Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC091152.3-201ENST00000604227 325 ntBASIC3.23□□□□□ -1.89
MRE11P49959 AC037487.3-201ENST00000606668 112 ntBASIC3.23□□□□□ -1.89
MRE11P49959 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
MRE11P49959 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
MRE11P49959 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.22□□□□□ -1.89
MRE11P49959 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
MRE11P49959 Y_RNA.199-201ENST00000364014 102 ntBASIC3.22□□□□□ -1.89
MRE11P49959 Y_RNA.230-201ENST00000364348 109 ntBASIC3.22□□□□□ -1.89
MRE11P49959 Y_RNA.270-201ENST00000364693 104 ntBASIC3.22□□□□□ -1.89
MRE11P49959 RNU6-1175P-201ENST00000365200 107 ntBASIC3.22□□□□□ -1.89
MRE11P49959 MIR196B-201ENST00000384852 84 ntBASIC3.22□□□□□ -1.89
MRE11P49959 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.22□□□□□ -1.89
MRE11P49959 AC138623.1-201ENST00000418060 216 ntBASIC3.22□□□□□ -1.89
MRE11P49959 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.22□□□□□ -1.89
MRE11P49959 Y_RNA.644-201ENST00000459006 113 ntBASIC3.22□□□□□ -1.89
MRE11P49959 RNU7-23P-201ENST00000459465 62 ntBASIC3.22□□□□□ -1.89
MRE11P49959 RPS29P26-201ENST00000477483 171 ntBASIC3.22□□□□□ -1.89
MRE11P49959 Y_RNA.674-201ENST00000516362 113 ntBASIC3.22□□□□□ -1.89
MRE11P49959 AC115990.1-201ENST00000526957 301 ntBASIC3.22□□□□□ -1.89
MRE11P49959 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.22□□□□□ -1.89
MRE11P49959 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.22□□□□□ -1.89
MRE11P49959 AC010999.1-201ENST00000611856 324 ntBASIC3.22□□□□□ -1.89
MRE11P49959 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.89
MRE11P49959 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.21□□□□□ -1.89
MRE11P49959 AC092593.1-201ENST00000515413 1815 ntBASIC3.21□□□□□ -1.89
MRE11P49959 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.21□□□□□ -1.9
MRE11P49959 MIR411-201ENST00000362239 96 ntBASIC3.21□□□□□ -1.9
MRE11P49959 RNU6-740P-201ENST00000364734 105 ntBASIC3.21□□□□□ -1.9
MRE11P49959 Y_RNA.446-201ENST00000384178 104 ntBASIC3.21□□□□□ -1.9
MRE11P49959 RNU6-886P-201ENST00000384319 105 ntBASIC3.21□□□□□ -1.9
MRE11P49959 RNA5SP181-201ENST00000410246 98 ntBASIC3.21□□□□□ -1.9
MRE11P49959 AL390729.2-201ENST00000416137 156 ntBASIC3.21□□□□□ -1.9
MRE11P49959 CYCSP48-201ENST00000417124 323 ntBASIC3.21□□□□□ -1.9
MRE11P49959 PTGES3P4-201ENST00000426243 356 ntBASIC3.21□□□□□ -1.9
MRE11P49959 AL513328.1-201ENST00000446460 224 ntBASIC3.21□□□□□ -1.9
MRE11P49959 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.21□□□□□ -1.9
MRE11P49959 SNORD19.2-201ENST00000516978 73 ntBASIC3.21□□□□□ -1.9
MRE11P49959 CBX3P4-201ENST00000538909 354 ntBASIC3.21□□□□□ -1.9
MRE11P49959 AC026470.2-201ENST00000561492 181 ntBASIC3.21□□□□□ -1.9
MRE11P49959 AC010620.2-201ENST00000600135 313 ntBASIC3.21□□□□□ -1.9
MRE11P49959 AC110079.1-202ENST00000635213 138 ntBASIC3.21□□□□□ -1.9
MRE11P49959 SNORD98-201ENST00000636377 67 ntBASIC3.21□□□□□ -1.9
MRE11P49959 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
MRE11P49959 ZNF271P-202ENST00000465539 1970 ntBASIC3.21□□□□□ -1.9
MRE11P49959 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.2□□□□□ -1.9
MRE11P49959 SNORA25.1-201ENST00000362326 128 ntBASIC3.2□□□□□ -1.9
MRE11P49959 Y_RNA.355-201ENST00000365462 98 ntBASIC3.2□□□□□ -1.9
MRE11P49959 RNU6-748P-201ENST00000384648 107 ntBASIC3.2□□□□□ -1.9
MRE11P49959 RNU6-19P-201ENST00000384718 107 ntBASIC3.2□□□□□ -1.9
MRE11P49959 Y_RNA.595-201ENST00000410403 105 ntBASIC3.2□□□□□ -1.9
MRE11P49959 Y_RNA.793-201ENST00000411222 111 ntBASIC3.2□□□□□ -1.9
MRE11P49959 CR769767.1-201ENST00000436337 346 ntBASIC3.2□□□□□ -1.9
MRE11P49959 AC007395.1-201ENST00000451333 677 ntBASIC3.2□□□□□ -1.9
MRE11P49959 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.2□□□□□ -1.9
MRE11P49959 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.2□□□□□ -1.9
MRE11P49959 AC007215.1-201ENST00000464893 276 ntBASIC3.2□□□□□ -1.9
MRE11P49959 AC107626.1-201ENST00000471084 183 ntBASIC3.2□□□□□ -1.9
MRE11P49959 RAC1P5-201ENST00000512182 576 ntBASIC3.2□□□□□ -1.9
MRE11P49959 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.2□□□□□ -1.9
MRE11P49959 Y_RNA.683-201ENST00000516508 93 ntBASIC3.2□□□□□ -1.9
MRE11P49959 SNORA31.15-201ENST00000516771 132 ntBASIC3.2□□□□□ -1.9
MRE11P49959 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.2□□□□□ -1.9
MRE11P49959 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.2□□□□□ -1.9
MRE11P49959 UBL5P2-201ENST00000583788 219 ntBASIC3.2□□□□□ -1.9
MRE11P49959 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.2□□□□□ -1.9
MRE11P49959 AC008749.1-201ENST00000597650 306 ntBASIC3.2□□□□□ -1.9
MRE11P49959 AL162424.1-201ENST00000602325 221 ntBASIC3.2□□□□□ -1.9
MRE11P49959 ZNF204P-201ENST00000416749 2397 ntBASIC3.2□□□□□ -1.9
MRE11P49959 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
MRE11P49959 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
MRE11P49959 AC135776.4-201ENST00000624300 1904 ntBASIC3.19□□□□□ -1.9
MRE11P49959 AC026241.1-201ENST00000517873 2142 ntBASIC3.19□□□□□ -1.9
MRE11P49959 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
MRE11P49959 MIR22-201ENST00000362190 85 ntBASIC3.19□□□□□ -1.9
MRE11P49959 MIR26A1-201ENST00000362205 77 ntBASIC3.19□□□□□ -1.9
MRE11P49959 RNU5F-3P-201ENST00000363767 117 ntBASIC3.19□□□□□ -1.9
MRE11P49959 Y_RNA.275-201ENST00000364726 110 ntBASIC3.19□□□□□ -1.9
MRE11P49959 MIR549A-201ENST00000385268 96 ntBASIC3.19□□□□□ -1.9
MRE11P49959 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.19□□□□□ -1.9
MRE11P49959 PCNPP3-201ENST00000393579 471 ntBASIC3.19□□□□□ -1.9
MRE11P49959 AL133475.1-201ENST00000404414 305 ntBASIC3.19□□□□□ -1.9
MRE11P49959 MIR548M-201ENST00000408260 86 ntBASIC3.19□□□□□ -1.9
MRE11P49959 RNU2-49P-201ENST00000410666 184 ntBASIC3.19□□□□□ -1.9
MRE11P49959 AC104332.1-201ENST00000440471 797 ntBASIC3.19□□□□□ -1.9
MRE11P49959 RPL23AP3-201ENST00000453844 468 ntBASIC3.19□□□□□ -1.9
MRE11P49959 AIG1P1-201ENST00000503376 148 ntBASIC3.19□□□□□ -1.9
MRE11P49959 SNORA25.14-201ENST00000516481 132 ntBASIC3.19□□□□□ -1.9
MRE11P49959 RNU6-56P-201ENST00000516986 93 ntBASIC3.19□□□□□ -1.9
MRE11P49959 AC233702.2-202ENST00000562547 291 ntBASIC3.19□□□□□ -1.9
MRE11P49959 CYP4A27P-201ENST00000567218 190 ntBASIC3.19□□□□□ -1.9
MRE11P49959 MIR3136-201ENST00000583498 78 ntBASIC3.19□□□□□ -1.9
MRE11P49959 AC005176.2-201ENST00000596933 147 ntBASIC3.19□□□□□ -1.9
MRE11P49959 MZT1P2-201ENST00000604387 248 ntBASIC3.19□□□□□ -1.9
MRE11P49959 AL109809.4-201ENST00000603520 2185 ntBASIC3.19□□□□□ -1.9
MRE11P49959 BX322639.1-202ENST00000423987 2213 ntBASIC3.19□□□□□ -1.9
MRE11P49959 MTND5P35-201ENST00000557537 1720 ntBASIC3.19□□□□□ -1.9
MRE11P49959 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
MRE11P49959 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
MRE11P49959 MIR410-201ENST00000362222 80 ntBASIC3.18□□□□□ -1.9
MRE11P49959 Y_RNA.122-201ENST00000363331 96 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms