Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PSEN1P49768 Y_RNA.267-201ENST00000364679 109 ntBASIC4.84□□□□□ -1.63
PSEN1P49768 RNU6-219P-201ENST00000364728 107 ntBASIC4.84□□□□□ -1.63
PSEN1P49768 RNU6-442P-201ENST00000383968 104 ntBASIC4.84□□□□□ -1.63
PSEN1P49768 MIR129-1-201ENST00000384972 72 ntBASIC4.84□□□□□ -1.63
PSEN1P49768 AL159169.1-201ENST00000421119 127 ntBASIC4.84□□□□□ -1.63
PSEN1P49768 RPS26P2-201ENST00000440331 348 ntBASIC4.84□□□□□ -1.63
PSEN1P49768 RPS26P28-201ENST00000470806 348 ntBASIC4.84□□□□□ -1.63
PSEN1P49768 AC006463.2-201ENST00000473326 348 ntBASIC4.84□□□□□ -1.63
PSEN1P49768 SNORA18.7-201ENST00000516910 131 ntBASIC4.84□□□□□ -1.63
PSEN1P49768 MIR7641-1-201ENST00000627518 61 ntBASIC4.84□□□□□ -1.63
PSEN1P49768 Clostridiales-1.3-201ENST00000637703 147 ntBASIC4.84□□□□□ -1.63
PSEN1P49768 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PSEN1P49768 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PSEN1P49768 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
PSEN1P49768 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PSEN1P49768 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.84□□□□□ -1.64
PSEN1P49768 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
PSEN1P49768 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
PSEN1P49768 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
PSEN1P49768 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
PSEN1P49768 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PSEN1P49768 SNORD115-19-201ENST00000363098 82 ntBASIC4.83□□□□□ -1.64
PSEN1P49768 SNORD115-18-201ENST00000363293 82 ntBASIC4.83□□□□□ -1.64
PSEN1P49768 SNORD115-17-201ENST00000364612 82 ntBASIC4.83□□□□□ -1.64
PSEN1P49768 SNORA14A-201ENST00000364773 135 ntBASIC4.83□□□□□ -1.64
PSEN1P49768 SNORA56-201ENST00000383966 129 ntBASIC4.83□□□□□ -1.64
PSEN1P49768 Y_RNA.547-201ENST00000384654 119 ntBASIC4.83□□□□□ -1.64
PSEN1P49768 RNA5SP332-201ENST00000391063 115 ntBASIC4.83□□□□□ -1.64
PSEN1P49768 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC4.83□□□□□ -1.64
PSEN1P49768 AL445646.1-201ENST00000431784 216 ntBASIC4.83□□□□□ -1.64
PSEN1P49768 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.83□□□□□ -1.64
PSEN1P49768 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.83□□□□□ -1.64
PSEN1P49768 RNU6-856P-201ENST00000516959 98 ntBASIC4.83□□□□□ -1.64
PSEN1P49768 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.83□□□□□ -1.64
PSEN1P49768 MIR4777-201ENST00000583710 86 ntBASIC4.83□□□□□ -1.64
PSEN1P49768 MIR5096-201ENST00000583713 70 ntBASIC4.83□□□□□ -1.64
PSEN1P49768 AL160290.3-201ENST00000604869 165 ntBASIC4.83□□□□□ -1.64
PSEN1P49768 MIR1255B1-201ENST00000636325 63 ntBASIC4.83□□□□□ -1.64
PSEN1P49768 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
PSEN1P49768 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PSEN1P49768 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
PSEN1P49768 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
PSEN1P49768 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.83□□□□□ -1.64
PSEN1P49768 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
PSEN1P49768 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PSEN1P49768 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
PSEN1P49768 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PSEN1P49768 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.82□□□□□ -1.64
PSEN1P49768 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC4.82□□□□□ -1.64
PSEN1P49768 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PSEN1P49768 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
PSEN1P49768 RNA5SP388-201ENST00000362584 119 ntBASIC4.82□□□□□ -1.64
PSEN1P49768 RNU4-67P-201ENST00000364569 141 ntBASIC4.82□□□□□ -1.64
PSEN1P49768 SNORD45B-201ENST00000364617 72 ntBASIC4.82□□□□□ -1.64
PSEN1P49768 snoU13.1-201ENST00000459157 104 ntBASIC4.82□□□□□ -1.64
PSEN1P49768 RNU6-965P-201ENST00000516721 96 ntBASIC4.82□□□□□ -1.64
PSEN1P49768 SNORA31.21-201ENST00000517180 77 ntBASIC4.82□□□□□ -1.64
PSEN1P49768 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.82□□□□□ -1.64
PSEN1P49768 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC4.82□□□□□ -1.64
PSEN1P49768 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.82□□□□□ -1.64
PSEN1P49768 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PSEN1P49768 AP005019.3-201ENST00000620418 560 ntBASIC4.82□□□□□ -1.64
PSEN1P49768 AC091932.4-201ENST00000623386 200 ntBASIC4.82□□□□□ -1.64
PSEN1P49768 MIR1248-201ENST00000629190 106 ntBASIC4.82□□□□□ -1.64
PSEN1P49768 MIR6079-201ENST00000635807 62 ntBASIC4.82□□□□□ -1.64
PSEN1P49768 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.82□□□□□ -1.64
PSEN1P49768 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PSEN1P49768 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PSEN1P49768 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
PSEN1P49768 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PSEN1P49768 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
PSEN1P49768 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PSEN1P49768 AC021146.4-201ENST00000309229 279 ntBASIC4.81□□□□□ -1.64
PSEN1P49768 RNU1-83P-201ENST00000363426 164 ntBASIC4.81□□□□□ -1.64
PSEN1P49768 RNU1-32P-201ENST00000363937 159 ntBASIC4.81□□□□□ -1.64
PSEN1P49768 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.81□□□□□ -1.64
PSEN1P49768 RNA5SP73-201ENST00000516744 108 ntBASIC4.81□□□□□ -1.64
PSEN1P49768 Y_RNA.705-201ENST00000516862 110 ntBASIC4.81□□□□□ -1.64
PSEN1P49768 IGHVII-40-1-201ENST00000517316 58 ntBASIC4.81□□□□□ -1.64
PSEN1P49768 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC4.81□□□□□ -1.64
PSEN1P49768 AL360157.1-201ENST00000565962 87 ntBASIC4.81□□□□□ -1.64
PSEN1P49768 AC209154.1-201ENST00000582156 337 ntBASIC4.81□□□□□ -1.64
PSEN1P49768 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC4.81□□□□□ -1.64
PSEN1P49768 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.81□□□□□ -1.64
PSEN1P49768 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.81□□□□□ -1.64
PSEN1P49768 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PSEN1P49768 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
PSEN1P49768 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4.8□□□□□ -1.64
PSEN1P49768 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
PSEN1P49768 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PSEN1P49768 SNORD14E-201ENST00000364009 85 ntBASIC4.8□□□□□ -1.64
PSEN1P49768 MIR605-201ENST00000385078 83 ntBASIC4.8□□□□□ -1.64
PSEN1P49768 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.8□□□□□ -1.64
PSEN1P49768 PPIAP15-201ENST00000479662 484 ntBASIC4.8□□□□□ -1.64
PSEN1P49768 RPS23P4-201ENST00000487908 423 ntBASIC4.8□□□□□ -1.64
PSEN1P49768 RNU6-1018P-201ENST00000516577 106 ntBASIC4.8□□□□□ -1.64
PSEN1P49768 RNU7-128P-201ENST00000517247 62 ntBASIC4.8□□□□□ -1.64
PSEN1P49768 AP003484.1-201ENST00000530974 250 ntBASIC4.8□□□□□ -1.64
PSEN1P49768 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 143.1 ms