Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.23□□□□□ -2.05
PCNAP12004 AC016717.2-201ENST00000609089 5141 ntBASIC2.23□□□□□ -2.05
PCNAP12004 AC005592.1-201ENST00000566527 1640 ntBASIC2.23□□□□□ -2.05
PCNAP12004 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
PCNAP12004 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
PCNAP12004 RNU6-1305P-201ENST00000364353 104 ntBASIC2.22□□□□□ -2.05
PCNAP12004 RNU6-450P-201ENST00000364654 107 ntBASIC2.22□□□□□ -2.05
PCNAP12004 SNORD31B-201ENST00000364977 69 ntBASIC2.22□□□□□ -2.05
PCNAP12004 RNU6-438P-201ENST00000365561 103 ntBASIC2.22□□□□□ -2.05
PCNAP12004 SNORA67.2-201ENST00000384300 149 ntBASIC2.22□□□□□ -2.05
PCNAP12004 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
PCNAP12004 SNORD12B-201ENST00000410433 91 ntBASIC2.22□□□□□ -2.05
PCNAP12004 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.22□□□□□ -2.05
PCNAP12004 HMGN2P9-201ENST00000476875 229 ntBASIC2.22□□□□□ -2.05
PCNAP12004 Y_RNA.683-201ENST00000516508 93 ntBASIC2.22□□□□□ -2.05
PCNAP12004 RNU6-344P-201ENST00000516635 111 ntBASIC2.22□□□□□ -2.05
PCNAP12004 RNU6-1137P-201ENST00000517073 99 ntBASIC2.22□□□□□ -2.05
PCNAP12004 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.22□□□□□ -2.05
PCNAP12004 MIR3162-201ENST00000581818 82 ntBASIC2.22□□□□□ -2.05
PCNAP12004 RPL17P51-201ENST00000605218 238 ntBASIC2.22□□□□□ -2.05
PCNAP12004 SNORD11B-201ENST00000607707 90 ntBASIC2.22□□□□□ -2.05
PCNAP12004 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.22□□□□□ -2.05
PCNAP12004 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.22□□□□□ -2.05
PCNAP12004 AC091932.3-201ENST00000624223 323 ntBASIC2.22□□□□□ -2.05
PCNAP12004 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.22□□□□□ -2.05
PCNAP12004 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
PCNAP12004 RNU1-62P-201ENST00000362599 164 ntBASIC2.21□□□□□ -2.06
PCNAP12004 Y_RNA.326-201ENST00000365176 113 ntBASIC2.21□□□□□ -2.06
PCNAP12004 RNU6-1145P-201ENST00000384246 107 ntBASIC2.21□□□□□ -2.06
PCNAP12004 MRPL42P3-201ENST00000401492 326 ntBASIC2.21□□□□□ -2.06
PCNAP12004 MIR1283-1-201ENST00000408494 87 ntBASIC2.21□□□□□ -2.06
PCNAP12004 EDDM3CP-201ENST00000415977 425 ntBASIC2.21□□□□□ -2.06
PCNAP12004 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.21□□□□□ -2.06
PCNAP12004 AC016717.1-201ENST00000448918 286 ntBASIC2.21□□□□□ -2.06
PCNAP12004 AC112492.4-201ENST00000456549 352 ntBASIC2.21□□□□□ -2.06
PCNAP12004 RN7SKP49-201ENST00000516675 260 ntBASIC2.21□□□□□ -2.06
PCNAP12004 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.21□□□□□ -2.06
PCNAP12004 MIR3126-201ENST00000577443 74 ntBASIC2.21□□□□□ -2.06
PCNAP12004 SCARNA15.3-201ENST00000626315 122 ntBASIC2.21□□□□□ -2.06
PCNAP12004 SCARNA4.1-201ENST00000628597 123 ntBASIC2.21□□□□□ -2.06
PCNAP12004 AC243829.7-201ENST00000633081 225 ntBASIC2.21□□□□□ -2.06
PCNAP12004 U6.92-201ENST00000636464 89 ntBASIC2.21□□□□□ -2.06
PCNAP12004 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
PCNAP12004 MIR340-201ENST00000362125 95 ntBASIC2.2□□□□□ -2.06
PCNAP12004 RNU6-418P-201ENST00000384035 107 ntBASIC2.2□□□□□ -2.06
PCNAP12004 RNU4-52P-201ENST00000384209 138 ntBASIC2.2□□□□□ -2.06
PCNAP12004 AL137159.1-201ENST00000452808 512 ntBASIC2.2□□□□□ -2.06
PCNAP12004 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.2□□□□□ -2.06
PCNAP12004 AC016925.1-201ENST00000458303 298 ntBASIC2.2□□□□□ -2.06
PCNAP12004 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.2□□□□□ -2.06
PCNAP12004 RNU6-911P-201ENST00000516523 104 ntBASIC2.2□□□□□ -2.06
PCNAP12004 RNU7-193P-201ENST00000516723 65 ntBASIC2.2□□□□□ -2.06
PCNAP12004 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.2□□□□□ -2.06
PCNAP12004 AL031274.2-201ENST00000599419 203 ntBASIC2.2□□□□□ -2.06
PCNAP12004 AC104695.3-201ENST00000604052 296 ntBASIC2.2□□□□□ -2.06
PCNAP12004 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.2□□□□□ -2.06
PCNAP12004 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.2□□□□□ -2.06
PCNAP12004 MIR6766-201ENST00000622641 72 ntBASIC2.2□□□□□ -2.06
PCNAP12004 AC068205.3-201ENST00000636385 468 ntBASIC2.2□□□□□ -2.06
PCNAP12004 AC099654.10-201ENST00000640395 161 ntBASIC2.2□□□□□ -2.06
PCNAP12004 AC008555.8-201ENST00000623602 2168 ntBASIC2.2□□□□□ -2.06
PCNAP12004 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
PCNAP12004 RNA5SP289-201ENST00000362332 137 ntBASIC2.19□□□□□ -2.06
PCNAP12004 Y_RNA.202-201ENST00000364083 110 ntBASIC2.19□□□□□ -2.06
PCNAP12004 Y_RNA.332-201ENST00000365271 113 ntBASIC2.19□□□□□ -2.06
PCNAP12004 SNORA33.2-201ENST00000365413 134 ntBASIC2.19□□□□□ -2.06
PCNAP12004 RNY3P4-201ENST00000384428 101 ntBASIC2.19□□□□□ -2.06
PCNAP12004 Y_RNA.510-201ENST00000384511 114 ntBASIC2.19□□□□□ -2.06
PCNAP12004 Y_RNA.595-201ENST00000410403 105 ntBASIC2.19□□□□□ -2.06
PCNAP12004 RNA5SP270-201ENST00000411361 118 ntBASIC2.19□□□□□ -2.06
PCNAP12004 AC139712.2-201ENST00000424302 339 ntBASIC2.19□□□□□ -2.06
PCNAP12004 UQCRBP2-201ENST00000447827 297 ntBASIC2.19□□□□□ -2.06
PCNAP12004 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.19□□□□□ -2.06
PCNAP12004 AC007395.1-201ENST00000451333 677 ntBASIC2.19□□□□□ -2.06
PCNAP12004 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.19□□□□□ -2.06
PCNAP12004 SNORA40.9-201ENST00000515895 93 ntBASIC2.19□□□□□ -2.06
PCNAP12004 RNA5SP281-201ENST00000516504 135 ntBASIC2.19□□□□□ -2.06
PCNAP12004 SNORA40.14-201ENST00000516543 86 ntBASIC2.19□□□□□ -2.06
PCNAP12004 RNU6-107P-201ENST00000516643 102 ntBASIC2.19□□□□□ -2.06
PCNAP12004 MIR2355-201ENST00000517199 87 ntBASIC2.19□□□□□ -2.06
PCNAP12004 AC091144.1-201ENST00000519573 138 ntBASIC2.19□□□□□ -2.06
PCNAP12004 AC040926.1-201ENST00000530195 238 ntBASIC2.19□□□□□ -2.06
PCNAP12004 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.19□□□□□ -2.06
PCNAP12004 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.19□□□□□ -2.06
PCNAP12004 MIR4753-201ENST00000585119 83 ntBASIC2.19□□□□□ -2.06
PCNAP12004 AL162373.1-201ENST00000620433 407 ntBASIC2.19□□□□□ -2.06
PCNAP12004 CENPCP1-201ENST00000533085 2578 ntBASIC2.19□□□□□ -2.06
PCNAP12004 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
PCNAP12004 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
PCNAP12004 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.18□□□□□ -2.06
PCNAP12004 SNORA63-201ENST00000363450 132 ntBASIC2.18□□□□□ -2.06
PCNAP12004 SNORD114-6-201ENST00000364393 72 ntBASIC2.18□□□□□ -2.06
PCNAP12004 XGY1-201ENST00000381172 446 ntBASIC2.18□□□□□ -2.06
PCNAP12004 SNORD14D-201ENST00000384390 87 ntBASIC2.18□□□□□ -2.06
PCNAP12004 Y_RNA.527-201ENST00000384573 102 ntBASIC2.18□□□□□ -2.06
PCNAP12004 MIR586-201ENST00000385035 97 ntBASIC2.18□□□□□ -2.06
PCNAP12004 MIR548B-201ENST00000385247 97 ntBASIC2.18□□□□□ -2.06
PCNAP12004 SRIP3-201ENST00000413200 219 ntBASIC2.18□□□□□ -2.06
PCNAP12004 AC010531.2-201ENST00000465012 153 ntBASIC2.18□□□□□ -2.06
PCNAP12004 GNAI2P1-201ENST00000541815 315 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms