Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.11□□□□□ -2.07
HLA-DOBP13765 U4atac.1-201ENST00000618345 95 ntBASIC2.11□□□□□ -2.07
HLA-DOBP13765 AC130454.1-201ENST00000622948 401 ntBASIC2.11□□□□□ -2.07
HLA-DOBP13765 AC008873.1-201ENST00000625051 138 ntBASIC2.11□□□□□ -2.07
HLA-DOBP13765 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.11□□□□□ -2.07
HLA-DOBP13765 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
HLA-DOBP13765 RNU6-727P-201ENST00000363592 107 ntBASIC2.1□□□□□ -2.07
HLA-DOBP13765 Y_RNA.214-201ENST00000364201 112 ntBASIC2.1□□□□□ -2.07
HLA-DOBP13765 Y_RNA.574-201ENST00000384766 95 ntBASIC2.1□□□□□ -2.07
HLA-DOBP13765 MIR300-201ENST00000401138 83 ntBASIC2.1□□□□□ -2.07
HLA-DOBP13765 AL079342.1-201ENST00000401460 267 ntBASIC2.1□□□□□ -2.07
HLA-DOBP13765 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.1□□□□□ -2.07
HLA-DOBP13765 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.1□□□□□ -2.07
HLA-DOBP13765 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.1□□□□□ -2.07
HLA-DOBP13765 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.1□□□□□ -2.07
HLA-DOBP13765 AL731563.1-201ENST00000442202 214 ntBASIC2.1□□□□□ -2.07
HLA-DOBP13765 AC234781.5-201ENST00000508429 271 ntBASIC2.1□□□□□ -2.07
HLA-DOBP13765 MIR449C-201ENST00000516047 92 ntBASIC2.1□□□□□ -2.07
HLA-DOBP13765 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.1□□□□□ -2.07
HLA-DOBP13765 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.1□□□□□ -2.07
HLA-DOBP13765 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.1□□□□□ -2.07
HLA-DOBP13765 AL137847.3-201ENST00000611521 109 ntBASIC2.1□□□□□ -2.07
HLA-DOBP13765 AL357075.2-201ENST00000614906 189 ntBASIC2.1□□□□□ -2.07
HLA-DOBP13765 AC011476.5-201ENST00000615594 130 ntBASIC2.1□□□□□ -2.07
HLA-DOBP13765 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.1□□□□□ -2.07
HLA-DOBP13765 AC016717.2-201ENST00000609089 5141 ntBASIC2.1□□□□□ -2.07
HLA-DOBP13765 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.07
HLA-DOBP13765 Y_RNA.47-201ENST00000362697 108 ntBASIC2.09□□□□□ -2.07
HLA-DOBP13765 Y_RNA.144-201ENST00000363521 113 ntBASIC2.09□□□□□ -2.07
HLA-DOBP13765 RNU6-770P-201ENST00000363929 105 ntBASIC2.09□□□□□ -2.07
HLA-DOBP13765 Y_RNA.415-201ENST00000384012 112 ntBASIC2.09□□□□□ -2.07
HLA-DOBP13765 Y_RNA.462-201ENST00000384268 102 ntBASIC2.09□□□□□ -2.07
HLA-DOBP13765 RNU6-1026P-201ENST00000384465 108 ntBASIC2.09□□□□□ -2.07
HLA-DOBP13765 MIR586-201ENST00000385035 97 ntBASIC2.09□□□□□ -2.07
HLA-DOBP13765 MIR1302-3-201ENST00000408128 138 ntBASIC2.09□□□□□ -2.07
HLA-DOBP13765 HMGN2P35-201ENST00000412164 270 ntBASIC2.09□□□□□ -2.07
HLA-DOBP13765 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.09□□□□□ -2.07
HLA-DOBP13765 ELOCP20-201ENST00000422460 345 ntBASIC2.09□□□□□ -2.07
HLA-DOBP13765 RPS15AP28-201ENST00000435088 386 ntBASIC2.09□□□□□ -2.07
HLA-DOBP13765 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.09□□□□□ -2.07
HLA-DOBP13765 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.09□□□□□ -2.07
HLA-DOBP13765 RNU7-14P-201ENST00000459331 62 ntBASIC2.09□□□□□ -2.07
HLA-DOBP13765 RN7SL636P-201ENST00000497504 294 ntBASIC2.09□□□□□ -2.07
HLA-DOBP13765 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.09□□□□□ -2.07
HLA-DOBP13765 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.09□□□□□ -2.07
HLA-DOBP13765 RNU6-408P-201ENST00000515910 100 ntBASIC2.09□□□□□ -2.07
HLA-DOBP13765 RNU6-965P-201ENST00000516721 96 ntBASIC2.09□□□□□ -2.07
HLA-DOBP13765 RRN3P3-201ENST00000549207 578 ntBASIC2.09□□□□□ -2.07
HLA-DOBP13765 AC018448.1-201ENST00000552843 316 ntBASIC2.09□□□□□ -2.07
HLA-DOBP13765 RPL12P50-201ENST00000603116 116 ntBASIC2.09□□□□□ -2.07
HLA-DOBP13765 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
HLA-DOBP13765 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.09□□□□□ -2.08
HLA-DOBP13765 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.08□□□□□ -2.08
HLA-DOBP13765 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
HLA-DOBP13765 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.08□□□□□ -2.08
HLA-DOBP13765 RNA5SP289-201ENST00000362332 137 ntBASIC2.08□□□□□ -2.08
HLA-DOBP13765 RNA5SP393-201ENST00000363423 117 ntBASIC2.08□□□□□ -2.08
HLA-DOBP13765 Y_RNA.230-201ENST00000364348 109 ntBASIC2.08□□□□□ -2.08
HLA-DOBP13765 SNORD114-30-201ENST00000364448 72 ntBASIC2.08□□□□□ -2.08
HLA-DOBP13765 SNORA67.2-201ENST00000384300 149 ntBASIC2.08□□□□□ -2.08
HLA-DOBP13765 RNU6-713P-201ENST00000384761 107 ntBASIC2.08□□□□□ -2.08
HLA-DOBP13765 AL357139.1-201ENST00000407792 426 ntBASIC2.08□□□□□ -2.08
HLA-DOBP13765 RNA5SP504-201ENST00000410676 117 ntBASIC2.08□□□□□ -2.08
HLA-DOBP13765 ELOCP21-201ENST00000412558 336 ntBASIC2.08□□□□□ -2.08
HLA-DOBP13765 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.08□□□□□ -2.08
HLA-DOBP13765 AL513328.1-201ENST00000446460 224 ntBASIC2.08□□□□□ -2.08
HLA-DOBP13765 NDUFB4P10-201ENST00000452541 359 ntBASIC2.08□□□□□ -2.08
HLA-DOBP13765 RNU6-625P-201ENST00000459412 107 ntBASIC2.08□□□□□ -2.08
HLA-DOBP13765 AC025465.3-201ENST00000510570 311 ntBASIC2.08□□□□□ -2.08
HLA-DOBP13765 RNY3P15-201ENST00000516297 97 ntBASIC2.08□□□□□ -2.08
HLA-DOBP13765 RNU1-117P-201ENST00000517041 158 ntBASIC2.08□□□□□ -2.08
HLA-DOBP13765 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.08□□□□□ -2.08
HLA-DOBP13765 AK6P2-201ENST00000549020 471 ntBASIC2.08□□□□□ -2.08
HLA-DOBP13765 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.08□□□□□ -2.08
HLA-DOBP13765 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.08□□□□□ -2.08
HLA-DOBP13765 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.08□□□□□ -2.08
HLA-DOBP13765 MIR4672-201ENST00000583126 81 ntBASIC2.08□□□□□ -2.08
HLA-DOBP13765 CTSLP2-204ENST00000629029 392 ntBASIC2.08□□□□□ -2.08
HLA-DOBP13765 MIR1248-201ENST00000629190 106 ntBASIC2.08□□□□□ -2.08
HLA-DOBP13765 LINC02555-201ENST00000563933 1951 ntBASIC2.08□□□□□ -2.08
HLA-DOBP13765 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
HLA-DOBP13765 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
HLA-DOBP13765 MIR410-201ENST00000362222 80 ntBASIC2.07□□□□□ -2.08
HLA-DOBP13765 Y_RNA.19-201ENST00000362462 99 ntBASIC2.07□□□□□ -2.08
HLA-DOBP13765 U3.8-201ENST00000363675 217 ntBASIC2.07□□□□□ -2.08
HLA-DOBP13765 RNU6-961P-201ENST00000363893 105 ntBASIC2.07□□□□□ -2.08
HLA-DOBP13765 SNORD31B-201ENST00000364977 69 ntBASIC2.07□□□□□ -2.08
HLA-DOBP13765 RNU6-1264P-201ENST00000383891 107 ntBASIC2.07□□□□□ -2.08
HLA-DOBP13765 SNORD63-201ENST00000384262 68 ntBASIC2.07□□□□□ -2.08
HLA-DOBP13765 RNU6-196P-201ENST00000384315 107 ntBASIC2.07□□□□□ -2.08
HLA-DOBP13765 RNU6-463P-201ENST00000384340 107 ntBASIC2.07□□□□□ -2.08
HLA-DOBP13765 Y_RNA.498-201ENST00000384460 102 ntBASIC2.07□□□□□ -2.08
HLA-DOBP13765 MIR1283-1-201ENST00000408494 87 ntBASIC2.07□□□□□ -2.08
HLA-DOBP13765 RNU5A-5P-201ENST00000411054 116 ntBASIC2.07□□□□□ -2.08
HLA-DOBP13765 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.07□□□□□ -2.08
HLA-DOBP13765 AC005002.2-201ENST00000438228 269 ntBASIC2.07□□□□□ -2.08
HLA-DOBP13765 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.07□□□□□ -2.08
HLA-DOBP13765 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.07□□□□□ -2.08
HLA-DOBP13765 ATP5EP1-201ENST00000510257 156 ntBASIC2.07□□□□□ -2.08
HLA-DOBP13765 RNA5SP402-201ENST00000517148 110 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms