Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
MMP13P45452 Y_RNA.275-201ENST00000364726 110 ntBASIC2.62□□□□□ -1.99
MMP13P45452 Y_RNA.569-201ENST00000384749 103 ntBASIC2.62□□□□□ -1.99
MMP13P45452 MIR196B-201ENST00000384852 84 ntBASIC2.62□□□□□ -1.99
MMP13P45452 MIR548M-201ENST00000408260 86 ntBASIC2.62□□□□□ -1.99
MMP13P45452 RNU2-49P-201ENST00000410666 184 ntBASIC2.62□□□□□ -1.99
MMP13P45452 RNU6-1199P-201ENST00000411249 104 ntBASIC2.62□□□□□ -1.99
MMP13P45452 AC004866.1-201ENST00000411748 78 ntBASIC2.62□□□□□ -1.99
MMP13P45452 ELOCP21-201ENST00000412558 336 ntBASIC2.62□□□□□ -1.99
MMP13P45452 COX6CP10-201ENST00000416832 224 ntBASIC2.62□□□□□ -1.99
MMP13P45452 AC012306.1-201ENST00000423267 114 ntBASIC2.62□□□□□ -1.99
MMP13P45452 AC019205.3-201ENST00000424573 156 ntBASIC2.62□□□□□ -1.99
MMP13P45452 AL161651.1-201ENST00000440882 223 ntBASIC2.62□□□□□ -1.99
MMP13P45452 AC107626.1-201ENST00000471084 183 ntBASIC2.62□□□□□ -1.99
MMP13P45452 AC091959.1-201ENST00000495857 238 ntBASIC2.62□□□□□ -1.99
MMP13P45452 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.62□□□□□ -1.99
MMP13P45452 RNU5F-2P-201ENST00000516066 82 ntBASIC2.62□□□□□ -1.99
MMP13P45452 RNY3P16-201ENST00000516338 101 ntBASIC2.62□□□□□ -1.99
MMP13P45452 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.62□□□□□ -1.99
MMP13P45452 AC103810.1-201ENST00000579873 453 ntBASIC2.62□□□□□ -1.99
MMP13P45452 MIR4282-201ENST00000583613 67 ntBASIC2.62□□□□□ -1.99
MMP13P45452 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.62□□□□□ -1.99
MMP13P45452 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.62□□□□□ -1.99
MMP13P45452 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.62□□□□□ -1.99
MMP13P45452 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.61□□□□□ -1.99
MMP13P45452 ZNF204P-201ENST00000416749 2397 ntBASIC2.61□□□□□ -1.99
MMP13P45452 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
MMP13P45452 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
MMP13P45452 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
MMP13P45452 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.61□□□□□ -1.99
MMP13P45452 AC092268.1-201ENST00000342691 405 ntBASIC2.61□□□□□ -1.99
MMP13P45452 RNU6-137P-201ENST00000363680 108 ntBASIC2.61□□□□□ -1.99
MMP13P45452 Y_RNA.270-201ENST00000364693 104 ntBASIC2.61□□□□□ -1.99
MMP13P45452 Y_RNA.292-201ENST00000364904 97 ntBASIC2.61□□□□□ -1.99
MMP13P45452 RNU6-750P-201ENST00000390946 107 ntBASIC2.61□□□□□ -1.99
MMP13P45452 RNA5SP390-201ENST00000410191 113 ntBASIC2.61□□□□□ -1.99
MMP13P45452 RPS26P42-201ENST00000413485 326 ntBASIC2.61□□□□□ -1.99
MMP13P45452 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.61□□□□□ -1.99
MMP13P45452 AC108938.1-201ENST00000451204 136 ntBASIC2.61□□□□□ -1.99
MMP13P45452 AL109933.2-201ENST00000452651 260 ntBASIC2.61□□□□□ -1.99
MMP13P45452 AL138752.1-201ENST00000452964 351 ntBASIC2.61□□□□□ -1.99
MMP13P45452 RNU7-120P-201ENST00000459334 63 ntBASIC2.61□□□□□ -1.99
MMP13P45452 AC091179.3-201ENST00000474761 144 ntBASIC2.61□□□□□ -1.99
MMP13P45452 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.61□□□□□ -1.99
MMP13P45452 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.61□□□□□ -1.99
MMP13P45452 RNU6-861P-201ENST00000516745 106 ntBASIC2.61□□□□□ -1.99
MMP13P45452 SCARNA11.3-201ENST00000517276 130 ntBASIC2.61□□□□□ -1.99
MMP13P45452 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.61□□□□□ -1.99
MMP13P45452 NACAP3-201ENST00000552100 481 ntBASIC2.61□□□□□ -1.99
MMP13P45452 AC021231.3-201ENST00000558497 370 ntBASIC2.61□□□□□ -1.99
MMP13P45452 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.61□□□□□ -1.99
MMP13P45452 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.61□□□□□ -1.99
MMP13P45452 MIR3145-201ENST00000580727 82 ntBASIC2.61□□□□□ -1.99
MMP13P45452 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
MMP13P45452 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
MMP13P45452 RNU6-461P-201ENST00000364195 107 ntBASIC2.6□□□□□ -1.99
MMP13P45452 RNU6-487P-201ENST00000365430 104 ntBASIC2.6□□□□□ -1.99
MMP13P45452 RNU6-378P-201ENST00000384324 107 ntBASIC2.6□□□□□ -1.99
MMP13P45452 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.6□□□□□ -1.99
MMP13P45452 RNU5A-5P-201ENST00000411054 116 ntBASIC2.6□□□□□ -1.99
MMP13P45452 Y_RNA.793-201ENST00000411222 111 ntBASIC2.6□□□□□ -1.99
MMP13P45452 AC104332.1-201ENST00000440471 797 ntBASIC2.6□□□□□ -1.99
MMP13P45452 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.6□□□□□ -1.99
MMP13P45452 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.6□□□□□ -1.99
MMP13P45452 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.6□□□□□ -1.99
MMP13P45452 RNU5F-8P-201ENST00000515941 111 ntBASIC2.6□□□□□ -1.99
MMP13P45452 SNORA25.14-201ENST00000516481 132 ntBASIC2.6□□□□□ -1.99
MMP13P45452 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.6□□□□□ -1.99
MMP13P45452 AC087441.2-201ENST00000529141 262 ntBASIC2.6□□□□□ -1.99
MMP13P45452 AC010999.1-201ENST00000611856 324 ntBASIC2.6□□□□□ -1.99
MMP13P45452 SNORD98-201ENST00000636377 67 ntBASIC2.6□□□□□ -1.99
MMP13P45452 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
MMP13P45452 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.6□□□□□ -1.99
MMP13P45452 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.6□□□□□ -1.99
MMP13P45452 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
MMP13P45452 RNU6-545P-201ENST00000362681 104 ntBASIC2.59□□□□□ -1.99
MMP13P45452 Y_RNA.383-201ENST00000383855 97 ntBASIC2.59□□□□□ -1.99
MMP13P45452 RNU6-662P-201ENST00000384253 104 ntBASIC2.59□□□□□ -1.99
MMP13P45452 RNU6-21P-201ENST00000384710 107 ntBASIC2.59□□□□□ -1.99
MMP13P45452 AL033519.2-201ENST00000403958 392 ntBASIC2.59□□□□□ -1.99
MMP13P45452 AC007215.1-201ENST00000464893 276 ntBASIC2.59□□□□□ -1.99
MMP13P45452 RPL23AP70-201ENST00000483361 460 ntBASIC2.59□□□□□ -1.99
MMP13P45452 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.59□□□□□ -1.99
MMP13P45452 DEFB131C-201ENST00000528817 165 ntBASIC2.59□□□□□ -1.99
MMP13P45452 AP002392.1-201ENST00000537692 208 ntBASIC2.59□□□□□ -1.99
MMP13P45452 AC090616.3-201ENST00000582184 217 ntBASIC2.59□□□□□ -1.99
MMP13P45452 MIR3616-201ENST00000584070 92 ntBASIC2.59□□□□□ -1.99
MMP13P45452 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.59□□□□□ -1.99
MMP13P45452 AL162424.1-201ENST00000602325 221 ntBASIC2.59□□□□□ -1.99
MMP13P45452 AC022441.3-201ENST00000605737 136 ntBASIC2.59□□□□□ -1.99
MMP13P45452 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.59□□□□□ -1.99
MMP13P45452 MIR3199-2-201ENST00000636243 86 ntBASIC2.59□□□□□ -1.99
MMP13P45452 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
MMP13P45452 Z82195.2-201ENST00000612348 18351 ntBASIC2.59□□□□□ -2
MMP13P45452 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -2
MMP13P45452 MTND5P35-201ENST00000557537 1720 ntBASIC2.59□□□□□ -2
MMP13P45452 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
MMP13P45452 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.58□□□□□ -2
MMP13P45452 UBE2WP1-201ENST00000362030 340 ntBASIC2.58□□□□□ -2
MMP13P45452 MIR410-201ENST00000362222 80 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms