Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 U2.11-201ENST00000616345 191 ntBASIC2.55□□□□□ -2
PF4V1P10720 U2.2-201ENST00000616535 191 ntBASIC2.55□□□□□ -2
PF4V1P10720 U2.3-201ENST00000617785 191 ntBASIC2.55□□□□□ -2
PF4V1P10720 U2.19-201ENST00000618602 191 ntBASIC2.55□□□□□ -2
PF4V1P10720 RNU2-1-201ENST00000618664 191 ntBASIC2.55□□□□□ -2
PF4V1P10720 U2.6-201ENST00000619225 191 ntBASIC2.55□□□□□ -2
PF4V1P10720 U2.5-201ENST00000619465 191 ntBASIC2.55□□□□□ -2
PF4V1P10720 U2.10-201ENST00000620268 191 ntBASIC2.55□□□□□ -2
PF4V1P10720 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.55□□□□□ -2
PF4V1P10720 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PF4V1P10720 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.54□□□□□ -2
PF4V1P10720 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.54□□□□□ -2
PF4V1P10720 RNU1-70P-201ENST00000362618 164 ntBASIC2.54□□□□□ -2
PF4V1P10720 Y_RNA.243-201ENST00000364481 109 ntBASIC2.54□□□□□ -2
PF4V1P10720 Y_RNA.446-201ENST00000384178 104 ntBASIC2.54□□□□□ -2
PF4V1P10720 RNU11-3P-201ENST00000391111 133 ntBASIC2.54□□□□□ -2
PF4V1P10720 SNORD23.1-201ENST00000408212 104 ntBASIC2.54□□□□□ -2
PF4V1P10720 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.54□□□□□ -2
PF4V1P10720 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.54□□□□□ -2
PF4V1P10720 AC011753.1-201ENST00000451001 220 ntBASIC2.54□□□□□ -2
PF4V1P10720 HMGN1P18-201ENST00000457642 277 ntBASIC2.54□□□□□ -2
PF4V1P10720 AC010401.1-201ENST00000463867 348 ntBASIC2.54□□□□□ -2
PF4V1P10720 AL049873.1-201ENST00000480540 376 ntBASIC2.54□□□□□ -2
PF4V1P10720 AC010598.1-201ENST00000510378 103 ntBASIC2.54□□□□□ -2
PF4V1P10720 RNY3P15-201ENST00000516297 97 ntBASIC2.54□□□□□ -2
PF4V1P10720 RNU7-110P-201ENST00000516891 62 ntBASIC2.54□□□□□ -2
PF4V1P10720 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.54□□□□□ -2
PF4V1P10720 AC022080.3-201ENST00000544433 482 ntBASIC2.54□□□□□ -2
PF4V1P10720 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.54□□□□□ -2
PF4V1P10720 AC008749.1-201ENST00000597650 306 ntBASIC2.54□□□□□ -2
PF4V1P10720 AC005828.6-201ENST00000606610 232 ntBASIC2.54□□□□□ -2
PF4V1P10720 U6.115-201ENST00000636045 103 ntBASIC2.54□□□□□ -2
PF4V1P10720 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.53□□□□□ -2
PF4V1P10720 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
PF4V1P10720 Y_RNA.19-201ENST00000362462 99 ntBASIC2.53□□□□□ -2
PF4V1P10720 snoU2-30.2-201ENST00000362805 70 ntBASIC2.53□□□□□ -2
PF4V1P10720 RNU6-21P-201ENST00000384710 107 ntBASIC2.53□□□□□ -2
PF4V1P10720 RNU6-1109P-201ENST00000391187 107 ntBASIC2.53□□□□□ -2
PF4V1P10720 COTL1P1-201ENST00000422309 375 ntBASIC2.53□□□□□ -2
PF4V1P10720 AC022018.1-201ENST00000430685 241 ntBASIC2.53□□□□□ -2
PF4V1P10720 SNORD65B-201ENST00000459126 73 ntBASIC2.53□□□□□ -2
PF4V1P10720 RN7SL863P-201ENST00000462370 296 ntBASIC2.53□□□□□ -2
PF4V1P10720 SEPT14P8-201ENST00000508026 178 ntBASIC2.53□□□□□ -2
PF4V1P10720 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.53□□□□□ -2
PF4V1P10720 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.53□□□□□ -2
PF4V1P10720 HMGB3P3-201ENST00000510526 400 ntBASIC2.53□□□□□ -2
PF4V1P10720 RNU6-1041P-201ENST00000516254 102 ntBASIC2.53□□□□□ -2
PF4V1P10720 RNU6-155P-201ENST00000516347 100 ntBASIC2.53□□□□□ -2
PF4V1P10720 AC006023.1-201ENST00000603944 259 ntBASIC2.53□□□□□ -2
PF4V1P10720 SNORD113-5-201ENST00000607261 78 ntBASIC2.53□□□□□ -2
PF4V1P10720 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.53□□□□□ -2
PF4V1P10720 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.53□□□□□ -2
PF4V1P10720 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
PF4V1P10720 SNORD114-7-201ENST00000362520 77 ntBASIC2.52□□□□□ -2.01
PF4V1P10720 RNA5SP383-201ENST00000362934 120 ntBASIC2.52□□□□□ -2.01
PF4V1P10720 Y_RNA.331-201ENST00000365267 102 ntBASIC2.52□□□□□ -2.01
PF4V1P10720 SNORA11.2-201ENST00000408318 127 ntBASIC2.52□□□□□ -2.01
PF4V1P10720 RNU2-20P-201ENST00000410425 191 ntBASIC2.52□□□□□ -2.01
PF4V1P10720 AL358176.2-201ENST00000425769 204 ntBASIC2.52□□□□□ -2.01
PF4V1P10720 HMGN2P3-201ENST00000433603 273 ntBASIC2.52□□□□□ -2.01
PF4V1P10720 AC244505.4-201ENST00000434905 287 ntBASIC2.52□□□□□ -2.01
PF4V1P10720 HMGN2P5-201ENST00000436882 273 ntBASIC2.52□□□□□ -2.01
PF4V1P10720 MTND2P29-201ENST00000438595 412 ntBASIC2.52□□□□□ -2.01
PF4V1P10720 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.52□□□□□ -2.01
PF4V1P10720 SSXP5-201ENST00000443473 287 ntBASIC2.52□□□□□ -2.01
PF4V1P10720 LINC01399-202ENST00000458450 244 ntBASIC2.52□□□□□ -2.01
PF4V1P10720 SNORA59A-201ENST00000459326 152 ntBASIC2.52□□□□□ -2.01
PF4V1P10720 MTATP8P1-201ENST00000467115 207 ntBASIC2.52□□□□□ -2.01
PF4V1P10720 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.52□□□□□ -2.01
PF4V1P10720 RNA5SP367-201ENST00000516557 118 ntBASIC2.52□□□□□ -2.01
PF4V1P10720 RNU6-635P-201ENST00000516651 102 ntBASIC2.52□□□□□ -2.01
PF4V1P10720 RNU2-19P-201ENST00000517288 84 ntBASIC2.52□□□□□ -2.01
PF4V1P10720 AP005660.1-201ENST00000522972 293 ntBASIC2.52□□□□□ -2.01
PF4V1P10720 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.52□□□□□ -2.01
PF4V1P10720 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.52□□□□□ -2.01
PF4V1P10720 AC006386.2-201ENST00000624491 75 ntBASIC2.52□□□□□ -2.01
PF4V1P10720 AC012005.1-201ENST00000624575 75 ntBASIC2.52□□□□□ -2.01
PF4V1P10720 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
PF4V1P10720 RNU6-271P-201ENST00000363858 105 ntBASIC2.51□□□□□ -2.01
PF4V1P10720 SNORD115-30-201ENST00000364117 82 ntBASIC2.51□□□□□ -2.01
PF4V1P10720 MIR597-201ENST00000384968 97 ntBASIC2.51□□□□□ -2.01
PF4V1P10720 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
PF4V1P10720 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.51□□□□□ -2.01
PF4V1P10720 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
PF4V1P10720 HMGN2P34-201ENST00000437647 269 ntBASIC2.51□□□□□ -2.01
PF4V1P10720 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.51□□□□□ -2.01
PF4V1P10720 LARP7P3-201ENST00000579888 337 ntBASIC2.51□□□□□ -2.01
PF4V1P10720 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.51□□□□□ -2.01
PF4V1P10720 MIR203B-201ENST00000636080 86 ntBASIC2.51□□□□□ -2.01
PF4V1P10720 AC092593.1-201ENST00000515413 1815 ntBASIC2.51□□□□□ -2.01
PF4V1P10720 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.51□□□□□ -2.01
PF4V1P10720 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
PF4V1P10720 SNORD113-8-201ENST00000363497 74 ntBASIC2.5□□□□□ -2.01
PF4V1P10720 Y_RNA.176-201ENST00000363815 109 ntBASIC2.5□□□□□ -2.01
PF4V1P10720 AP002088.1-201ENST00000382740 395 ntBASIC2.5□□□□□ -2.01
PF4V1P10720 SNORA20B-201ENST00000384220 132 ntBASIC2.5□□□□□ -2.01
PF4V1P10720 RNU6-713P-201ENST00000384761 107 ntBASIC2.5□□□□□ -2.01
PF4V1P10720 RNU6-1105P-201ENST00000384774 107 ntBASIC2.5□□□□□ -2.01
PF4V1P10720 MIR515-2-201ENST00000384883 83 ntBASIC2.5□□□□□ -2.01
PF4V1P10720 MIR515-1-201ENST00000384884 83 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms