Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.38□□□□□ -2.03
TNFSF4P23510 RPL26P26-201ENST00000480251 434 ntBASIC2.38□□□□□ -2.03
TNFSF4P23510 AL049873.1-201ENST00000480540 376 ntBASIC2.38□□□□□ -2.03
TNFSF4P23510 AC025647.1-201ENST00000517879 253 ntBASIC2.38□□□□□ -2.03
TNFSF4P23510 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.38□□□□□ -2.03
TNFSF4P23510 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.38□□□□□ -2.03
TNFSF4P23510 AC016925.2-201ENST00000605108 242 ntBASIC2.38□□□□□ -2.03
TNFSF4P23510 Y_RNA.772-201ENST00000606692 102 ntBASIC2.38□□□□□ -2.03
TNFSF4P23510 AL353149.1-201ENST00000610667 244 ntBASIC2.38□□□□□ -2.03
TNFSF4P23510 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.38□□□□□ -2.03
TNFSF4P23510 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
TNFSF4P23510 AC092593.1-201ENST00000515413 1815 ntBASIC2.38□□□□□ -2.03
TNFSF4P23510 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.37□□□□□ -2.03
TNFSF4P23510 Y_RNA.158-201ENST00000363651 101 ntBASIC2.37□□□□□ -2.03
TNFSF4P23510 RNU1-51P-201ENST00000365345 176 ntBASIC2.37□□□□□ -2.03
TNFSF4P23510 MIR597-201ENST00000384968 97 ntBASIC2.37□□□□□ -2.03
TNFSF4P23510 AC060773.1-201ENST00000421698 310 ntBASIC2.37□□□□□ -2.03
TNFSF4P23510 AC105272.1-201ENST00000438604 198 ntBASIC2.37□□□□□ -2.03
TNFSF4P23510 AC011406.1-201ENST00000512440 370 ntBASIC2.37□□□□□ -2.03
TNFSF4P23510 AC004486.1-201ENST00000546846 233 ntBASIC2.37□□□□□ -2.03
TNFSF4P23510 U1.36-201ENST00000620684 176 ntBASIC2.37□□□□□ -2.03
TNFSF4P23510 AC006001.4-201ENST00000622243 395 ntBASIC2.37□□□□□ -2.03
TNFSF4P23510 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
TNFSF4P23510 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
TNFSF4P23510 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.36□□□□□ -2.03
TNFSF4P23510 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.36□□□□□ -2.03
TNFSF4P23510 SNORA63-201ENST00000363450 132 ntBASIC2.36□□□□□ -2.03
TNFSF4P23510 Y_RNA.216-201ENST00000364205 93 ntBASIC2.36□□□□□ -2.03
TNFSF4P23510 RNU6-1240P-201ENST00000365155 104 ntBASIC2.36□□□□□ -2.03
TNFSF4P23510 SNORA33.2-201ENST00000365413 134 ntBASIC2.36□□□□□ -2.03
TNFSF4P23510 RNU6-101P-201ENST00000410323 104 ntBASIC2.36□□□□□ -2.03
TNFSF4P23510 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.36□□□□□ -2.03
TNFSF4P23510 AL135938.1-201ENST00000443141 297 ntBASIC2.36□□□□□ -2.03
TNFSF4P23510 U8.20-201ENST00000459445 131 ntBASIC2.36□□□□□ -2.03
TNFSF4P23510 SNORA31.15-201ENST00000516771 132 ntBASIC2.36□□□□□ -2.03
TNFSF4P23510 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.36□□□□□ -2.03
TNFSF4P23510 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.36□□□□□ -2.03
TNFSF4P23510 AC124312.5-201ENST00000604451 268 ntBASIC2.36□□□□□ -2.03
TNFSF4P23510 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
TNFSF4P23510 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.35□□□□□ -2.03
TNFSF4P23510 AC131280.1-202ENST00000624067 4211 ntBASIC2.35□□□□□ -2.03
TNFSF4P23510 AC008555.8-201ENST00000623602 2168 ntBASIC2.35□□□□□ -2.03
TNFSF4P23510 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
TNFSF4P23510 XGY1-201ENST00000381172 446 ntBASIC2.35□□□□□ -2.03
TNFSF4P23510 Y_RNA.551-201ENST00000384661 102 ntBASIC2.35□□□□□ -2.03
TNFSF4P23510 MIR181B1-201ENST00000385240 110 ntBASIC2.35□□□□□ -2.03
TNFSF4P23510 Y_RNA.645-201ENST00000391229 102 ntBASIC2.35□□□□□ -2.03
TNFSF4P23510 AL138827.1-201ENST00000402666 306 ntBASIC2.35□□□□□ -2.03
TNFSF4P23510 MIR1253-201ENST00000408273 105 ntBASIC2.35□□□□□ -2.03
TNFSF4P23510 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.35□□□□□ -2.03
TNFSF4P23510 MIR3670-2-201ENST00000582974 65 ntBASIC2.35□□□□□ -2.03
TNFSF4P23510 MIR3670-1-201ENST00000584160 65 ntBASIC2.35□□□□□ -2.03
TNFSF4P23510 MIR3670-3-201ENST00000584855 65 ntBASIC2.35□□□□□ -2.03
TNFSF4P23510 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.35□□□□□ -2.03
TNFSF4P23510 U2.15-201ENST00000611544 191 ntBASIC2.35□□□□□ -2.03
TNFSF4P23510 MIR3670-4-201ENST00000612260 65 ntBASIC2.35□□□□□ -2.03
TNFSF4P23510 U2.16-201ENST00000613119 191 ntBASIC2.35□□□□□ -2.03
TNFSF4P23510 U2.12-201ENST00000613778 191 ntBASIC2.35□□□□□ -2.03
TNFSF4P23510 U2.20-201ENST00000613956 192 ntBASIC2.35□□□□□ -2.03
TNFSF4P23510 U2.9-201ENST00000615427 191 ntBASIC2.35□□□□□ -2.03
TNFSF4P23510 AC011476.5-201ENST00000615594 130 ntBASIC2.35□□□□□ -2.03
TNFSF4P23510 U2.11-201ENST00000616345 191 ntBASIC2.35□□□□□ -2.03
TNFSF4P23510 U2.2-201ENST00000616535 191 ntBASIC2.35□□□□□ -2.03
TNFSF4P23510 U2.3-201ENST00000617785 191 ntBASIC2.35□□□□□ -2.03
TNFSF4P23510 U2.19-201ENST00000618602 191 ntBASIC2.35□□□□□ -2.03
TNFSF4P23510 RNU2-1-201ENST00000618664 191 ntBASIC2.35□□□□□ -2.03
TNFSF4P23510 U2.6-201ENST00000619225 191 ntBASIC2.35□□□□□ -2.03
TNFSF4P23510 U2.5-201ENST00000619465 191 ntBASIC2.35□□□□□ -2.03
TNFSF4P23510 U2.10-201ENST00000620268 191 ntBASIC2.35□□□□□ -2.03
TNFSF4P23510 AC010297.1-201ENST00000623948 149 ntBASIC2.35□□□□□ -2.03
TNFSF4P23510 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.34□□□□□ -2.03
TNFSF4P23510 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.34□□□□□ -2.03
TNFSF4P23510 SNORA5B-201ENST00000363786 132 ntBASIC2.34□□□□□ -2.03
TNFSF4P23510 RNU6-961P-201ENST00000363893 105 ntBASIC2.34□□□□□ -2.03
TNFSF4P23510 Y_RNA.230-201ENST00000364348 109 ntBASIC2.34□□□□□ -2.03
TNFSF4P23510 SNORA72.2-201ENST00000365028 127 ntBASIC2.34□□□□□ -2.03
TNFSF4P23510 Y_RNA.389-201ENST00000383924 113 ntBASIC2.34□□□□□ -2.03
TNFSF4P23510 Y_RNA.422-201ENST00000384054 114 ntBASIC2.34□□□□□ -2.03
TNFSF4P23510 RNU6-639P-201ENST00000384074 107 ntBASIC2.34□□□□□ -2.03
TNFSF4P23510 Y_RNA.458-201ENST00000384240 102 ntBASIC2.34□□□□□ -2.03
TNFSF4P23510 Y_RNA.471-201ENST00000384312 102 ntBASIC2.34□□□□□ -2.03
TNFSF4P23510 MIR9-1-201ENST00000385198 89 ntBASIC2.34□□□□□ -2.03
TNFSF4P23510 MIR634-201ENST00000385208 97 ntBASIC2.34□□□□□ -2.03
TNFSF4P23510 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
TNFSF4P23510 SNORA11.4-201ENST00000408823 129 ntBASIC2.34□□□□□ -2.03
TNFSF4P23510 RNA5SP21-201ENST00000410917 96 ntBASIC2.34□□□□□ -2.03
TNFSF4P23510 AC016909.1-201ENST00000415916 166 ntBASIC2.34□□□□□ -2.03
TNFSF4P23510 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.34□□□□□ -2.03
TNFSF4P23510 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.34□□□□□ -2.03
TNFSF4P23510 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.34□□□□□ -2.03
TNFSF4P23510 RNU6-1041P-201ENST00000516254 102 ntBASIC2.34□□□□□ -2.03
TNFSF4P23510 AP003072.1-201ENST00000531740 145 ntBASIC2.34□□□□□ -2.03
TNFSF4P23510 EIF4BP1-201ENST00000554881 351 ntBASIC2.34□□□□□ -2.03
TNFSF4P23510 GTF3AP2-201ENST00000557014 266 ntBASIC2.34□□□□□ -2.03
TNFSF4P23510 AC005176.2-201ENST00000596933 147 ntBASIC2.34□□□□□ -2.03
TNFSF4P23510 AL049779.4-201ENST00000604500 156 ntBASIC2.34□□□□□ -2.03
TNFSF4P23510 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.34□□□□□ -2.03
TNFSF4P23510 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
TNFSF4P23510 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
TNFSF4P23510 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms