Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 RNU6-348P-201ENST00000384386 107 ntBASIC0.17□□□□□ -2.38
HOXA6P31267 RNU6-1067P-201ENST00000384752 107 ntBASIC0.17□□□□□ -2.38
HOXA6P31267 SNORD89-201ENST00000390981 114 ntBASIC0.17□□□□□ -2.38
HOXA6P31267 RNU6-550P-201ENST00000391057 101 ntBASIC0.17□□□□□ -2.38
HOXA6P31267 Y_RNA.608-201ENST00000410647 95 ntBASIC0.17□□□□□ -2.38
HOXA6P31267 MTND3P17-201ENST00000416968 344 ntBASIC0.17□□□□□ -2.38
HOXA6P31267 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.17□□□□□ -2.38
HOXA6P31267 HAR1A.1-201ENST00000459583 118 ntBASIC0.17□□□□□ -2.38
HOXA6P31267 TRBVB-201ENST00000477100 408 ntBASIC0.17□□□□□ -2.38
HOXA6P31267 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.17□□□□□ -2.38
HOXA6P31267 CYCTP-201ENST00000504253 315 ntBASIC0.17□□□□□ -2.38
HOXA6P31267 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.17□□□□□ -2.38
HOXA6P31267 RNU4-77P-201ENST00000516692 156 ntBASIC0.17□□□□□ -2.38
HOXA6P31267 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.17□□□□□ -2.38
HOXA6P31267 7SK.7-201ENST00000603504 247 ntBASIC0.17□□□□□ -2.38
HOXA6P31267 RNU6-94P-201ENST00000607728 107 ntBASIC0.17□□□□□ -2.38
HOXA6P31267 AC017083.3-201ENST00000609955 700 ntBASIC0.17□□□□□ -2.38
HOXA6P31267 AL607023.1-201ENST00000620045 248 ntBASIC0.17□□□□□ -2.38
HOXA6P31267 AL138960.2-201ENST00000625145 535 ntBASIC0.17□□□□□ -2.38
HOXA6P31267 MTND5P17-201ENST00000418405 1603 ntBASIC0.16□□□□□ -2.38
HOXA6P31267 MTND5P16-201ENST00000460269 1703 ntBASIC0.16□□□□□ -2.38
HOXA6P31267 RNY1P12-201ENST00000364251 105 ntBASIC0.16□□□□□ -2.38
HOXA6P31267 Y_RNA.274-201ENST00000364714 101 ntBASIC0.16□□□□□ -2.38
HOXA6P31267 Y_RNA.330-201ENST00000365230 109 ntBASIC0.16□□□□□ -2.38
HOXA6P31267 SNORA2.2-201ENST00000365473 135 ntBASIC0.16□□□□□ -2.38
HOXA6P31267 RNU6-827P-201ENST00000365553 106 ntBASIC0.16□□□□□ -2.38
HOXA6P31267 RNU6-157P-201ENST00000383957 107 ntBASIC0.16□□□□□ -2.38
HOXA6P31267 MIR586-201ENST00000385035 97 ntBASIC0.16□□□□□ -2.38
HOXA6P31267 RNU6-57P-201ENST00000411348 103 ntBASIC0.16□□□□□ -2.38
HOXA6P31267 AC008134.1-201ENST00000420943 193 ntBASIC0.16□□□□□ -2.38
HOXA6P31267 MTCO2P23-201ENST00000425216 680 ntBASIC0.16□□□□□ -2.38
HOXA6P31267 AC104332.1-201ENST00000440471 797 ntBASIC0.16□□□□□ -2.38
HOXA6P31267 AC004386.2-201ENST00000441858 148 ntBASIC0.16□□□□□ -2.38
HOXA6P31267 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.16□□□□□ -2.38
HOXA6P31267 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC0.16□□□□□ -2.38
HOXA6P31267 AC245047.8-201ENST00000456455 284 ntBASIC0.16□□□□□ -2.38
HOXA6P31267 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.16□□□□□ -2.38
HOXA6P31267 AC067940.1-201ENST00000458411 300 ntBASIC0.16□□□□□ -2.38
HOXA6P31267 AC091951.3-201ENST00000504093 246 ntBASIC0.16□□□□□ -2.38
HOXA6P31267 MTND2P31-201ENST00000512602 616 ntBASIC0.16□□□□□ -2.38
HOXA6P31267 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.16□□□□□ -2.38
HOXA6P31267 AC106038.2-201ENST00000520706 568 ntBASIC0.16□□□□□ -2.38
HOXA6P31267 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.16□□□□□ -2.38
HOXA6P31267 AC022418.1-201ENST00000624118 445 ntBASIC0.16□□□□□ -2.38
HOXA6P31267 U6.114-201ENST00000636407 96 ntBASIC0.16□□□□□ -2.38
HOXA6P31267 AP000568.1-201ENST00000282964 442 ntBASIC0.15□□□□□ -2.39
HOXA6P31267 MIR103A1-201ENST00000362165 78 ntBASIC0.15□□□□□ -2.39
HOXA6P31267 RNU6-1287P-201ENST00000362914 107 ntBASIC0.15□□□□□ -2.39
HOXA6P31267 SNORA25.3-201ENST00000363205 127 ntBASIC0.15□□□□□ -2.39
HOXA6P31267 RNU6-1240P-201ENST00000365155 104 ntBASIC0.15□□□□□ -2.39
HOXA6P31267 RNU6-1327P-201ENST00000365302 105 ntBASIC0.15□□□□□ -2.39
HOXA6P31267 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
HOXA6P31267 RNU6-636P-201ENST00000384598 107 ntBASIC0.15□□□□□ -2.39
HOXA6P31267 RNU6-1060P-201ENST00000384664 107 ntBASIC0.15□□□□□ -2.39
HOXA6P31267 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
HOXA6P31267 RNA5SP222-201ENST00000411039 105 ntBASIC0.15□□□□□ -2.39
HOXA6P31267 AL354692.1-201ENST00000423044 315 ntBASIC0.15□□□□□ -2.39
HOXA6P31267 AC244098.3-201ENST00000424803 96 ntBASIC0.15□□□□□ -2.39
HOXA6P31267 CALM2P4-201ENST00000430810 426 ntBASIC0.15□□□□□ -2.39
HOXA6P31267 AC009237.7-201ENST00000447357 229 ntBASIC0.15□□□□□ -2.39
HOXA6P31267 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.15□□□□□ -2.39
HOXA6P31267 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.15□□□□□ -2.39
HOXA6P31267 TPT1P7-201ENST00000458300 517 ntBASIC0.15□□□□□ -2.39
HOXA6P31267 RNU7-57P-201ENST00000459540 60 ntBASIC0.15□□□□□ -2.39
HOXA6P31267 RNU7-128P-201ENST00000517247 62 ntBASIC0.15□□□□□ -2.39
HOXA6P31267 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.15□□□□□ -2.39
HOXA6P31267 AC027419.1-201ENST00000522976 328 ntBASIC0.15□□□□□ -2.39
HOXA6P31267 AC022616.3-201ENST00000523940 148 ntBASIC0.15□□□□□ -2.39
HOXA6P31267 AP002001.1-203ENST00000534002 267 ntBASIC0.15□□□□□ -2.39
HOXA6P31267 AC011195.1-201ENST00000578177 177 ntBASIC0.15□□□□□ -2.39
HOXA6P31267 MIR3192-201ENST00000584920 77 ntBASIC0.15□□□□□ -2.39
HOXA6P31267 SNORA28-201ENST00000606769 126 ntBASIC0.15□□□□□ -2.39
HOXA6P31267 AL031667.3-201ENST00000620124 655 ntBASIC0.15□□□□□ -2.39
HOXA6P31267 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.15□□□□□ -2.39
HOXA6P31267 RNU6-1305P-201ENST00000364353 104 ntBASIC0.14□□□□□ -2.39
HOXA6P31267 STAG3L5P-204ENST00000443759 179 ntBASIC0.14□□□□□ -2.39
HOXA6P31267 USP9YP29-201ENST00000445112 563 ntBASIC0.14□□□□□ -2.39
HOXA6P31267 MTCO2P7-201ENST00000446518 666 ntBASIC0.14□□□□□ -2.39
HOXA6P31267 LINC01399-202ENST00000458450 244 ntBASIC0.14□□□□□ -2.39
HOXA6P31267 RNU7-94P-201ENST00000459576 63 ntBASIC0.14□□□□□ -2.39
HOXA6P31267 MTCO2P6-201ENST00000463134 685 ntBASIC0.14□□□□□ -2.39
HOXA6P31267 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.14□□□□□ -2.39
HOXA6P31267 RNU6-1110P-201ENST00000516462 101 ntBASIC0.14□□□□□ -2.39
HOXA6P31267 SCARNA24.1-201ENST00000516465 137 ntBASIC0.14□□□□□ -2.39
HOXA6P31267 AC025647.1-201ENST00000517879 253 ntBASIC0.14□□□□□ -2.39
HOXA6P31267 MIR4768-201ENST00000585270 74 ntBASIC0.14□□□□□ -2.39
HOXA6P31267 AC069431.2-201ENST00000604149 1099 ntBASIC0.14□□□□□ -2.39
HOXA6P31267 AC004832.4-201ENST00000608952 331 ntBASIC0.14□□□□□ -2.39
HOXA6P31267 AL391903.3-201ENST00000612158 163 ntBASIC0.14□□□□□ -2.39
HOXA6P31267 AC009159.2-201ENST00000617603 606 ntBASIC0.14□□□□□ -2.39
HOXA6P31267 snoZ196.1-201ENST00000625269 89 ntBASIC0.14□□□□□ -2.39
HOXA6P31267 RNU6-1297P-201ENST00000384415 104 ntBASIC0.13□□□□□ -2.39
HOXA6P31267 MIR1295A-201ENST00000408463 79 ntBASIC0.13□□□□□ -2.39
HOXA6P31267 RNU6-1186P-201ENST00000410429 97 ntBASIC0.13□□□□□ -2.39
HOXA6P31267 RNA5SP504-201ENST00000410676 117 ntBASIC0.13□□□□□ -2.39
HOXA6P31267 RPS3AP3-201ENST00000411933 242 ntBASIC0.13□□□□□ -2.39
HOXA6P31267 RPS26P42-201ENST00000413485 326 ntBASIC0.13□□□□□ -2.39
HOXA6P31267 SNORD111.1-201ENST00000516421 86 ntBASIC0.13□□□□□ -2.39
HOXA6P31267 SNORA25.17-201ENST00000517184 124 ntBASIC0.13□□□□□ -2.39
HOXA6P31267 RNA5SP454-201ENST00000517231 127 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms