Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 AC005668.1-201ENST00000571142 476 ntBASIC1.8□□□□□ -2.12
ERCC2P18074 AC069114.2-201ENST00000604699 304 ntBASIC1.8□□□□□ -2.12
ERCC2P18074 AC084768.2-201ENST00000622736 221 ntBASIC1.8□□□□□ -2.12
ERCC2P18074 AC068205.3-201ENST00000636385 468 ntBASIC1.8□□□□□ -2.12
ERCC2P18074 MTND4P12-201ENST00000498999 1377 ntBASIC1.8□□□□□ -2.12
ERCC2P18074 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
ERCC2P18074 RNU6-845P-201ENST00000362578 103 ntBASIC1.79□□□□□ -2.12
ERCC2P18074 RNU1-62P-201ENST00000362599 164 ntBASIC1.79□□□□□ -2.12
ERCC2P18074 SNORD48-201ENST00000364953 64 ntBASIC1.79□□□□□ -2.12
ERCC2P18074 Y_RNA.339-201ENST00000365325 102 ntBASIC1.79□□□□□ -2.12
ERCC2P18074 Y_RNA.490-201ENST00000384413 102 ntBASIC1.79□□□□□ -2.12
ERCC2P18074 FGF7P8-201ENST00000402994 292 ntBASIC1.79□□□□□ -2.12
ERCC2P18074 AC245047.4-201ENST00000433189 144 ntBASIC1.79□□□□□ -2.12
ERCC2P18074 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.79□□□□□ -2.12
ERCC2P18074 AP000870.1-201ENST00000472927 406 ntBASIC1.79□□□□□ -2.12
ERCC2P18074 AC134698.4-201ENST00000523451 826 ntBASIC1.79□□□□□ -2.12
ERCC2P18074 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.79□□□□□ -2.12
ERCC2P18074 AC104581.2-201ENST00000572227 430 ntBASIC1.79□□□□□ -2.12
ERCC2P18074 AL353149.1-201ENST00000610667 244 ntBASIC1.79□□□□□ -2.12
ERCC2P18074 AC006001.4-201ENST00000622243 395 ntBASIC1.79□□□□□ -2.12
ERCC2P18074 MIR338-201ENST00000636369 67 ntBASIC1.79□□□□□ -2.12
ERCC2P18074 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
ERCC2P18074 RNU6-727P-201ENST00000363592 107 ntBASIC1.78□□□□□ -2.12
ERCC2P18074 SNORD87-201ENST00000364849 89 ntBASIC1.78□□□□□ -2.12
ERCC2P18074 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
ERCC2P18074 Y_RNA.594-201ENST00000410373 140 ntBASIC1.78□□□□□ -2.12
ERCC2P18074 RPL37P10-201ENST00000412884 288 ntBASIC1.78□□□□□ -2.12
ERCC2P18074 RBMX2P4-201ENST00000441256 376 ntBASIC1.78□□□□□ -2.12
ERCC2P18074 HMGN2P23-201ENST00000456759 269 ntBASIC1.78□□□□□ -2.12
ERCC2P18074 AC103851.1-201ENST00000506833 274 ntBASIC1.78□□□□□ -2.12
ERCC2P18074 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.78□□□□□ -2.12
ERCC2P18074 MIR3618-201ENST00000580330 88 ntBASIC1.78□□□□□ -2.12
ERCC2P18074 AL355802.3-201ENST00000607571 545 ntBASIC1.78□□□□□ -2.12
ERCC2P18074 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.78□□□□□ -2.12
ERCC2P18074 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.77□□□□□ -2.13
ERCC2P18074 AC010615.1-201ENST00000594254 1764 ntBASIC1.77□□□□□ -2.13
ERCC2P18074 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.77□□□□□ -2.13
ERCC2P18074 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
ERCC2P18074 Y_RNA.2-201ENST00000362330 96 ntBASIC1.77□□□□□ -2.13
ERCC2P18074 RNU6-661P-201ENST00000362409 107 ntBASIC1.77□□□□□ -2.13
ERCC2P18074 RNU6-280P-201ENST00000364145 104 ntBASIC1.77□□□□□ -2.13
ERCC2P18074 RNU6-1019P-201ENST00000364424 107 ntBASIC1.77□□□□□ -2.13
ERCC2P18074 RNU6-593P-201ENST00000364716 112 ntBASIC1.77□□□□□ -2.13
ERCC2P18074 RNU6-601P-201ENST00000384540 107 ntBASIC1.77□□□□□ -2.13
ERCC2P18074 MIR548B-201ENST00000385247 97 ntBASIC1.77□□□□□ -2.13
ERCC2P18074 RNU6-1050P-201ENST00000410388 107 ntBASIC1.77□□□□□ -2.13
ERCC2P18074 PDCL2P1-201ENST00000419302 352 ntBASIC1.77□□□□□ -2.13
ERCC2P18074 USMG5P1-201ENST00000425964 177 ntBASIC1.77□□□□□ -2.13
ERCC2P18074 MTND3P23-201ENST00000431980 347 ntBASIC1.77□□□□□ -2.13
ERCC2P18074 Y_RNA.670-201ENST00000516255 105 ntBASIC1.77□□□□□ -2.13
ERCC2P18074 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.77□□□□□ -2.13
ERCC2P18074 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
ERCC2P18074 AC084364.2-201ENST00000546924 395 ntBASIC1.77□□□□□ -2.13
ERCC2P18074 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.77□□□□□ -2.13
ERCC2P18074 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.77□□□□□ -2.13
ERCC2P18074 AC012493.3-201ENST00000604494 112 ntBASIC1.77□□□□□ -2.13
ERCC2P18074 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.77□□□□□ -2.13
ERCC2P18074 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.77□□□□□ -2.13
ERCC2P18074 MIR7843-201ENST00000622274 79 ntBASIC1.77□□□□□ -2.13
ERCC2P18074 snoZ196.1-201ENST00000625269 89 ntBASIC1.77□□□□□ -2.13
ERCC2P18074 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
ERCC2P18074 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
ERCC2P18074 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.76□□□□□ -2.13
ERCC2P18074 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.76□□□□□ -2.13
ERCC2P18074 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
ERCC2P18074 snoU2-30.2-201ENST00000362805 70 ntBASIC1.76□□□□□ -2.13
ERCC2P18074 Y_RNA.88-201ENST00000363029 99 ntBASIC1.76□□□□□ -2.13
ERCC2P18074 Y_RNA.166-201ENST00000363730 102 ntBASIC1.76□□□□□ -2.13
ERCC2P18074 MIR520A-201ENST00000384862 85 ntBASIC1.76□□□□□ -2.13
ERCC2P18074 MIR10B-201ENST00000385011 110 ntBASIC1.76□□□□□ -2.13
ERCC2P18074 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.76□□□□□ -2.13
ERCC2P18074 AC007098.1-201ENST00000420122 367 ntBASIC1.76□□□□□ -2.13
ERCC2P18074 RPL31P63-201ENST00000422565 375 ntBASIC1.76□□□□□ -2.13
ERCC2P18074 CST2P1-201ENST00000425770 87 ntBASIC1.76□□□□□ -2.13
ERCC2P18074 AC007677.1-201ENST00000445757 515 ntBASIC1.76□□□□□ -2.13
ERCC2P18074 AC091179.3-201ENST00000474761 144 ntBASIC1.76□□□□□ -2.13
ERCC2P18074 PRDX4P1-201ENST00000507189 574 ntBASIC1.76□□□□□ -2.13
ERCC2P18074 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.76□□□□□ -2.13
ERCC2P18074 Y_RNA.706-201ENST00000516933 99 ntBASIC1.76□□□□□ -2.13
ERCC2P18074 RNU6-250P-201ENST00000516958 103 ntBASIC1.76□□□□□ -2.13
ERCC2P18074 RNA5SP437-201ENST00000517249 129 ntBASIC1.76□□□□□ -2.13
ERCC2P18074 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.76□□□□□ -2.13
ERCC2P18074 AC024614.2-201ENST00000577584 372 ntBASIC1.76□□□□□ -2.13
ERCC2P18074 AC100812.1-201ENST00000607622 580 ntBASIC1.76□□□□□ -2.13
ERCC2P18074 MIR8081-201ENST00000611533 95 ntBASIC1.76□□□□□ -2.13
ERCC2P18074 uc_338.5-201ENST00000611839 155 ntBASIC1.76□□□□□ -2.13
ERCC2P18074 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.76□□□□□ -2.13
ERCC2P18074 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
ERCC2P18074 RNU6-1283P-201ENST00000365314 105 ntBASIC1.75□□□□□ -2.13
ERCC2P18074 Y_RNA.390-201ENST00000383932 102 ntBASIC1.75□□□□□ -2.13
ERCC2P18074 Y_RNA.415-201ENST00000384012 112 ntBASIC1.75□□□□□ -2.13
ERCC2P18074 RNU6-793P-201ENST00000384233 104 ntBASIC1.75□□□□□ -2.13
ERCC2P18074 Y_RNA.482-201ENST00000384377 111 ntBASIC1.75□□□□□ -2.13
ERCC2P18074 MIR30A-201ENST00000385092 71 ntBASIC1.75□□□□□ -2.13
ERCC2P18074 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
ERCC2P18074 SNORA26.9-201ENST00000391322 122 ntBASIC1.75□□□□□ -2.13
ERCC2P18074 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
ERCC2P18074 RNU2-7P-201ENST00000410794 178 ntBASIC1.75□□□□□ -2.13
ERCC2P18074 AC016909.1-201ENST00000415916 166 ntBASIC1.75□□□□□ -2.13
ERCC2P18074 HMGN2P34-201ENST00000437647 269 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms