Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 SNRPGP3-201ENST00000469405 227 ntBASIC3.76□□□□□ -1.81
HOXD8P13378 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.76□□□□□ -1.81
HOXD8P13378 RNU7-115P-201ENST00000516433 55 ntBASIC3.76□□□□□ -1.81
HOXD8P13378 AC008739.2-201ENST00000597006 317 ntBASIC3.76□□□□□ -1.81
HOXD8P13378 RPL17P51-201ENST00000605218 238 ntBASIC3.76□□□□□ -1.81
HOXD8P13378 AC022149.2-201ENST00000621061 203 ntBASIC3.76□□□□□ -1.81
HOXD8P13378 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
HOXD8P13378 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
HOXD8P13378 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
HOXD8P13378 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
HOXD8P13378 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HOXD8P13378 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
HOXD8P13378 AP002088.1-201ENST00000382740 395 ntBASIC3.75□□□□□ -1.81
HOXD8P13378 MIR873-201ENST00000401120 77 ntBASIC3.75□□□□□ -1.81
HOXD8P13378 RNU6-1064P-201ENST00000410626 104 ntBASIC3.75□□□□□ -1.81
HOXD8P13378 CYCSP49-201ENST00000420810 319 ntBASIC3.75□□□□□ -1.81
HOXD8P13378 RNU7-107P-201ENST00000459121 61 ntBASIC3.75□□□□□ -1.81
HOXD8P13378 RPL23AP54-201ENST00000495129 419 ntBASIC3.75□□□□□ -1.81
HOXD8P13378 RNU6-659P-201ENST00000516454 104 ntBASIC3.75□□□□□ -1.81
HOXD8P13378 AP001340.1-201ENST00000624405 217 ntBASIC3.75□□□□□ -1.81
HOXD8P13378 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HOXD8P13378 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HOXD8P13378 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.75□□□□□ -1.81
HOXD8P13378 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.75□□□□□ -1.81
HOXD8P13378 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HOXD8P13378 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.75□□□□□ -1.81
HOXD8P13378 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HOXD8P13378 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.74□□□□□ -1.81
HOXD8P13378 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HOXD8P13378 SNORA63.4-201ENST00000362763 126 ntBASIC3.74□□□□□ -1.81
HOXD8P13378 Y_RNA.361-201ENST00000365515 120 ntBASIC3.74□□□□□ -1.81
HOXD8P13378 MIR1185-2-201ENST00000408687 86 ntBASIC3.74□□□□□ -1.81
HOXD8P13378 RN7SKP284-201ENST00000411002 343 ntBASIC3.74□□□□□ -1.81
HOXD8P13378 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.74□□□□□ -1.81
HOXD8P13378 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.74□□□□□ -1.81
HOXD8P13378 AL357552.1-201ENST00000445254 415 ntBASIC3.74□□□□□ -1.81
HOXD8P13378 RPL23AP7-203ENST00000449021 469 ntBASIC3.74□□□□□ -1.81
HOXD8P13378 AC080013.2-201ENST00000460866 323 ntBASIC3.74□□□□□ -1.81
HOXD8P13378 CENPBD1P1-201ENST00000464061 469 ntBASIC3.74□□□□□ -1.81
HOXD8P13378 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.74□□□□□ -1.81
HOXD8P13378 RNU6-1337P-201ENST00000516525 95 ntBASIC3.74□□□□□ -1.81
HOXD8P13378 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.74□□□□□ -1.81
HOXD8P13378 AC027419.1-201ENST00000522976 328 ntBASIC3.74□□□□□ -1.81
HOXD8P13378 AC090049.2-201ENST00000550377 109 ntBASIC3.74□□□□□ -1.81
HOXD8P13378 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.74□□□□□ -1.81
HOXD8P13378 Y_RNA.757-201ENST00000578934 114 ntBASIC3.74□□□□□ -1.81
HOXD8P13378 MIR4753-201ENST00000585119 83 ntBASIC3.74□□□□□ -1.81
HOXD8P13378 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.74□□□□□ -1.81
HOXD8P13378 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
HOXD8P13378 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
HOXD8P13378 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HOXD8P13378 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HOXD8P13378 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.74□□□□□ -1.81
HOXD8P13378 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HOXD8P13378 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HOXD8P13378 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HOXD8P13378 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
HOXD8P13378 RNU6-271P-201ENST00000363858 105 ntBASIC3.73□□□□□ -1.81
HOXD8P13378 SNORA51.4-201ENST00000364993 124 ntBASIC3.73□□□□□ -1.81
HOXD8P13378 RNY3P5-201ENST00000384127 102 ntBASIC3.73□□□□□ -1.81
HOXD8P13378 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.73□□□□□ -1.81
HOXD8P13378 AL353705.1-201ENST00000433468 480 ntBASIC3.73□□□□□ -1.81
HOXD8P13378 AL357134.1-201ENST00000445848 426 ntBASIC3.73□□□□□ -1.81
HOXD8P13378 HSPE1P13-201ENST00000451143 297 ntBASIC3.73□□□□□ -1.81
HOXD8P13378 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.73□□□□□ -1.81
HOXD8P13378 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.73□□□□□ -1.81
HOXD8P13378 MTND5P34-201ENST00000568888 325 ntBASIC3.73□□□□□ -1.81
HOXD8P13378 POLR3GP1-201ENST00000594073 261 ntBASIC3.73□□□□□ -1.81
HOXD8P13378 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.73□□□□□ -1.81
HOXD8P13378 AC006111.3-201ENST00000622137 383 ntBASIC3.73□□□□□ -1.81
HOXD8P13378 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HOXD8P13378 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.72□□□□□ -1.81
HOXD8P13378 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
HOXD8P13378 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.72□□□□□ -1.81
HOXD8P13378 MIR423-201ENST00000362201 94 ntBASIC3.72□□□□□ -1.81
HOXD8P13378 SNORD45.3-201ENST00000363836 72 ntBASIC3.72□□□□□ -1.81
HOXD8P13378 RNU4-41P-201ENST00000364426 143 ntBASIC3.72□□□□□ -1.81
HOXD8P13378 SNORD14D-201ENST00000384390 87 ntBASIC3.72□□□□□ -1.81
HOXD8P13378 MIR767-201ENST00000390228 109 ntBASIC3.72□□□□□ -1.81
HOXD8P13378 Y_RNA.584-201ENST00000391090 114 ntBASIC3.72□□□□□ -1.81
HOXD8P13378 AL138878.1-201ENST00000405131 347 ntBASIC3.72□□□□□ -1.81
HOXD8P13378 Z98941.1-201ENST00000407764 100 ntBASIC3.72□□□□□ -1.81
HOXD8P13378 RNA5SP38-201ENST00000410750 119 ntBASIC3.72□□□□□ -1.81
HOXD8P13378 Z98742.2-201ENST00000431564 187 ntBASIC3.72□□□□□ -1.81
HOXD8P13378 AL121890.1-201ENST00000435457 205 ntBASIC3.72□□□□□ -1.81
HOXD8P13378 S100A11P2-201ENST00000467589 312 ntBASIC3.72□□□□□ -1.81
HOXD8P13378 HMGN2P9-201ENST00000476875 229 ntBASIC3.72□□□□□ -1.81
HOXD8P13378 RNU6-1098P-201ENST00000516772 96 ntBASIC3.72□□□□□ -1.81
HOXD8P13378 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.72□□□□□ -1.81
HOXD8P13378 AC079598.5-201ENST00000547460 117 ntBASIC3.72□□□□□ -1.81
HOXD8P13378 EIF4BP1-201ENST00000554881 351 ntBASIC3.72□□□□□ -1.81
HOXD8P13378 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.72□□□□□ -1.81
HOXD8P13378 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
HOXD8P13378 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HOXD8P13378 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HOXD8P13378 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HOXD8P13378 AC007256.1-201ENST00000392253 2765 ntBASIC3.72□□□□□ -1.81
HOXD8P13378 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
HOXD8P13378 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HOXD8P13378 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms