Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 RNU6-311P-201ENST00000516224 102 ntBASIC0.3□□□□□ -2.36
CCL1P22362 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
CCL1P22362 MIR5000-201ENST00000577717 103 ntBASIC0.3□□□□□ -2.36
CCL1P22362 FGF7P1-201ENST00000582820 288 ntBASIC0.3□□□□□ -2.36
CCL1P22362 MIR4452-201ENST00000583004 71 ntBASIC0.3□□□□□ -2.36
CCL1P22362 AC242498.1-201ENST00000604134 111 ntBASIC0.3□□□□□ -2.36
CCL1P22362 AL391903.3-201ENST00000612158 163 ntBASIC0.3□□□□□ -2.36
CCL1P22362 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
CCL1P22362 AC243994.1-201ENST00000618627 109 ntBASIC0.3□□□□□ -2.36
CCL1P22362 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
CCL1P22362 RNU6-1266P-201ENST00000362794 105 ntBASIC0.29□□□□□ -2.36
CCL1P22362 RNU6-424P-201ENST00000384367 105 ntBASIC0.29□□□□□ -2.36
CCL1P22362 RNU6-606P-201ENST00000384721 111 ntBASIC0.29□□□□□ -2.36
CCL1P22362 SNORD89-201ENST00000390981 114 ntBASIC0.29□□□□□ -2.36
CCL1P22362 SNORD99-201ENST00000408612 74 ntBASIC0.29□□□□□ -2.36
CCL1P22362 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.29□□□□□ -2.36
CCL1P22362 AL445305.1-201ENST00000432577 575 ntBASIC0.29□□□□□ -2.36
CCL1P22362 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC0.29□□□□□ -2.36
CCL1P22362 STAG3L5P-204ENST00000443759 179 ntBASIC0.29□□□□□ -2.36
CCL1P22362 NDUFB4P10-201ENST00000452541 359 ntBASIC0.29□□□□□ -2.36
CCL1P22362 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.29□□□□□ -2.36
CCL1P22362 U8.21-201ENST00000459536 136 ntBASIC0.29□□□□□ -2.36
CCL1P22362 RPS29P27-201ENST00000463711 170 ntBASIC0.29□□□□□ -2.36
CCL1P22362 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.29□□□□□ -2.36
CCL1P22362 MTND2P14-201ENST00000482139 351 ntBASIC0.29□□□□□ -2.36
CCL1P22362 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.29□□□□□ -2.36
CCL1P22362 RN7SKP12-201ENST00000516275 143 ntBASIC0.29□□□□□ -2.36
CCL1P22362 RNU7-28P-201ENST00000516759 62 ntBASIC0.29□□□□□ -2.36
CCL1P22362 MIR98-201ENST00000606724 119 ntBASIC0.29□□□□□ -2.36
CCL1P22362 SNORD11B-201ENST00000607707 90 ntBASIC0.29□□□□□ -2.36
CCL1P22362 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC0.29□□□□□ -2.36
CCL1P22362 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.29□□□□□ -2.36
CCL1P22362 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.29□□□□□ -2.36
CCL1P22362 SCARNA4-201ENST00000629045 128 ntBASIC0.29□□□□□ -2.36
CCL1P22362 SNORA50A-201ENST00000384225 134 ntBASIC0.28□□□□□ -2.36
CCL1P22362 RNU6-1237P-201ENST00000384777 107 ntBASIC0.28□□□□□ -2.36
CCL1P22362 MIR562-201ENST00000384894 95 ntBASIC0.28□□□□□ -2.36
CCL1P22362 SSR1P2-201ENST00000415208 787 ntBASIC0.28□□□□□ -2.36
CCL1P22362 Z99497.1-201ENST00000421282 135 ntBASIC0.28□□□□□ -2.36
CCL1P22362 AC009961.2-201ENST00000435771 251 ntBASIC0.28□□□□□ -2.36
CCL1P22362 AC004854.1-201ENST00000440356 349 ntBASIC0.28□□□□□ -2.36
CCL1P22362 AC093019.1-201ENST00000443135 252 ntBASIC0.28□□□□□ -2.36
CCL1P22362 Y_RNA.638-201ENST00000459374 113 ntBASIC0.28□□□□□ -2.36
CCL1P22362 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.28□□□□□ -2.36
CCL1P22362 RNU6-1110P-201ENST00000516462 101 ntBASIC0.28□□□□□ -2.36
CCL1P22362 RNU6-430P-201ENST00000517078 107 ntBASIC0.28□□□□□ -2.36
CCL1P22362 AC022868.1-201ENST00000517767 391 ntBASIC0.28□□□□□ -2.36
CCL1P22362 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.28□□□□□ -2.36
CCL1P22362 AC027419.1-201ENST00000522976 328 ntBASIC0.28□□□□□ -2.36
CCL1P22362 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.28□□□□□ -2.36
CCL1P22362 AL137161.1-201ENST00000532231 390 ntBASIC0.28□□□□□ -2.36
CCL1P22362 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.28□□□□□ -2.36
CCL1P22362 MTND1P8-201ENST00000571424 950 ntBASIC0.28□□□□□ -2.36
CCL1P22362 AC004223.2-201ENST00000590309 544 ntBASIC0.28□□□□□ -2.36
CCL1P22362 AL022161.1-201ENST00000604390 213 ntBASIC0.28□□□□□ -2.36
CCL1P22362 AL136317.1-201ENST00000612653 226 ntBASIC0.28□□□□□ -2.36
CCL1P22362 AC139792.3-201ENST00000623525 224 ntBASIC0.28□□□□□ -2.36
CCL1P22362 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
CCL1P22362 RNU6-1067P-201ENST00000384752 107 ntBASIC0.27□□□□□ -2.37
CCL1P22362 MTCO2P8-201ENST00000412213 658 ntBASIC0.27□□□□□ -2.37
CCL1P22362 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.27□□□□□ -2.37
CCL1P22362 TPT1P7-201ENST00000458300 517 ntBASIC0.27□□□□□ -2.37
CCL1P22362 MRPS36P4-201ENST00000534436 298 ntBASIC0.27□□□□□ -2.37
CCL1P22362 Z84480.1-201ENST00000605131 311 ntBASIC0.27□□□□□ -2.37
CCL1P22362 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.27□□□□□ -2.37
CCL1P22362 MIR6516-201ENST00000630554 81 ntBASIC0.27□□□□□ -2.37
CCL1P22362 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.26□□□□□ -2.37
CCL1P22362 Y_RNA.4-201ENST00000362333 112 ntBASIC0.26□□□□□ -2.37
CCL1P22362 Y_RNA.265-201ENST00000364677 108 ntBASIC0.26□□□□□ -2.37
CCL1P22362 RNU6-245P-201ENST00000384020 107 ntBASIC0.26□□□□□ -2.37
CCL1P22362 RNU6-793P-201ENST00000384233 104 ntBASIC0.26□□□□□ -2.37
CCL1P22362 RNA5SP504-201ENST00000410676 117 ntBASIC0.26□□□□□ -2.37
CCL1P22362 RPL23AP50-201ENST00000434149 455 ntBASIC0.26□□□□□ -2.37
CCL1P22362 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC0.26□□□□□ -2.37
CCL1P22362 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.26□□□□□ -2.37
CCL1P22362 RNA5SP54-201ENST00000516951 92 ntBASIC0.26□□□□□ -2.37
CCL1P22362 AC234772.3-201ENST00000602277 528 ntBASIC0.26□□□□□ -2.37
CCL1P22362 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.26□□□□□ -2.37
CCL1P22362 AC245014.2-201ENST00000603689 287 ntBASIC0.26□□□□□ -2.37
CCL1P22362 AC246785.4-201ENST00000605374 287 ntBASIC0.26□□□□□ -2.37
CCL1P22362 MIR6513-201ENST00000621188 64 ntBASIC0.26□□□□□ -2.37
CCL1P22362 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
CCL1P22362 SNORA25.9-201ENST00000365087 128 ntBASIC0.25□□□□□ -2.37
CCL1P22362 RNU6-1335P-201ENST00000365426 107 ntBASIC0.25□□□□□ -2.37
CCL1P22362 MIR1185-2-201ENST00000408687 86 ntBASIC0.25□□□□□ -2.37
CCL1P22362 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
CCL1P22362 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.25□□□□□ -2.37
CCL1P22362 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.25□□□□□ -2.37
CCL1P22362 RNU7-12P-201ENST00000516030 62 ntBASIC0.25□□□□□ -2.37
CCL1P22362 RNU6-496P-201ENST00000516145 99 ntBASIC0.25□□□□□ -2.37
CCL1P22362 SNORD111.1-201ENST00000516421 86 ntBASIC0.25□□□□□ -2.37
CCL1P22362 RNA5SP134-201ENST00000516492 96 ntBASIC0.25□□□□□ -2.37
CCL1P22362 RNU1-117P-201ENST00000517041 158 ntBASIC0.25□□□□□ -2.37
CCL1P22362 RNA5SP454-201ENST00000517231 127 ntBASIC0.25□□□□□ -2.37
CCL1P22362 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.25□□□□□ -2.37
CCL1P22362 AC243829.6-201ENST00000612652 106 ntBASIC0.25□□□□□ -2.37
CCL1P22362 AP001506.1-201ENST00000615444 211 ntBASIC0.25□□□□□ -2.37
CCL1P22362 AC243829.3-201ENST00000622177 108 ntBASIC0.25□□□□□ -2.37
CCL1P22362 AC010608.3-201ENST00000625048 527 ntBASIC0.25□□□□□ -2.37
CCL1P22362 AC090625.1-201ENST00000357130 210 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms