Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 RNU7-14P-201ENST00000459331 62 ntBASIC3.16□□□□□ -1.9
LTBRP36941 RNU6-861P-201ENST00000516745 106 ntBASIC3.16□□□□□ -1.9
LTBRP36941 RNU6-586P-201ENST00000517265 104 ntBASIC3.16□□□□□ -1.9
LTBRP36941 AP005660.1-201ENST00000522972 293 ntBASIC3.16□□□□□ -1.9
LTBRP36941 MIR4738-201ENST00000579134 87 ntBASIC3.16□□□□□ -1.9
LTBRP36941 MIR3199-1-201ENST00000582434 88 ntBASIC3.16□□□□□ -1.9
LTBRP36941 AL713866.2-201ENST00000603579 219 ntBASIC3.16□□□□□ -1.9
LTBRP36941 AC072026.1-201ENST00000605023 201 ntBASIC3.16□□□□□ -1.9
LTBRP36941 AL008718.3-201ENST00000610217 321 ntBASIC3.16□□□□□ -1.9
LTBRP36941 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.16□□□□□ -1.9
LTBRP36941 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
LTBRP36941 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
LTBRP36941 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.15□□□□□ -1.91
LTBRP36941 Y_RNA.243-201ENST00000364481 109 ntBASIC3.15□□□□□ -1.91
LTBRP36941 Y_RNA.262-201ENST00000364641 102 ntBASIC3.15□□□□□ -1.91
LTBRP36941 SNORA51.4-201ENST00000364993 124 ntBASIC3.15□□□□□ -1.91
LTBRP36941 Y_RNA.304-201ENST00000365011 112 ntBASIC3.15□□□□□ -1.91
LTBRP36941 Y_RNA.308-201ENST00000365043 101 ntBASIC3.15□□□□□ -1.91
LTBRP36941 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.15□□□□□ -1.91
LTBRP36941 RNU4-61P-201ENST00000411243 107 ntBASIC3.15□□□□□ -1.91
LTBRP36941 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.15□□□□□ -1.91
LTBRP36941 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
LTBRP36941 RPS29P12-201ENST00000460178 152 ntBASIC3.15□□□□□ -1.91
LTBRP36941 HMGN2P9-201ENST00000476875 229 ntBASIC3.15□□□□□ -1.91
LTBRP36941 SEM1P1-201ENST00000506694 209 ntBASIC3.15□□□□□ -1.91
LTBRP36941 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.15□□□□□ -1.91
LTBRP36941 SCGB1D5P-201ENST00000515134 247 ntBASIC3.15□□□□□ -1.91
LTBRP36941 MIR2276-201ENST00000516886 89 ntBASIC3.15□□□□□ -1.91
LTBRP36941 AC009127.3-201ENST00000570531 403 ntBASIC3.15□□□□□ -1.91
LTBRP36941 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.15□□□□□ -1.91
LTBRP36941 U7.8-201ENST00000619968 63 ntBASIC3.15□□□□□ -1.91
LTBRP36941 MIR7157-201ENST00000635801 60 ntBASIC3.15□□□□□ -1.91
LTBRP36941 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
LTBRP36941 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.15□□□□□ -1.91
LTBRP36941 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.14□□□□□ -1.91
LTBRP36941 AC073325.2-201ENST00000339545 159 ntBASIC3.14□□□□□ -1.91
LTBRP36941 RNU6-918P-201ENST00000391219 106 ntBASIC3.14□□□□□ -1.91
LTBRP36941 RNU6-493P-201ENST00000391321 108 ntBASIC3.14□□□□□ -1.91
LTBRP36941 MIR1283-1-201ENST00000408494 87 ntBASIC3.14□□□□□ -1.91
LTBRP36941 RNU2-52P-201ENST00000410680 190 ntBASIC3.14□□□□□ -1.91
LTBRP36941 MICF-203ENST00000432679 129 ntBASIC3.14□□□□□ -1.91
LTBRP36941 AL365265.1-201ENST00000621045 234 ntBASIC3.14□□□□□ -1.91
LTBRP36941 U6.115-201ENST00000636045 103 ntBASIC3.14□□□□□ -1.91
LTBRP36941 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
LTBRP36941 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
LTBRP36941 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LTBRP36941 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LTBRP36941 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
LTBRP36941 AC010329.5-201ENST00000623497 2174 ntBASIC3.13□□□□□ -1.91
LTBRP36941 RNU6-234P-201ENST00000365229 104 ntBASIC3.13□□□□□ -1.91
LTBRP36941 RNU6-851P-201ENST00000384565 107 ntBASIC3.13□□□□□ -1.91
LTBRP36941 Z98941.1-201ENST00000407764 100 ntBASIC3.13□□□□□ -1.91
LTBRP36941 U6atac.2-201ENST00000408644 118 ntBASIC3.13□□□□□ -1.91
LTBRP36941 AC087499.2-201ENST00000432861 149 ntBASIC3.13□□□□□ -1.91
LTBRP36941 AC090515.1-201ENST00000465295 476 ntBASIC3.13□□□□□ -1.91
LTBRP36941 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.13□□□□□ -1.91
LTBRP36941 SCARNA3-201ENST00000517097 143 ntBASIC3.13□□□□□ -1.91
LTBRP36941 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LTBRP36941 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.13□□□□□ -1.91
LTBRP36941 AC010620.2-201ENST00000600135 313 ntBASIC3.13□□□□□ -1.91
LTBRP36941 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.13□□□□□ -1.91
LTBRP36941 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
LTBRP36941 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
LTBRP36941 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LTBRP36941 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.12□□□□□ -1.91
LTBRP36941 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LTBRP36941 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
LTBRP36941 Y_RNA.464-201ENST00000384282 110 ntBASIC3.12□□□□□ -1.91
LTBRP36941 MIR300-201ENST00000401138 83 ntBASIC3.12□□□□□ -1.91
LTBRP36941 MIR1185-2-201ENST00000408687 86 ntBASIC3.12□□□□□ -1.91
LTBRP36941 SNORD109B-201ENST00000458961 67 ntBASIC3.12□□□□□ -1.91
LTBRP36941 SNORD109A-201ENST00000459128 67 ntBASIC3.12□□□□□ -1.91
LTBRP36941 AC021205.2-201ENST00000480069 347 ntBASIC3.12□□□□□ -1.91
LTBRP36941 AC074198.2-201ENST00000508153 258 ntBASIC3.12□□□□□ -1.91
LTBRP36941 AC105245.1-201ENST00000581934 244 ntBASIC3.12□□□□□ -1.91
LTBRP36941 MIR4753-201ENST00000585119 83 ntBASIC3.12□□□□□ -1.91
LTBRP36941 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.12□□□□□ -1.91
LTBRP36941 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.12□□□□□ -1.91
LTBRP36941 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LTBRP36941 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.12□□□□□ -1.91
LTBRP36941 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
LTBRP36941 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
LTBRP36941 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
LTBRP36941 Y_RNA.233-201ENST00000364407 101 ntBASIC3.11□□□□□ -1.91
LTBRP36941 SNORA68.1-201ENST00000364537 132 ntBASIC3.11□□□□□ -1.91
LTBRP36941 SNORA70B-201ENST00000384210 135 ntBASIC3.11□□□□□ -1.91
LTBRP36941 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
LTBRP36941 RNU6-763P-201ENST00000390865 106 ntBASIC3.11□□□□□ -1.91
LTBRP36941 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.11□□□□□ -1.91
LTBRP36941 AL135790.2-201ENST00000437701 267 ntBASIC3.11□□□□□ -1.91
LTBRP36941 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.11□□□□□ -1.91
LTBRP36941 AC074290.1-201ENST00000448883 135 ntBASIC3.11□□□□□ -1.91
LTBRP36941 Y_RNA.637-201ENST00000459424 114 ntBASIC3.11□□□□□ -1.91
LTBRP36941 HMGB3P3-201ENST00000510526 400 ntBASIC3.11□□□□□ -1.91
LTBRP36941 AC109329.2-201ENST00000519658 482 ntBASIC3.11□□□□□ -1.91
LTBRP36941 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.11□□□□□ -1.91
LTBRP36941 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.11□□□□□ -1.91
LTBRP36941 MIR4308-201ENST00000580634 81 ntBASIC3.11□□□□□ -1.91
LTBRP36941 AC069294.1-201ENST00000608397 350 ntBASIC3.11□□□□□ -1.91
LTBRP36941 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 139.6 ms