Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 RNU7-14P-201ENST00000459331 62 ntBASIC2.29□□□□□ -2.04
CTPS1P17812 RNU6-667P-201ENST00000517186 102 ntBASIC2.29□□□□□ -2.04
CTPS1P17812 AC022616.4-201ENST00000522985 181 ntBASIC2.29□□□□□ -2.04
CTPS1P17812 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.29□□□□□ -2.04
CTPS1P17812 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.29□□□□□ -2.04
CTPS1P17812 MIR5007-201ENST00000583098 95 ntBASIC2.29□□□□□ -2.04
CTPS1P17812 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.29□□□□□ -2.04
CTPS1P17812 AL162373.1-201ENST00000620433 407 ntBASIC2.29□□□□□ -2.04
CTPS1P17812 U6.92-201ENST00000636464 89 ntBASIC2.29□□□□□ -2.04
CTPS1P17812 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.29□□□□□ -2.04
CTPS1P17812 MTND5P35-201ENST00000557537 1720 ntBASIC2.28□□□□□ -2.04
CTPS1P17812 RNU6-727P-201ENST00000363592 107 ntBASIC2.28□□□□□ -2.04
CTPS1P17812 RNU6-450P-201ENST00000364654 107 ntBASIC2.28□□□□□ -2.04
CTPS1P17812 RNA5SP126-201ENST00000365092 109 ntBASIC2.28□□□□□ -2.04
CTPS1P17812 RNU6-1145P-201ENST00000384246 107 ntBASIC2.28□□□□□ -2.04
CTPS1P17812 AL033519.2-201ENST00000403958 392 ntBASIC2.28□□□□□ -2.04
CTPS1P17812 AL357139.1-201ENST00000407792 426 ntBASIC2.28□□□□□ -2.04
CTPS1P17812 Y_RNA.595-201ENST00000410403 105 ntBASIC2.28□□□□□ -2.04
CTPS1P17812 SNORD12B-201ENST00000410433 91 ntBASIC2.28□□□□□ -2.04
CTPS1P17812 RNU2-48P-201ENST00000410694 191 ntBASIC2.28□□□□□ -2.04
CTPS1P17812 AL118496.2-201ENST00000448300 230 ntBASIC2.28□□□□□ -2.04
CTPS1P17812 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.28□□□□□ -2.04
CTPS1P17812 ATP5EP1-201ENST00000510257 156 ntBASIC2.28□□□□□ -2.04
CTPS1P17812 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.28□□□□□ -2.04
CTPS1P17812 RNU1-117P-201ENST00000517041 158 ntBASIC2.28□□□□□ -2.04
CTPS1P17812 RNU6-1137P-201ENST00000517073 99 ntBASIC2.28□□□□□ -2.04
CTPS1P17812 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.28□□□□□ -2.04
CTPS1P17812 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.28□□□□□ -2.04
CTPS1P17812 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.28□□□□□ -2.04
CTPS1P17812 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.28□□□□□ -2.04
CTPS1P17812 AL390123.1-201ENST00000603216 237 ntBASIC2.28□□□□□ -2.04
CTPS1P17812 MZT1P2-201ENST00000604387 248 ntBASIC2.28□□□□□ -2.04
CTPS1P17812 AC124312.5-201ENST00000604451 268 ntBASIC2.28□□□□□ -2.04
CTPS1P17812 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.28□□□□□ -2.04
CTPS1P17812 MIR6766-201ENST00000622641 72 ntBASIC2.28□□□□□ -2.04
CTPS1P17812 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CTPS1P17812 RNU4-50P-201ENST00000364361 141 ntBASIC2.27□□□□□ -2.05
CTPS1P17812 Y_RNA.455-201ENST00000384230 98 ntBASIC2.27□□□□□ -2.05
CTPS1P17812 RNU6-611P-201ENST00000384276 104 ntBASIC2.27□□□□□ -2.05
CTPS1P17812 RNU6-301P-201ENST00000384277 107 ntBASIC2.27□□□□□ -2.05
CTPS1P17812 MIR144-201ENST00000384886 86 ntBASIC2.27□□□□□ -2.05
CTPS1P17812 MIR221-201ENST00000385135 110 ntBASIC2.27□□□□□ -2.05
CTPS1P17812 RNU6-823P-201ENST00000391042 103 ntBASIC2.27□□□□□ -2.05
CTPS1P17812 EDDM3CP-201ENST00000415977 425 ntBASIC2.27□□□□□ -2.05
CTPS1P17812 SDAD1P3-201ENST00000427380 333 ntBASIC2.27□□□□□ -2.05
CTPS1P17812 FCF1P4-201ENST00000448326 183 ntBASIC2.27□□□□□ -2.05
CTPS1P17812 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.27□□□□□ -2.05
CTPS1P17812 AC010469.2-201ENST00000496412 480 ntBASIC2.27□□□□□ -2.05
CTPS1P17812 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.27□□□□□ -2.05
CTPS1P17812 RNA5SP490-201ENST00000517141 136 ntBASIC2.27□□□□□ -2.05
CTPS1P17812 AC034114.1-201ENST00000520293 285 ntBASIC2.27□□□□□ -2.05
CTPS1P17812 AC091544.4-201ENST00000555268 342 ntBASIC2.27□□□□□ -2.05
CTPS1P17812 MIR3126-201ENST00000577443 74 ntBASIC2.27□□□□□ -2.05
CTPS1P17812 AL360085.1-201ENST00000604713 532 ntBASIC2.27□□□□□ -2.05
CTPS1P17812 AC022202.1-201ENST00000613515 211 ntBASIC2.27□□□□□ -2.05
CTPS1P17812 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.27□□□□□ -2.05
CTPS1P17812 AL590808.1-201ENST00000618696 141 ntBASIC2.27□□□□□ -2.05
CTPS1P17812 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.27□□□□□ -2.05
CTPS1P17812 MTND5P6-201ENST00000422338 1798 ntBASIC2.27□□□□□ -2.05
CTPS1P17812 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CTPS1P17812 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.27□□□□□ -2.05
CTPS1P17812 Y_RNA.162-201ENST00000363683 102 ntBASIC2.26□□□□□ -2.05
CTPS1P17812 SNORA63C-201ENST00000364578 129 ntBASIC2.26□□□□□ -2.05
CTPS1P17812 RNU6-926P-201ENST00000384075 107 ntBASIC2.26□□□□□ -2.05
CTPS1P17812 MIR524-201ENST00000385242 87 ntBASIC2.26□□□□□ -2.05
CTPS1P17812 RNU6-985P-201ENST00000410182 104 ntBASIC2.26□□□□□ -2.05
CTPS1P17812 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.26□□□□□ -2.05
CTPS1P17812 AC113618.1-201ENST00000416747 285 ntBASIC2.26□□□□□ -2.05
CTPS1P17812 Z98742.3-201ENST00000418637 326 ntBASIC2.26□□□□□ -2.05
CTPS1P17812 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.26□□□□□ -2.05
CTPS1P17812 UQCRBP2-201ENST00000447827 297 ntBASIC2.26□□□□□ -2.05
CTPS1P17812 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.26□□□□□ -2.05
CTPS1P17812 RNU6-991P-201ENST00000516168 107 ntBASIC2.26□□□□□ -2.05
CTPS1P17812 RNU6-764P-201ENST00000516396 105 ntBASIC2.26□□□□□ -2.05
CTPS1P17812 RNU6-1012P-201ENST00000516606 109 ntBASIC2.26□□□□□ -2.05
CTPS1P17812 IGLV3-17-201ENST00000519099 244 ntBASIC2.26□□□□□ -2.05
CTPS1P17812 CYCSP23-201ENST00000519781 313 ntBASIC2.26□□□□□ -2.05
CTPS1P17812 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.26□□□□□ -2.05
CTPS1P17812 RRN3P3-201ENST00000549207 578 ntBASIC2.26□□□□□ -2.05
CTPS1P17812 AC233702.2-202ENST00000562547 291 ntBASIC2.26□□□□□ -2.05
CTPS1P17812 AC009127.3-201ENST00000570531 403 ntBASIC2.26□□□□□ -2.05
CTPS1P17812 MIR5694-201ENST00000581190 76 ntBASIC2.26□□□□□ -2.05
CTPS1P17812 AC008873.1-201ENST00000625051 138 ntBASIC2.26□□□□□ -2.05
CTPS1P17812 AC068205.3-201ENST00000636385 468 ntBASIC2.26□□□□□ -2.05
CTPS1P17812 SNORD31B-201ENST00000364977 69 ntBASIC2.25□□□□□ -2.05
CTPS1P17812 SNORA63.7-201ENST00000365579 123 ntBASIC2.25□□□□□ -2.05
CTPS1P17812 Y_RNA.415-201ENST00000384012 112 ntBASIC2.25□□□□□ -2.05
CTPS1P17812 RNU6-738P-201ENST00000384531 106 ntBASIC2.25□□□□□ -2.05
CTPS1P17812 MIR300-201ENST00000401138 83 ntBASIC2.25□□□□□ -2.05
CTPS1P17812 SNORA3.2-201ENST00000408221 125 ntBASIC2.25□□□□□ -2.05
CTPS1P17812 RNA5SP504-201ENST00000410676 117 ntBASIC2.25□□□□□ -2.05
CTPS1P17812 RNA5SP270-201ENST00000411361 118 ntBASIC2.25□□□□□ -2.05
CTPS1P17812 HMGN2P18-201ENST00000450680 270 ntBASIC2.25□□□□□ -2.05
CTPS1P17812 SNORA40.9-201ENST00000515895 93 ntBASIC2.25□□□□□ -2.05
CTPS1P17812 RNU7-193P-201ENST00000516723 65 ntBASIC2.25□□□□□ -2.05
CTPS1P17812 Y_RNA.715-201ENST00000517082 110 ntBASIC2.25□□□□□ -2.05
CTPS1P17812 NDUFA5P6-201ENST00000542110 379 ntBASIC2.25□□□□□ -2.05
CTPS1P17812 PRELID2P1-201ENST00000552837 301 ntBASIC2.25□□□□□ -2.05
CTPS1P17812 AC113195.1-201ENST00000579952 141 ntBASIC2.25□□□□□ -2.05
CTPS1P17812 MIR4298-201ENST00000584380 73 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms