Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 SNORA72.4-201ENST00000384174 132 ntBASIC3.05□□□□□ -1.92
ATF4P18848 SNORA48.5-201ENST00000391143 135 ntBASIC3.05□□□□□ -1.92
ATF4P18848 RNU11-5P-201ENST00000391216 129 ntBASIC3.05□□□□□ -1.92
ATF4P18848 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.05□□□□□ -1.92
ATF4P18848 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.05□□□□□ -1.92
ATF4P18848 AL109933.2-201ENST00000452651 260 ntBASIC3.05□□□□□ -1.92
ATF4P18848 HMGN1P18-201ENST00000457642 277 ntBASIC3.05□□□□□ -1.92
ATF4P18848 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.05□□□□□ -1.92
ATF4P18848 RN7SL594P-201ENST00000470590 287 ntBASIC3.05□□□□□ -1.92
ATF4P18848 RPS29P21-201ENST00000496272 170 ntBASIC3.05□□□□□ -1.92
ATF4P18848 RNU6-1041P-201ENST00000516254 102 ntBASIC3.05□□□□□ -1.92
ATF4P18848 AC245166.1-201ENST00000521012 253 ntBASIC3.05□□□□□ -1.92
ATF4P18848 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.05□□□□□ -1.92
ATF4P18848 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.05□□□□□ -1.92
ATF4P18848 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.05□□□□□ -1.92
ATF4P18848 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
ATF4P18848 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.05□□□□□ -1.92
ATF4P18848 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.05□□□□□ -1.92
ATF4P18848 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
ATF4P18848 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.04□□□□□ -1.92
ATF4P18848 Y_RNA.29-201ENST00000362570 113 ntBASIC3.04□□□□□ -1.92
ATF4P18848 snoU2-30.2-201ENST00000362805 70 ntBASIC3.04□□□□□ -1.92
ATF4P18848 SNORD115-3-201ENST00000363100 82 ntBASIC3.04□□□□□ -1.92
ATF4P18848 Y_RNA.262-201ENST00000364641 102 ntBASIC3.04□□□□□ -1.92
ATF4P18848 Y_RNA.785-201ENST00000384290 109 ntBASIC3.04□□□□□ -1.92
ATF4P18848 RNU1-148P-201ENST00000384472 162 ntBASIC3.04□□□□□ -1.92
ATF4P18848 MIR181A2-201ENST00000384863 110 ntBASIC3.04□□□□□ -1.92
ATF4P18848 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.04□□□□□ -1.92
ATF4P18848 RN7SKP58-201ENST00000411010 305 ntBASIC3.04□□□□□ -1.92
ATF4P18848 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.04□□□□□ -1.92
ATF4P18848 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.04□□□□□ -1.92
ATF4P18848 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.04□□□□□ -1.92
ATF4P18848 RPS20P10-201ENST00000451209 253 ntBASIC3.04□□□□□ -1.92
ATF4P18848 ATP5J2P3-201ENST00000451550 258 ntBASIC3.04□□□□□ -1.92
ATF4P18848 Y_RNA.637-201ENST00000459424 114 ntBASIC3.04□□□□□ -1.92
ATF4P18848 Z83818.1-201ENST00000603584 150 ntBASIC3.04□□□□□ -1.92
ATF4P18848 AL008718.3-201ENST00000610217 321 ntBASIC3.04□□□□□ -1.92
ATF4P18848 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.04□□□□□ -1.92
ATF4P18848 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.04□□□□□ -1.92
ATF4P18848 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
ATF4P18848 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
ATF4P18848 AL356292.1-201ENST00000283110 373 ntBASIC3.03□□□□□ -1.92
ATF4P18848 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
ATF4P18848 MIR411-201ENST00000362239 96 ntBASIC3.03□□□□□ -1.92
ATF4P18848 RNU4-13P-201ENST00000364019 141 ntBASIC3.03□□□□□ -1.92
ATF4P18848 SNORD114-6-201ENST00000364393 72 ntBASIC3.03□□□□□ -1.92
ATF4P18848 Y_RNA.274-201ENST00000364714 101 ntBASIC3.03□□□□□ -1.92
ATF4P18848 U8.9-201ENST00000365667 134 ntBASIC3.03□□□□□ -1.92
ATF4P18848 MTCO2P33-201ENST00000402100 465 ntBASIC3.03□□□□□ -1.92
ATF4P18848 Y_RNA.793-201ENST00000411222 111 ntBASIC3.03□□□□□ -1.92
ATF4P18848 BMS1P22-201ENST00000414726 313 ntBASIC3.03□□□□□ -1.92
ATF4P18848 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.03□□□□□ -1.92
ATF4P18848 RPL36AP21-201ENST00000490372 323 ntBASIC3.03□□□□□ -1.92
ATF4P18848 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.03□□□□□ -1.92
ATF4P18848 RNU7-172P-201ENST00000517125 64 ntBASIC3.03□□□□□ -1.92
ATF4P18848 SNORA81.3-201ENST00000517283 198 ntBASIC3.03□□□□□ -1.92
ATF4P18848 MIR4658-201ENST00000584344 65 ntBASIC3.03□□□□□ -1.92
ATF4P18848 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
ATF4P18848 AL031274.2-201ENST00000599419 203 ntBASIC3.03□□□□□ -1.92
ATF4P18848 AC013791.1-201ENST00000616619 62 ntBASIC3.03□□□□□ -1.92
ATF4P18848 AC068647.2-201ENST00000637380 353 ntBASIC3.03□□□□□ -1.92
ATF4P18848 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.03□□□□□ -1.92
ATF4P18848 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
ATF4P18848 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
ATF4P18848 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
ATF4P18848 AC245060.5-201ENST00000610778 3293 ntBASIC3.02□□□□□ -1.93
ATF4P18848 RNU6-23P-201ENST00000363283 107 ntBASIC3.02□□□□□ -1.93
ATF4P18848 RNU6-417P-201ENST00000384712 107 ntBASIC3.02□□□□□ -1.93
ATF4P18848 SNORA26.5-201ENST00000391215 123 ntBASIC3.02□□□□□ -1.93
ATF4P18848 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.02□□□□□ -1.93
ATF4P18848 RNA5SP344-201ENST00000411081 104 ntBASIC3.02□□□□□ -1.93
ATF4P18848 AC093578.1-201ENST00000415219 368 ntBASIC3.02□□□□□ -1.93
ATF4P18848 RPS15AP28-201ENST00000435088 386 ntBASIC3.02□□□□□ -1.93
ATF4P18848 AL135790.2-201ENST00000437701 267 ntBASIC3.02□□□□□ -1.93
ATF4P18848 U8.19-201ENST00000459095 133 ntBASIC3.02□□□□□ -1.93
ATF4P18848 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.02□□□□□ -1.93
ATF4P18848 AC097462.1-201ENST00000514125 324 ntBASIC3.02□□□□□ -1.93
ATF4P18848 AC022080.3-201ENST00000544433 482 ntBASIC3.02□□□□□ -1.93
ATF4P18848 AC090877.1-201ENST00000561418 344 ntBASIC3.02□□□□□ -1.93
ATF4P18848 MIR5692C2-201ENST00000577959 77 ntBASIC3.02□□□□□ -1.93
ATF4P18848 RN7SL600P-201ENST00000581811 299 ntBASIC3.02□□□□□ -1.93
ATF4P18848 AC007229.1-201ENST00000590455 412 ntBASIC3.02□□□□□ -1.93
ATF4P18848 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.02□□□□□ -1.93
ATF4P18848 AC005972.2-201ENST00000604690 348 ntBASIC3.02□□□□□ -1.93
ATF4P18848 U6.73-201ENST00000619194 103 ntBASIC3.02□□□□□ -1.93
ATF4P18848 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
ATF4P18848 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
ATF4P18848 Y_RNA.304-201ENST00000365011 112 ntBASIC3.01□□□□□ -1.93
ATF4P18848 SNORA48.7-201ENST00000391302 135 ntBASIC3.01□□□□□ -1.93
ATF4P18848 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.01□□□□□ -1.93
ATF4P18848 AL117339.2-201ENST00000430475 180 ntBASIC3.01□□□□□ -1.93
ATF4P18848 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.01□□□□□ -1.93
ATF4P18848 Y_RNA.644-201ENST00000459006 113 ntBASIC3.01□□□□□ -1.93
ATF4P18848 AC106707.2-201ENST00000484182 374 ntBASIC3.01□□□□□ -1.93
ATF4P18848 Y_RNA.674-201ENST00000516362 113 ntBASIC3.01□□□□□ -1.93
ATF4P18848 RNA5SP137-201ENST00000516833 135 ntBASIC3.01□□□□□ -1.93
ATF4P18848 RNU7-116P-201ENST00000516940 62 ntBASIC3.01□□□□□ -1.93
ATF4P18848 AC104027.1-201ENST00000521887 300 ntBASIC3.01□□□□□ -1.93
ATF4P18848 AC024405.2-202ENST00000532731 184 ntBASIC3.01□□□□□ -1.93
ATF4P18848 MIR6867-201ENST00000610636 67 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms