Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 SNRPGP20-201ENST00000604477 205 ntBASIC1.65□□□□□ -2.15
HMGCLP35914 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.65□□□□□ -2.15
HMGCLP35914 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.65□□□□□ -2.15
HMGCLP35914 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.65□□□□□ -2.15
HMGCLP35914 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.65□□□□□ -2.15
HMGCLP35914 RNU6-874P-201ENST00000362390 105 ntBASIC1.64□□□□□ -2.15
HMGCLP35914 RNU1-58P-201ENST00000362413 163 ntBASIC1.64□□□□□ -2.15
HMGCLP35914 RNU1-62P-201ENST00000362599 164 ntBASIC1.64□□□□□ -2.15
HMGCLP35914 RNY1P16-201ENST00000363063 111 ntBASIC1.64□□□□□ -2.15
HMGCLP35914 SNORD114-6-201ENST00000364393 72 ntBASIC1.64□□□□□ -2.15
HMGCLP35914 MIR10B-201ENST00000385011 110 ntBASIC1.64□□□□□ -2.15
HMGCLP35914 MIR586-201ENST00000385035 97 ntBASIC1.64□□□□□ -2.15
HMGCLP35914 RNA5SP465-201ENST00000391195 109 ntBASIC1.64□□□□□ -2.15
HMGCLP35914 MIR300-201ENST00000401138 83 ntBASIC1.64□□□□□ -2.15
HMGCLP35914 Y_RNA.646-201ENST00000410980 101 ntBASIC1.64□□□□□ -2.15
HMGCLP35914 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
HMGCLP35914 AF228730.4-201ENST00000421457 183 ntBASIC1.64□□□□□ -2.15
HMGCLP35914 MTCO3P29-201ENST00000432119 779 ntBASIC1.64□□□□□ -2.15
HMGCLP35914 AC004386.2-201ENST00000441858 148 ntBASIC1.64□□□□□ -2.15
HMGCLP35914 AC245102.2-201ENST00000448956 180 ntBASIC1.64□□□□□ -2.15
HMGCLP35914 AC067942.3-201ENST00000512025 362 ntBASIC1.64□□□□□ -2.15
HMGCLP35914 RNU6-991P-201ENST00000516168 107 ntBASIC1.64□□□□□ -2.15
HMGCLP35914 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.64□□□□□ -2.15
HMGCLP35914 AL117336.2-201ENST00000602435 335 ntBASIC1.64□□□□□ -2.15
HMGCLP35914 AC022513.1-201ENST00000624512 117 ntBASIC1.64□□□□□ -2.15
HMGCLP35914 AL359697.1-201ENST00000624879 587 ntBASIC1.64□□□□□ -2.15
HMGCLP35914 LINC02555-201ENST00000563933 1951 ntBASIC1.63□□□□□ -2.15
HMGCLP35914 Y_RNA.48-201ENST00000362710 103 ntBASIC1.63□□□□□ -2.15
HMGCLP35914 RNU6-331P-201ENST00000384724 107 ntBASIC1.63□□□□□ -2.15
HMGCLP35914 MIR1283-1-201ENST00000408494 87 ntBASIC1.63□□□□□ -2.15
HMGCLP35914 RNU6-370P-201ENST00000411008 104 ntBASIC1.63□□□□□ -2.15
HMGCLP35914 MTND4LP11-201ENST00000422184 280 ntBASIC1.63□□□□□ -2.15
HMGCLP35914 AL591806.2-201ENST00000433122 173 ntBASIC1.63□□□□□ -2.15
HMGCLP35914 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.63□□□□□ -2.15
HMGCLP35914 NDUFB4P10-201ENST00000452541 359 ntBASIC1.63□□□□□ -2.15
HMGCLP35914 RNU7-14P-201ENST00000459331 62 ntBASIC1.63□□□□□ -2.15
HMGCLP35914 AC010531.2-201ENST00000465012 153 ntBASIC1.63□□□□□ -2.15
HMGCLP35914 AC027575.1-201ENST00000481064 460 ntBASIC1.63□□□□□ -2.15
HMGCLP35914 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.63□□□□□ -2.15
HMGCLP35914 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.63□□□□□ -2.15
HMGCLP35914 SCARNA16.2-201ENST00000516520 172 ntBASIC1.63□□□□□ -2.15
HMGCLP35914 RNU6-307P-201ENST00000516743 106 ntBASIC1.63□□□□□ -2.15
HMGCLP35914 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.63□□□□□ -2.15
HMGCLP35914 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.63□□□□□ -2.15
HMGCLP35914 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.63□□□□□ -2.15
HMGCLP35914 MIR5690-201ENST00000583739 73 ntBASIC1.63□□□□□ -2.15
HMGCLP35914 AL355802.3-201ENST00000607571 545 ntBASIC1.63□□□□□ -2.15
HMGCLP35914 AC100812.1-201ENST00000607622 580 ntBASIC1.63□□□□□ -2.15
HMGCLP35914 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
HMGCLP35914 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.63□□□□□ -2.15
HMGCLP35914 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
HMGCLP35914 Y_RNA.2-201ENST00000362330 96 ntBASIC1.62□□□□□ -2.15
HMGCLP35914 RNU6-281P-201ENST00000384212 103 ntBASIC1.62□□□□□ -2.15
HMGCLP35914 Y_RNA.529-201ENST00000384586 119 ntBASIC1.62□□□□□ -2.15
HMGCLP35914 MIR190B-201ENST00000401119 79 ntBASIC1.62□□□□□ -2.15
HMGCLP35914 MTCYBP10-201ENST00000424905 650 ntBASIC1.62□□□□□ -2.15
HMGCLP35914 EIF1P2-201ENST00000428233 350 ntBASIC1.62□□□□□ -2.15
HMGCLP35914 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.62□□□□□ -2.15
HMGCLP35914 MTND3P23-201ENST00000431980 347 ntBASIC1.62□□□□□ -2.15
HMGCLP35914 HSPE1P21-201ENST00000438283 308 ntBASIC1.62□□□□□ -2.15
HMGCLP35914 AL357134.1-201ENST00000445848 426 ntBASIC1.62□□□□□ -2.15
HMGCLP35914 AC007395.1-201ENST00000451333 677 ntBASIC1.62□□□□□ -2.15
HMGCLP35914 AP000870.1-201ENST00000472927 406 ntBASIC1.62□□□□□ -2.15
HMGCLP35914 HMGN2P9-201ENST00000476875 229 ntBASIC1.62□□□□□ -2.15
HMGCLP35914 RPL17P19-201ENST00000489069 552 ntBASIC1.62□□□□□ -2.15
HMGCLP35914 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.62□□□□□ -2.15
HMGCLP35914 RNU6-1114P-201ENST00000516022 107 ntBASIC1.62□□□□□ -2.15
HMGCLP35914 RNU2-34P-201ENST00000516534 121 ntBASIC1.62□□□□□ -2.15
HMGCLP35914 RNU5F-4P-201ENST00000516581 114 ntBASIC1.62□□□□□ -2.15
HMGCLP35914 RNU6-1213P-201ENST00000517075 94 ntBASIC1.62□□□□□ -2.15
HMGCLP35914 RNU6-548P-201ENST00000517083 115 ntBASIC1.62□□□□□ -2.15
HMGCLP35914 Y_RNA.718-201ENST00000517110 102 ntBASIC1.62□□□□□ -2.15
HMGCLP35914 AK6P2-201ENST00000549020 471 ntBASIC1.62□□□□□ -2.15
HMGCLP35914 FRG2DP-202ENST00000566967 323 ntBASIC1.62□□□□□ -2.15
HMGCLP35914 MIR4285-201ENST00000581001 85 ntBASIC1.62□□□□□ -2.15
HMGCLP35914 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.62□□□□□ -2.15
HMGCLP35914 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
HMGCLP35914 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.62□□□□□ -2.15
HMGCLP35914 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.61□□□□□ -2.15
HMGCLP35914 ZNF204P-201ENST00000416749 2397 ntBASIC1.61□□□□□ -2.15
HMGCLP35914 RNA5SP493-201ENST00000364115 91 ntBASIC1.61□□□□□ -2.15
HMGCLP35914 RNA5SP190-201ENST00000365222 118 ntBASIC1.61□□□□□ -2.15
HMGCLP35914 Y_RNA.364-201ENST00000365532 101 ntBASIC1.61□□□□□ -2.15
HMGCLP35914 RNU6-1297P-201ENST00000384415 104 ntBASIC1.61□□□□□ -2.15
HMGCLP35914 RNU6-160P-201ENST00000384591 107 ntBASIC1.61□□□□□ -2.15
HMGCLP35914 RNY4P36-201ENST00000391116 96 ntBASIC1.61□□□□□ -2.15
HMGCLP35914 RN7SKP101-201ENST00000411376 320 ntBASIC1.61□□□□□ -2.15
HMGCLP35914 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.61□□□□□ -2.15
HMGCLP35914 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.61□□□□□ -2.15
HMGCLP35914 BX510359.4-201ENST00000423750 193 ntBASIC1.61□□□□□ -2.15
HMGCLP35914 MTCO3P10-201ENST00000455912 772 ntBASIC1.61□□□□□ -2.15
HMGCLP35914 snoU13.23-201ENST00000458863 104 ntBASIC1.61□□□□□ -2.15
HMGCLP35914 AC093303.1-201ENST00000514549 295 ntBASIC1.61□□□□□ -2.15
HMGCLP35914 RNU6-559P-201ENST00000516151 98 ntBASIC1.61□□□□□ -2.15
HMGCLP35914 RNU6-856P-201ENST00000516959 98 ntBASIC1.61□□□□□ -2.15
HMGCLP35914 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.61□□□□□ -2.15
HMGCLP35914 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.61□□□□□ -2.15
HMGCLP35914 AL355375.2-201ENST00000574825 175 ntBASIC1.61□□□□□ -2.15
HMGCLP35914 PISRT1.1-201ENST00000616930 107 ntBASIC1.61□□□□□ -2.15
HMGCLP35914 AC091925.1-201ENST00000623204 462 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 190.3 ms