Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 Y_RNA.380-201ENST00000365663 111 ntBASIC2.99□□□□□ -1.93
CNGA1P29973 Y_RNA.458-201ENST00000384240 102 ntBASIC2.99□□□□□ -1.93
CNGA1P29973 Y_RNA.551-201ENST00000384661 102 ntBASIC2.99□□□□□ -1.93
CNGA1P29973 MIR1252-201ENST00000408861 65 ntBASIC2.99□□□□□ -1.93
CNGA1P29973 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.99□□□□□ -1.93
CNGA1P29973 SRIP3-201ENST00000413200 219 ntBASIC2.99□□□□□ -1.93
CNGA1P29973 Z98742.3-201ENST00000418637 326 ntBASIC2.99□□□□□ -1.93
CNGA1P29973 UQCRBP2-201ENST00000447827 297 ntBASIC2.99□□□□□ -1.93
CNGA1P29973 AL137159.1-201ENST00000452808 512 ntBASIC2.99□□□□□ -1.93
CNGA1P29973 PRELID3BP1-201ENST00000457142 540 ntBASIC2.99□□□□□ -1.93
CNGA1P29973 RPL26P26-201ENST00000480251 434 ntBASIC2.99□□□□□ -1.93
CNGA1P29973 AC093259.1-201ENST00000509755 300 ntBASIC2.99□□□□□ -1.93
CNGA1P29973 AC067942.3-201ENST00000512025 362 ntBASIC2.99□□□□□ -1.93
CNGA1P29973 SNORA4.4-201ENST00000515921 135 ntBASIC2.99□□□□□ -1.93
CNGA1P29973 RNU6-991P-201ENST00000516168 107 ntBASIC2.99□□□□□ -1.93
CNGA1P29973 AK6P2-201ENST00000549020 471 ntBASIC2.99□□□□□ -1.93
CNGA1P29973 AC233702.2-202ENST00000562547 291 ntBASIC2.99□□□□□ -1.93
CNGA1P29973 MIR4659A-201ENST00000580269 81 ntBASIC2.99□□□□□ -1.93
CNGA1P29973 AC240442.1-201ENST00000616055 283 ntBASIC2.99□□□□□ -1.93
CNGA1P29973 CTSLP2-204ENST00000629029 392 ntBASIC2.99□□□□□ -1.93
CNGA1P29973 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CNGA1P29973 SNORD87-201ENST00000364849 89 ntBASIC2.98□□□□□ -1.93
CNGA1P29973 ELOCP21-201ENST00000412558 336 ntBASIC2.98□□□□□ -1.93
CNGA1P29973 RPEP5-201ENST00000441137 268 ntBASIC2.98□□□□□ -1.93
CNGA1P29973 AL118496.2-201ENST00000448300 230 ntBASIC2.98□□□□□ -1.93
CNGA1P29973 NDUFB4P10-201ENST00000452541 359 ntBASIC2.98□□□□□ -1.93
CNGA1P29973 SRIP1-201ENST00000489235 288 ntBASIC2.98□□□□□ -1.93
CNGA1P29973 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
CNGA1P29973 MIR3670-2-201ENST00000582974 65 ntBASIC2.98□□□□□ -1.93
CNGA1P29973 MIR3670-1-201ENST00000584160 65 ntBASIC2.98□□□□□ -1.93
CNGA1P29973 MIR3670-3-201ENST00000584855 65 ntBASIC2.98□□□□□ -1.93
CNGA1P29973 MIR3670-4-201ENST00000612260 65 ntBASIC2.98□□□□□ -1.93
CNGA1P29973 AL078596.1-201ENST00000624856 447 ntBASIC2.98□□□□□ -1.93
CNGA1P29973 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
CNGA1P29973 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CNGA1P29973 Y_RNA.145-201ENST00000363527 102 ntBASIC2.97□□□□□ -1.93
CNGA1P29973 Y_RNA.162-201ENST00000363683 102 ntBASIC2.97□□□□□ -1.93
CNGA1P29973 RNU6-438P-201ENST00000365561 103 ntBASIC2.97□□□□□ -1.93
CNGA1P29973 RNU6-926P-201ENST00000384075 107 ntBASIC2.97□□□□□ -1.93
CNGA1P29973 snoU13.15-201ENST00000459407 104 ntBASIC2.97□□□□□ -1.93
CNGA1P29973 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.97□□□□□ -1.93
CNGA1P29973 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.97□□□□□ -1.93
CNGA1P29973 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.93
CNGA1P29973 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CNGA1P29973 Y_RNA.153-201ENST00000363615 91 ntBASIC2.96□□□□□ -1.94
CNGA1P29973 U3.8-201ENST00000363675 217 ntBASIC2.96□□□□□ -1.94
CNGA1P29973 RNU6-1305P-201ENST00000364353 104 ntBASIC2.96□□□□□ -1.94
CNGA1P29973 Y_RNA.471-201ENST00000384312 102 ntBASIC2.96□□□□□ -1.94
CNGA1P29973 AC123900.1-201ENST00000420390 96 ntBASIC2.96□□□□□ -1.94
CNGA1P29973 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.96□□□□□ -1.94
CNGA1P29973 U8.20-201ENST00000459445 131 ntBASIC2.96□□□□□ -1.94
CNGA1P29973 RPS29P21-201ENST00000496272 170 ntBASIC2.96□□□□□ -1.94
CNGA1P29973 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.96□□□□□ -1.94
CNGA1P29973 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.96□□□□□ -1.94
CNGA1P29973 AC018448.1-201ENST00000552843 316 ntBASIC2.96□□□□□ -1.94
CNGA1P29973 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.96□□□□□ -1.94
CNGA1P29973 MIR4753-201ENST00000585119 83 ntBASIC2.96□□□□□ -1.94
CNGA1P29973 AL355297.3-201ENST00000604082 446 ntBASIC2.96□□□□□ -1.94
CNGA1P29973 AL021879.1-201ENST00000611756 288 ntBASIC2.96□□□□□ -1.94
CNGA1P29973 PART1_1.1-201ENST00000611761 217 ntBASIC2.96□□□□□ -1.94
CNGA1P29973 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.96□□□□□ -1.94
CNGA1P29973 AC011476.5-201ENST00000615594 130 ntBASIC2.96□□□□□ -1.94
CNGA1P29973 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.95□□□□□ -1.94
CNGA1P29973 RNU4-53P-201ENST00000410828 140 ntBASIC2.95□□□□□ -1.94
CNGA1P29973 HMGN2P35-201ENST00000412164 270 ntBASIC2.95□□□□□ -1.94
CNGA1P29973 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.95□□□□□ -1.94
CNGA1P29973 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.95□□□□□ -1.94
CNGA1P29973 Y_RNA.720-201ENST00000517166 92 ntBASIC2.95□□□□□ -1.94
CNGA1P29973 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.95□□□□□ -1.94
CNGA1P29973 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.95□□□□□ -1.94
CNGA1P29973 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.95□□□□□ -1.94
CNGA1P29973 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CNGA1P29973 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.95□□□□□ -1.94
CNGA1P29973 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CNGA1P29973 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.95□□□□□ -1.94
CNGA1P29973 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CNGA1P29973 MIR410-201ENST00000362222 80 ntBASIC2.94□□□□□ -1.94
CNGA1P29973 Y_RNA.99-201ENST00000363138 105 ntBASIC2.94□□□□□ -1.94
CNGA1P29973 MIR1262-201ENST00000408276 93 ntBASIC2.94□□□□□ -1.94
CNGA1P29973 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.94□□□□□ -1.94
CNGA1P29973 RNU6-130P-201ENST00000411112 103 ntBASIC2.94□□□□□ -1.94
CNGA1P29973 EDDM3CP-201ENST00000415977 425 ntBASIC2.94□□□□□ -1.94
CNGA1P29973 MTND2P23-201ENST00000422990 651 ntBASIC2.94□□□□□ -1.94
CNGA1P29973 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.94□□□□□ -1.94
CNGA1P29973 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.94□□□□□ -1.94
CNGA1P29973 RNU6-625P-201ENST00000459412 107 ntBASIC2.94□□□□□ -1.94
CNGA1P29973 AC114982.1-201ENST00000469402 321 ntBASIC2.94□□□□□ -1.94
CNGA1P29973 RN7SL297P-201ENST00000483161 293 ntBASIC2.94□□□□□ -1.94
CNGA1P29973 RNA5SP320-201ENST00000516263 124 ntBASIC2.94□□□□□ -1.94
CNGA1P29973 RNU6-327P-201ENST00000516270 127 ntBASIC2.94□□□□□ -1.94
CNGA1P29973 Y_RNA.713-201ENST00000517013 96 ntBASIC2.94□□□□□ -1.94
CNGA1P29973 AC026271.5-201ENST00000577873 130 ntBASIC2.94□□□□□ -1.94
CNGA1P29973 MIR4635-201ENST00000583759 79 ntBASIC2.94□□□□□ -1.94
CNGA1P29973 RAC1P9-201ENST00000604990 392 ntBASIC2.94□□□□□ -1.94
CNGA1P29973 AC025754.2-201ENST00000606491 432 ntBASIC2.94□□□□□ -1.94
CNGA1P29973 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.94□□□□□ -1.94
CNGA1P29973 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
CNGA1P29973 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CNGA1P29973 MIR340-201ENST00000362125 95 ntBASIC2.93□□□□□ -1.94
CNGA1P29973 RNU6-961P-201ENST00000363893 105 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 233 ms