Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AL078604.3-201ENST00000615580 211 ntBASIC3.91□□□□□ -1.78
RXRBP28702 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.91□□□□□ -1.78
RXRBP28702 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.91□□□□□ -1.78
RXRBP28702 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
RXRBP28702 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.91□□□□□ -1.78
RXRBP28702 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RXRBP28702 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
RXRBP28702 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.78
RXRBP28702 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
RXRBP28702 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.9□□□□□ -1.78
RXRBP28702 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.9□□□□□ -1.78
RXRBP28702 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
RXRBP28702 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.9□□□□□ -1.78
RXRBP28702 RNU6-1298P-201ENST00000362456 101 ntBASIC3.9□□□□□ -1.79
RXRBP28702 Y_RNA.118-201ENST00000363300 101 ntBASIC3.9□□□□□ -1.79
RXRBP28702 RNU6-454P-201ENST00000364292 107 ntBASIC3.9□□□□□ -1.79
RXRBP28702 RNU6-793P-201ENST00000384233 104 ntBASIC3.9□□□□□ -1.79
RXRBP28702 SNORA26.5-201ENST00000391215 123 ntBASIC3.9□□□□□ -1.79
RXRBP28702 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.9□□□□□ -1.79
RXRBP28702 RNA5SP129-201ENST00000410276 118 ntBASIC3.9□□□□□ -1.79
RXRBP28702 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.9□□□□□ -1.79
RXRBP28702 RPL30P13-201ENST00000418873 348 ntBASIC3.9□□□□□ -1.79
RXRBP28702 CST9LP2-201ENST00000437612 320 ntBASIC3.9□□□□□ -1.79
RXRBP28702 RNU7-170P-201ENST00000459303 61 ntBASIC3.9□□□□□ -1.79
RXRBP28702 Y_RNA.686-201ENST00000516548 134 ntBASIC3.9□□□□□ -1.79
RXRBP28702 SNORA31.16-201ENST00000516773 139 ntBASIC3.9□□□□□ -1.79
RXRBP28702 AC021269.2-201ENST00000532318 330 ntBASIC3.9□□□□□ -1.79
RXRBP28702 AC009127.3-201ENST00000570531 403 ntBASIC3.9□□□□□ -1.79
RXRBP28702 MIR4744-201ENST00000581563 82 ntBASIC3.9□□□□□ -1.79
RXRBP28702 DNAJC19P2-201ENST00000593340 302 ntBASIC3.9□□□□□ -1.79
RXRBP28702 AC069294.1-201ENST00000608397 350 ntBASIC3.9□□□□□ -1.79
RXRBP28702 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.9□□□□□ -1.79
RXRBP28702 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.9□□□□□ -1.79
RXRBP28702 MIR3674-201ENST00000636576 68 ntBASIC3.9□□□□□ -1.79
RXRBP28702 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
RXRBP28702 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
RXRBP28702 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
RXRBP28702 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
RXRBP28702 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.89□□□□□ -1.79
RXRBP28702 CUL1P1-201ENST00000509510 2425 ntBASIC3.89□□□□□ -1.79
RXRBP28702 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RXRBP28702 RNU6-283P-201ENST00000364788 107 ntBASIC3.89□□□□□ -1.79
RXRBP28702 MIR9-1-201ENST00000385198 89 ntBASIC3.89□□□□□ -1.79
RXRBP28702 RNU6-1248P-201ENST00000391096 64 ntBASIC3.89□□□□□ -1.79
RXRBP28702 HSPE1P26-201ENST00000405341 275 ntBASIC3.89□□□□□ -1.79
RXRBP28702 NDUFB4P6-201ENST00000436819 366 ntBASIC3.89□□□□□ -1.79
RXRBP28702 RPS20P10-201ENST00000451209 253 ntBASIC3.89□□□□□ -1.79
RXRBP28702 RNU6-1211P-201ENST00000459179 105 ntBASIC3.89□□□□□ -1.79
RXRBP28702 AC146507.2-201ENST00000460608 476 ntBASIC3.89□□□□□ -1.79
RXRBP28702 RNU4-57P-201ENST00000515980 135 ntBASIC3.89□□□□□ -1.79
RXRBP28702 RNU1-61P-201ENST00000516107 151 ntBASIC3.89□□□□□ -1.79
RXRBP28702 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.89□□□□□ -1.79
RXRBP28702 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RXRBP28702 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RXRBP28702 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RXRBP28702 ADAM3A-203ENST00000461344 2157 ntBASIC3.88□□□□□ -1.79
RXRBP28702 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.88□□□□□ -1.79
RXRBP28702 Y_RNA.172-201ENST00000363765 102 ntBASIC3.88□□□□□ -1.79
RXRBP28702 RNU4-10P-201ENST00000364383 140 ntBASIC3.88□□□□□ -1.79
RXRBP28702 RNU6-245P-201ENST00000384020 107 ntBASIC3.88□□□□□ -1.79
RXRBP28702 Y_RNA.572-201ENST00000384757 98 ntBASIC3.88□□□□□ -1.79
RXRBP28702 RPS4XP2-201ENST00000458402 793 ntBASIC3.88□□□□□ -1.79
RXRBP28702 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RXRBP28702 SCARNA8-201ENST00000515924 131 ntBASIC3.88□□□□□ -1.79
RXRBP28702 RN7SKP164-201ENST00000516138 266 ntBASIC3.88□□□□□ -1.79
RXRBP28702 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.88□□□□□ -1.79
RXRBP28702 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.88□□□□□ -1.79
RXRBP28702 AL110115.1-201ENST00000614396 364 ntBASIC3.88□□□□□ -1.79
RXRBP28702 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.88□□□□□ -1.79
RXRBP28702 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
RXRBP28702 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
RXRBP28702 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RXRBP28702 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RXRBP28702 AF127577.6-201ENST00000623352 2191 ntBASIC3.87□□□□□ -1.79
RXRBP28702 AC110774.1-201ENST00000623567 2018 ntBASIC3.87□□□□□ -1.79
RXRBP28702 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RXRBP28702 RNU5F-3P-201ENST00000363767 117 ntBASIC3.87□□□□□ -1.79
RXRBP28702 RNU6-884P-201ENST00000363889 107 ntBASIC3.87□□□□□ -1.79
RXRBP28702 Y_RNA.420-201ENST00000384043 110 ntBASIC3.87□□□□□ -1.79
RXRBP28702 RNU6-1310P-201ENST00000384153 107 ntBASIC3.87□□□□□ -1.79
RXRBP28702 RNU6-80P-201ENST00000384195 107 ntBASIC3.87□□□□□ -1.79
RXRBP28702 RNU6-622P-201ENST00000384272 103 ntBASIC3.87□□□□□ -1.79
RXRBP28702 Y_RNA.466-201ENST00000384294 113 ntBASIC3.87□□□□□ -1.79
RXRBP28702 MIR626-201ENST00000385032 94 ntBASIC3.87□□□□□ -1.79
RXRBP28702 U3.40-201ENST00000408706 208 ntBASIC3.87□□□□□ -1.79
RXRBP28702 HMGN2P30-201ENST00000423237 256 ntBASIC3.87□□□□□ -1.79
RXRBP28702 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.87□□□□□ -1.79
RXRBP28702 AC074290.1-201ENST00000448883 135 ntBASIC3.87□□□□□ -1.79
RXRBP28702 RPS27AP10-201ENST00000496103 208 ntBASIC3.87□□□□□ -1.79
RXRBP28702 RNA5SP445-201ENST00000515889 115 ntBASIC3.87□□□□□ -1.79
RXRBP28702 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.87□□□□□ -1.79
RXRBP28702 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.87□□□□□ -1.79
RXRBP28702 AC013791.1-201ENST00000616619 62 ntBASIC3.87□□□□□ -1.79
RXRBP28702 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.87□□□□□ -1.79
RXRBP28702 AL391516.1-201ENST00000554380 2449 ntBASIC3.86□□□□□ -1.79
RXRBP28702 RNU6-727P-201ENST00000363592 107 ntBASIC3.86□□□□□ -1.79
RXRBP28702 MIR493-201ENST00000385254 89 ntBASIC3.86□□□□□ -1.79
RXRBP28702 RNA5SP425-201ENST00000410336 112 ntBASIC3.86□□□□□ -1.79
RXRBP28702 PTGES3P4-201ENST00000426243 356 ntBASIC3.86□□□□□ -1.79
RXRBP28702 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms