Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 MTND5P41-201ENST00000517498 206 ntBASIC2.85□□□□□ -1.95
COL11A2P13942 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.85□□□□□ -1.95
COL11A2P13942 AC233702.2-202ENST00000562547 291 ntBASIC2.85□□□□□ -1.95
COL11A2P13942 AC090897.2-201ENST00000581715 130 ntBASIC2.85□□□□□ -1.95
COL11A2P13942 MIR6766-201ENST00000622641 72 ntBASIC2.85□□□□□ -1.95
COL11A2P13942 AC091932.3-201ENST00000624223 323 ntBASIC2.85□□□□□ -1.95
COL11A2P13942 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.85□□□□□ -1.95
COL11A2P13942 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
COL11A2P13942 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.85□□□□□ -1.95
COL11A2P13942 AC002543.1-201ENST00000299783 1954 ntBASIC2.85□□□□□ -1.95
COL11A2P13942 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
COL11A2P13942 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.85□□□□□ -1.95
COL11A2P13942 Y_RNA.179-201ENST00000363844 90 ntBASIC2.85□□□□□ -1.95
COL11A2P13942 Y_RNA.262-201ENST00000364641 102 ntBASIC2.85□□□□□ -1.95
COL11A2P13942 Y_RNA.304-201ENST00000365011 112 ntBASIC2.85□□□□□ -1.95
COL11A2P13942 RNU6-959P-201ENST00000384671 107 ntBASIC2.85□□□□□ -1.95
COL11A2P13942 MIR493-201ENST00000385254 89 ntBASIC2.85□□□□□ -1.95
COL11A2P13942 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.85□□□□□ -1.95
COL11A2P13942 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.85□□□□□ -1.95
COL11A2P13942 ARF4P2-201ENST00000430209 526 ntBASIC2.85□□□□□ -1.95
COL11A2P13942 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.85□□□□□ -1.95
COL11A2P13942 UQCRBP2-201ENST00000447827 297 ntBASIC2.85□□□□□ -1.95
COL11A2P13942 RNU6-581P-201ENST00000516214 105 ntBASIC2.85□□□□□ -1.95
COL11A2P13942 RNU6-1073P-201ENST00000517182 106 ntBASIC2.85□□□□□ -1.95
COL11A2P13942 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.85□□□□□ -1.95
COL11A2P13942 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.85□□□□□ -1.95
COL11A2P13942 AC005176.2-201ENST00000596933 147 ntBASIC2.85□□□□□ -1.95
COL11A2P13942 AC006380.1-201ENST00000603598 186 ntBASIC2.85□□□□□ -1.95
COL11A2P13942 AC010999.1-201ENST00000611856 324 ntBASIC2.85□□□□□ -1.95
COL11A2P13942 SNORA43.4-201ENST00000629559 138 ntBASIC2.85□□□□□ -1.95
COL11A2P13942 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
COL11A2P13942 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.84□□□□□ -1.95
COL11A2P13942 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
COL11A2P13942 ZNF204P-201ENST00000416749 2397 ntBASIC2.84□□□□□ -1.95
COL11A2P13942 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
COL11A2P13942 AC092268.1-201ENST00000342691 405 ntBASIC2.84□□□□□ -1.96
COL11A2P13942 RNU1-91P-201ENST00000364746 163 ntBASIC2.84□□□□□ -1.96
COL11A2P13942 SNORA72.2-201ENST00000365028 127 ntBASIC2.84□□□□□ -1.96
COL11A2P13942 RNU6-245P-201ENST00000384020 107 ntBASIC2.84□□□□□ -1.96
COL11A2P13942 RNU6-1117P-201ENST00000384525 104 ntBASIC2.84□□□□□ -1.96
COL11A2P13942 SNORA80E-201ENST00000384744 137 ntBASIC2.84□□□□□ -1.96
COL11A2P13942 RNU6-1001P-201ENST00000411265 100 ntBASIC2.84□□□□□ -1.96
COL11A2P13942 NDUFS5P4-201ENST00000412983 318 ntBASIC2.84□□□□□ -1.96
COL11A2P13942 RPL26P27-201ENST00000414397 437 ntBASIC2.84□□□□□ -1.96
COL11A2P13942 AC244505.4-201ENST00000434905 287 ntBASIC2.84□□□□□ -1.96
COL11A2P13942 AC244670.1-201ENST00000436879 112 ntBASIC2.84□□□□□ -1.96
COL11A2P13942 SSXP5-201ENST00000443473 287 ntBASIC2.84□□□□□ -1.96
COL11A2P13942 RPL21P104-201ENST00000464143 478 ntBASIC2.84□□□□□ -1.96
COL11A2P13942 SNRPGP7-201ENST00000469016 106 ntBASIC2.84□□□□□ -1.96
COL11A2P13942 RPS27AP9-201ENST00000477681 438 ntBASIC2.84□□□□□ -1.96
COL11A2P13942 HSPE1P4-201ENST00000550617 308 ntBASIC2.84□□□□□ -1.96
COL11A2P13942 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.84□□□□□ -1.96
COL11A2P13942 AL109809.4-201ENST00000603520 2185 ntBASIC2.83□□□□□ -1.96
COL11A2P13942 SNORA25.1-201ENST00000362326 128 ntBASIC2.83□□□□□ -1.96
COL11A2P13942 Y_RNA.291-201ENST00000364886 113 ntBASIC2.83□□□□□ -1.96
COL11A2P13942 RNA5SP189-201ENST00000364920 115 ntBASIC2.83□□□□□ -1.96
COL11A2P13942 U3.15-201ENST00000365398 212 ntBASIC2.83□□□□□ -1.96
COL11A2P13942 RNU6-22P-201ENST00000384355 107 ntBASIC2.83□□□□□ -1.96
COL11A2P13942 RNA5SP475-201ENST00000410568 110 ntBASIC2.83□□□□□ -1.96
COL11A2P13942 ELOCP21-201ENST00000412558 336 ntBASIC2.83□□□□□ -1.96
COL11A2P13942 AL049830.2-201ENST00000480072 201 ntBASIC2.83□□□□□ -1.96
COL11A2P13942 RPS29P20-201ENST00000489592 171 ntBASIC2.83□□□□□ -1.96
COL11A2P13942 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.83□□□□□ -1.96
COL11A2P13942 RNU6-346P-201ENST00000516288 111 ntBASIC2.83□□□□□ -1.96
COL11A2P13942 RNU6-567P-201ENST00000516746 107 ntBASIC2.83□□□□□ -1.96
COL11A2P13942 SNORA31.23-201ENST00000517219 133 ntBASIC2.83□□□□□ -1.96
COL11A2P13942 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
COL11A2P13942 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.83□□□□□ -1.96
COL11A2P13942 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.83□□□□□ -1.96
COL11A2P13942 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.83□□□□□ -1.96
COL11A2P13942 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.83□□□□□ -1.96
COL11A2P13942 MIR6134-201ENST00000617606 109 ntBASIC2.83□□□□□ -1.96
COL11A2P13942 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
COL11A2P13942 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.83□□□□□ -1.96
COL11A2P13942 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
COL11A2P13942 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
COL11A2P13942 AC091564.4-201ENST00000533934 2194 ntBASIC2.83□□□□□ -1.96
COL11A2P13942 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
COL11A2P13942 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
COL11A2P13942 Y_RNA.4-201ENST00000362333 112 ntBASIC2.82□□□□□ -1.96
COL11A2P13942 RNU6-312P-201ENST00000364629 107 ntBASIC2.82□□□□□ -1.96
COL11A2P13942 RNU4-56P-201ENST00000364700 142 ntBASIC2.82□□□□□ -1.96
COL11A2P13942 Y_RNA.435-201ENST00000384095 112 ntBASIC2.82□□□□□ -1.96
COL11A2P13942 U8.13-201ENST00000390842 128 ntBASIC2.82□□□□□ -1.96
COL11A2P13942 SNORA46.1-201ENST00000391069 153 ntBASIC2.82□□□□□ -1.96
COL11A2P13942 RNU6-1248P-201ENST00000391096 64 ntBASIC2.82□□□□□ -1.96
COL11A2P13942 RNA5SP129-201ENST00000410276 118 ntBASIC2.82□□□□□ -1.96
COL11A2P13942 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
COL11A2P13942 RPL23AP3-201ENST00000453844 468 ntBASIC2.82□□□□□ -1.96
COL11A2P13942 RN7SL499P-201ENST00000481141 276 ntBASIC2.82□□□□□ -1.96
COL11A2P13942 CKS1BP2-201ENST00000497342 240 ntBASIC2.82□□□□□ -1.96
COL11A2P13942 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.82□□□□□ -1.96
COL11A2P13942 MIR5007-201ENST00000583098 95 ntBASIC2.82□□□□□ -1.96
COL11A2P13942 AC104465.1-201ENST00000611365 139 ntBASIC2.82□□□□□ -1.96
COL11A2P13942 snoU18.1-201ENST00000629629 71 ntBASIC2.82□□□□□ -1.96
COL11A2P13942 U6.98-201ENST00000637157 84 ntBASIC2.82□□□□□ -1.96
COL11A2P13942 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.82□□□□□ -1.96
COL11A2P13942 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
COL11A2P13942 CUL1P1-201ENST00000509510 2425 ntBASIC2.82□□□□□ -1.96
COL11A2P13942 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms