Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 MIR524-201ENST00000385242 87 ntBASIC1.93□□□□□ -2.1
SHC1P29353 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
SHC1P29353 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.93□□□□□ -2.1
SHC1P29353 U6atac.2-201ENST00000408644 118 ntBASIC1.93□□□□□ -2.1
SHC1P29353 RNA5SP425-201ENST00000410336 112 ntBASIC1.93□□□□□ -2.1
SHC1P29353 RNA5SP338-201ENST00000410495 85 ntBASIC1.93□□□□□ -2.1
SHC1P29353 AL135786.1-201ENST00000415892 214 ntBASIC1.93□□□□□ -2.1
SHC1P29353 OOSP1P1-201ENST00000423265 274 ntBASIC1.93□□□□□ -2.1
SHC1P29353 RPL30P4-201ENST00000429309 333 ntBASIC1.93□□□□□ -2.1
SHC1P29353 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.93□□□□□ -2.1
SHC1P29353 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.93□□□□□ -2.1
SHC1P29353 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.93□□□□□ -2.1
SHC1P29353 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.93□□□□□ -2.1
SHC1P29353 AL139109.1-201ENST00000455491 297 ntBASIC1.93□□□□□ -2.1
SHC1P29353 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.93□□□□□ -2.1
SHC1P29353 snoU13.14-201ENST00000459372 104 ntBASIC1.93□□□□□ -2.1
SHC1P29353 RNA5SP112-201ENST00000515937 99 ntBASIC1.93□□□□□ -2.1
SHC1P29353 RNA5SP200-201ENST00000516360 103 ntBASIC1.93□□□□□ -2.1
SHC1P29353 RNU6-897P-201ENST00000517135 105 ntBASIC1.93□□□□□ -2.1
SHC1P29353 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.93□□□□□ -2.1
SHC1P29353 AC115990.1-201ENST00000526957 301 ntBASIC1.93□□□□□ -2.1
SHC1P29353 AC079598.5-201ENST00000547460 117 ntBASIC1.93□□□□□ -2.1
SHC1P29353 MIR1273D-201ENST00000577266 86 ntBASIC1.93□□□□□ -2.1
SHC1P29353 AC105245.1-201ENST00000581934 244 ntBASIC1.93□□□□□ -2.1
SHC1P29353 MIR3149-201ENST00000584629 83 ntBASIC1.93□□□□□ -2.1
SHC1P29353 AC125232.2-201ENST00000592457 143 ntBASIC1.93□□□□□ -2.1
SHC1P29353 AC245884.12-201ENST00000615364 59 ntBASIC1.93□□□□□ -2.1
SHC1P29353 U6.92-201ENST00000636464 89 ntBASIC1.93□□□□□ -2.1
SHC1P29353 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
SHC1P29353 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.92□□□□□ -2.1
SHC1P29353 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.92□□□□□ -2.1
SHC1P29353 RNA5SP361-201ENST00000362686 118 ntBASIC1.92□□□□□ -2.1
SHC1P29353 RNU6-1159P-201ENST00000362933 107 ntBASIC1.92□□□□□ -2.1
SHC1P29353 U8.2-201ENST00000363156 134 ntBASIC1.92□□□□□ -2.1
SHC1P29353 RNU6-770P-201ENST00000363929 105 ntBASIC1.92□□□□□ -2.1
SHC1P29353 RNU4-50P-201ENST00000364361 141 ntBASIC1.92□□□□□ -2.1
SHC1P29353 RNA5SP160-201ENST00000364866 120 ntBASIC1.92□□□□□ -2.1
SHC1P29353 RNA5SP138-201ENST00000365098 114 ntBASIC1.92□□□□□ -2.1
SHC1P29353 Y_RNA.319-201ENST00000365138 92 ntBASIC1.92□□□□□ -2.1
SHC1P29353 Y_RNA.452-201ENST00000384202 108 ntBASIC1.92□□□□□ -2.1
SHC1P29353 RNY3P4-201ENST00000384428 101 ntBASIC1.92□□□□□ -2.1
SHC1P29353 RNU1-57P-201ENST00000384491 166 ntBASIC1.92□□□□□ -2.1
SHC1P29353 RNU6-159P-201ENST00000391080 106 ntBASIC1.92□□□□□ -2.1
SHC1P29353 RNU1-139P-201ENST00000391307 165 ntBASIC1.92□□□□□ -2.1
SHC1P29353 CBX3P9-201ENST00000402326 552 ntBASIC1.92□□□□□ -2.1
SHC1P29353 SNORA11.4-201ENST00000408823 129 ntBASIC1.92□□□□□ -2.1
SHC1P29353 RNU6-121P-201ENST00000410525 99 ntBASIC1.92□□□□□ -2.1
SHC1P29353 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.92□□□□□ -2.1
SHC1P29353 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.92□□□□□ -2.1
SHC1P29353 AC097463.2-201ENST00000421074 142 ntBASIC1.92□□□□□ -2.1
SHC1P29353 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.92□□□□□ -2.1
SHC1P29353 USP9YP16-201ENST00000430287 407 ntBASIC1.92□□□□□ -2.1
SHC1P29353 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SHC1P29353 AC096638.1-201ENST00000444678 216 ntBASIC1.92□□□□□ -2.1
SHC1P29353 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.92□□□□□ -2.1
SHC1P29353 AL021397.1-201ENST00000451806 248 ntBASIC1.92□□□□□ -2.1
SHC1P29353 USP9YP23-201ENST00000455085 407 ntBASIC1.92□□□□□ -2.1
SHC1P29353 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.92□□□□□ -2.1
SHC1P29353 AL121594.1-201ENST00000475906 575 ntBASIC1.92□□□□□ -2.1
SHC1P29353 AC098869.1-201ENST00000481627 292 ntBASIC1.92□□□□□ -2.1
SHC1P29353 RNU6-1114P-201ENST00000516022 107 ntBASIC1.92□□□□□ -2.1
SHC1P29353 RNU1-41P-201ENST00000516161 162 ntBASIC1.92□□□□□ -2.1
SHC1P29353 RNU1-48P-201ENST00000516400 162 ntBASIC1.92□□□□□ -2.1
SHC1P29353 RNU6-1012P-201ENST00000516606 109 ntBASIC1.92□□□□□ -2.1
SHC1P29353 MIR2355-201ENST00000517199 87 ntBASIC1.92□□□□□ -2.1
SHC1P29353 AC034114.1-201ENST00000520293 285 ntBASIC1.92□□□□□ -2.1
SHC1P29353 MIR3136-201ENST00000583498 78 ntBASIC1.92□□□□□ -2.1
SHC1P29353 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.92□□□□□ -2.1
SHC1P29353 AL390123.1-201ENST00000603216 237 ntBASIC1.92□□□□□ -2.1
SHC1P29353 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.92□□□□□ -2.1
SHC1P29353 MIR6132-201ENST00000622083 109 ntBASIC1.92□□□□□ -2.1
SHC1P29353 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
SHC1P29353 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
SHC1P29353 Y_RNA.152-201ENST00000363578 100 ntBASIC1.91□□□□□ -2.1
SHC1P29353 SNORD115-8-201ENST00000363856 82 ntBASIC1.91□□□□□ -2.1
SHC1P29353 RNU6-879P-201ENST00000364328 108 ntBASIC1.91□□□□□ -2.1
SHC1P29353 SNORD115-38-201ENST00000365037 82 ntBASIC1.91□□□□□ -2.1
SHC1P29353 SNORA63.7-201ENST00000365579 123 ntBASIC1.91□□□□□ -2.1
SHC1P29353 SNORA6-201ENST00000384033 151 ntBASIC1.91□□□□□ -2.1
SHC1P29353 RNU6-1093P-201ENST00000391194 107 ntBASIC1.91□□□□□ -2.1
SHC1P29353 RPS26P42-201ENST00000413485 326 ntBASIC1.91□□□□□ -2.1
SHC1P29353 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.91□□□□□ -2.1
SHC1P29353 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.91□□□□□ -2.1
SHC1P29353 RNU2-53P-201ENST00000516257 147 ntBASIC1.91□□□□□ -2.1
SHC1P29353 RNY3P15-201ENST00000516297 97 ntBASIC1.91□□□□□ -2.1
SHC1P29353 RNU1-40P-201ENST00000516816 164 ntBASIC1.91□□□□□ -2.1
SHC1P29353 RNU1-97P-201ENST00000516872 164 ntBASIC1.91□□□□□ -2.1
SHC1P29353 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.91□□□□□ -2.1
SHC1P29353 CYP4A27P-201ENST00000567218 190 ntBASIC1.91□□□□□ -2.1
SHC1P29353 MIR3923-201ENST00000579521 83 ntBASIC1.91□□□□□ -2.1
SHC1P29353 AC005520.5-201ENST00000613926 164 ntBASIC1.91□□□□□ -2.1
SHC1P29353 AC011476.5-201ENST00000615594 130 ntBASIC1.91□□□□□ -2.1
SHC1P29353 AC240442.1-201ENST00000616055 283 ntBASIC1.91□□□□□ -2.1
SHC1P29353 AC005296.1-201ENST00000616145 209 ntBASIC1.91□□□□□ -2.1
SHC1P29353 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.91□□□□□ -2.1
SHC1P29353 U4.1-201ENST00000620349 87 ntBASIC1.91□□□□□ -2.1
SHC1P29353 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SHC1P29353 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
SHC1P29353 AL596028.1-201ENST00000326971 197 ntBASIC1.9□□□□□ -2.11
SHC1P29353 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms