ -2.4
NUP98P52948 RNA5SP331-201ENST00000364986 107 ntBASIC0.06□□□□□ -2.4
NUP98P52948 SNORD105-201ENST00000386910 85 ntBASIC0.06□□□□□ -2.4
NUP98P52948 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.06□□□□□ -2.4
NUP98P52948 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.06□□□□□ -2.4
NUP98P52948 snoU13.25-201ENST00000458945 104 ntBASIC0.06□□□□□ -2.4
NUP98P52948 SNORA68.3-201ENST00000515906 83 ntBASIC0.06□□□□□ -2.4
NUP98P52948 RNU6-1178P-201ENST00000516674 107 ntBASIC0.06□□□□□ -2.4
NUP98P52948 MTND3P19-201ENST00000603825 345 ntBASIC0.06□□□□□ -2.4
NUP98P52948 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.06□□□□□ -2.4
NUP98P52948 AL138960.2-201ENST00000625145 535 ntBASIC0.06□□□□□ -2.4
NUP98P52948 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.06□□□□□ -2.4
NUP98P52948 RNU6-434P-201ENST00000384376 107 ntBASIC0.06□□□□□ -2.4
NUP98P52948 AC108740.1-201ENST00000498629 225 ntBASIC0.06□□□□□ -2.4
NUP98P52948 RNU7-99P-201ENST00000516271 62 ntBASIC0.06□□□□□ -2.4
NUP98P52948 RNU6-1096P-201ENST00000517089 102 ntBASIC0.06□□□□□ -2.4
NUP98P52948 MTND4LP26-201ENST00000518144 282 ntBASIC0.06□□□□□ -2.4
NUP98P52948 AP003181.2-201ENST00000528941 181 ntBASIC0.06□□□□□ -2.4
NUP98P52948 AL391903.3-201ENST00000612158 163 ntBASIC0.06□□□□□ -2.4
NUP98P52948 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
NUP98P52948 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.06□□□□□ -2.4
NUP98P52948 U6.114-201ENST00000636407 96 ntBASIC0.06□□□□□ -2.4
NUP98P52948 MTND5P17-201ENST00000418405 1603 ntBASIC0.05□□□□□ -2.4
NUP98P52948 MTND5P16-201ENST00000460269 1703 ntBASIC0.05□□□□□ -2.4
NUP98P52948 RNY4P3-201ENST00000365254 95 ntBASIC0.05□□□□□ -2.4
NUP98P52948 RNU6-424P-201ENST00000384367 105 ntBASIC0.05□□□□□ -2.4
NUP98P52948 AC106883.1-201ENST00000418805 562 ntBASIC0.05□□□□□ -2.4
NUP98P52948 MTCYBP10-201ENST00000424905 650 ntBASIC0.05□□□□□ -2.4
NUP98P52948 AC009237.7-201ENST00000447357 229 ntBASIC0.05□□□□□ -2.4
NUP98P52948 MTCO2P18-201ENST00000457151 658 ntBASIC0.05□□□□□ -2.4
NUP98P52948 AC112204.1-201ENST00000502591 103 ntBASIC0.05□□□□□ -2.4
NUP98P52948 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.05□□□□□ -2.4
NUP98P52948 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.05□□□□□ -2.4
NUP98P52948 AC104695.3-201ENST00000604052 296 ntBASIC0.05□□□□□ -2.4
NUP98P52948 AC027807.2-201ENST00000616099 408 ntBASIC0.05□□□□□ -2.4
NUP98P52948 AL390237.1-201ENST00000404226 1415 ntBASIC0.04□□□□□ -2.4
NUP98P52948 SNORD114-16-201ENST00000363044 70 ntBASIC0.04□□□□□ -2.4
NUP98P52948 SNORD113.3-201ENST00000364630 78 ntBASIC0.04□□□□□ -2.4
NUP98P52948 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.04□□□□□ -2.4
NUP98P52948 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.04□□□□□ -2.4
NUP98P52948 SNORA25.17-201ENST00000517184 124 ntBASIC0.04□□□□□ -2.4
NUP98P52948 AC022878.1-201ENST00000530684 149 ntBASIC0.04□□□□□ -2.4
NUP98P52948 AC092354.1-201ENST00000606057 376 ntBASIC0.04□□□□□ -2.4
NUP98P52948 AL158211.2-201ENST00000607282 395 ntBASIC0.04□□□□□ -2.4
NUP98P52948 AL136317.1-201ENST00000612653 226 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms