Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 RNA5SP201-201ENST00000410316 124 ntBASIC4.38□□□□□ -1.71
CSB-PGBD3P0DP91 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC4.38□□□□□ -1.71
CSB-PGBD3P0DP91 AC016925.1-201ENST00000458303 298 ntBASIC4.38□□□□□ -1.71
CSB-PGBD3P0DP91 AC103975.1-201ENST00000482506 483 ntBASIC4.38□□□□□ -1.71
CSB-PGBD3P0DP91 CYCSP26-201ENST00000534107 320 ntBASIC4.38□□□□□ -1.71
CSB-PGBD3P0DP91 MIR3613-201ENST00000579844 87 ntBASIC4.38□□□□□ -1.71
CSB-PGBD3P0DP91 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC4.38□□□□□ -1.71
CSB-PGBD3P0DP91 AC006380.1-201ENST00000603598 186 ntBASIC4.38□□□□□ -1.71
CSB-PGBD3P0DP91 SNRPGP20-201ENST00000604477 205 ntBASIC4.38□□□□□ -1.71
CSB-PGBD3P0DP91 PCGEM1.1-201ENST00000613431 131 ntBASIC4.38□□□□□ -1.71
CSB-PGBD3P0DP91 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CSB-PGBD3P0DP91 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC4.38□□□□□ -1.71
CSB-PGBD3P0DP91 ZNF702P-202ENST00000434269 1966 ntBASIC4.38□□□□□ -1.71
CSB-PGBD3P0DP91 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.38□□□□□ -1.71
CSB-PGBD3P0DP91 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CSB-PGBD3P0DP91 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CSB-PGBD3P0DP91 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.37□□□□□ -1.71
CSB-PGBD3P0DP91 RNU1-101P-201ENST00000391171 127 ntBASIC4.37□□□□□ -1.71
CSB-PGBD3P0DP91 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC4.37□□□□□ -1.71
CSB-PGBD3P0DP91 AL357552.1-201ENST00000445254 415 ntBASIC4.37□□□□□ -1.71
CSB-PGBD3P0DP91 RPS3P1-201ENST00000456781 192 ntBASIC4.37□□□□□ -1.71
CSB-PGBD3P0DP91 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC4.37□□□□□ -1.71
CSB-PGBD3P0DP91 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC4.37□□□□□ -1.71
CSB-PGBD3P0DP91 RAC1P5-201ENST00000512182 576 ntBASIC4.37□□□□□ -1.71
CSB-PGBD3P0DP91 MIR2114-201ENST00000516645 80 ntBASIC4.37□□□□□ -1.71
CSB-PGBD3P0DP91 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC4.37□□□□□ -1.71
CSB-PGBD3P0DP91 AL360157.1-201ENST00000565962 87 ntBASIC4.37□□□□□ -1.71
CSB-PGBD3P0DP91 MIR4644-201ENST00000579929 84 ntBASIC4.37□□□□□ -1.71
CSB-PGBD3P0DP91 AL670379.2-201ENST00000604983 252 ntBASIC4.37□□□□□ -1.71
CSB-PGBD3P0DP91 AC093732.2-201ENST00000607950 274 ntBASIC4.37□□□□□ -1.71
CSB-PGBD3P0DP91 RNVU1-4-201ENST00000612985 164 ntBASIC4.37□□□□□ -1.71
CSB-PGBD3P0DP91 AC018692.3-201ENST00000623929 123 ntBASIC4.37□□□□□ -1.71
CSB-PGBD3P0DP91 U6.98-201ENST00000637157 84 ntBASIC4.37□□□□□ -1.71
CSB-PGBD3P0DP91 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CSB-PGBD3P0DP91 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CSB-PGBD3P0DP91 MAPK10-322ENST00000641485 4530 ntBASIC4.36□□□□□ -1.71
CSB-PGBD3P0DP91 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.36□□□□□ -1.71
CSB-PGBD3P0DP91 Y_RNA.415-201ENST00000384012 112 ntBASIC4.36□□□□□ -1.71
CSB-PGBD3P0DP91 RNU6-476P-201ENST00000384726 107 ntBASIC4.36□□□□□ -1.71
CSB-PGBD3P0DP91 AC097463.2-201ENST00000421074 142 ntBASIC4.36□□□□□ -1.71
CSB-PGBD3P0DP91 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC4.36□□□□□ -1.71
CSB-PGBD3P0DP91 AC245047.8-201ENST00000456455 284 ntBASIC4.36□□□□□ -1.71
CSB-PGBD3P0DP91 AC145146.1-201ENST00000496370 254 ntBASIC4.36□□□□□ -1.71
CSB-PGBD3P0DP91 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC4.36□□□□□ -1.71
CSB-PGBD3P0DP91 SNORA70.19-201ENST00000516717 90 ntBASIC4.36□□□□□ -1.71
CSB-PGBD3P0DP91 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.36□□□□□ -1.71
CSB-PGBD3P0DP91 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC4.36□□□□□ -1.71
CSB-PGBD3P0DP91 MIR3124-201ENST00000582636 67 ntBASIC4.36□□□□□ -1.71
CSB-PGBD3P0DP91 AC110741.2-201ENST00000605278 268 ntBASIC4.36□□□□□ -1.71
CSB-PGBD3P0DP91 XIST_intron.1-201ENST00000619444 68 ntBASIC4.36□□□□□ -1.71
CSB-PGBD3P0DP91 UCA1.1-201ENST00000620952 75 ntBASIC4.36□□□□□ -1.71
CSB-PGBD3P0DP91 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.36□□□□□ -1.71
CSB-PGBD3P0DP91 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.36□□□□□ -1.71
CSB-PGBD3P0DP91 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.36□□□□□ -1.71
CSB-PGBD3P0DP91 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CSB-PGBD3P0DP91 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CSB-PGBD3P0DP91 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CSB-PGBD3P0DP91 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CSB-PGBD3P0DP91 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CSB-PGBD3P0DP91 Y_RNA.287-201ENST00000364853 94 ntBASIC4.35□□□□□ -1.71
CSB-PGBD3P0DP91 RNU6-969P-201ENST00000383900 105 ntBASIC4.35□□□□□ -1.71
CSB-PGBD3P0DP91 SNORA72.4-201ENST00000384174 132 ntBASIC4.35□□□□□ -1.71
CSB-PGBD3P0DP91 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.35□□□□□ -1.71
CSB-PGBD3P0DP91 RNU6-561P-201ENST00000516222 102 ntBASIC4.35□□□□□ -1.71
CSB-PGBD3P0DP91 RNU2-56P-201ENST00000516826 190 ntBASIC4.35□□□□□ -1.71
CSB-PGBD3P0DP91 Y_RNA.709-201ENST00000516952 92 ntBASIC4.35□□□□□ -1.71
CSB-PGBD3P0DP91 EIF4A1P12-201ENST00000551910 141 ntBASIC4.35□□□□□ -1.71
CSB-PGBD3P0DP91 MIR4679-2-201ENST00000578358 77 ntBASIC4.35□□□□□ -1.71
CSB-PGBD3P0DP91 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC4.35□□□□□ -1.71
CSB-PGBD3P0DP91 AL513302.2-201ENST00000562313 1842 ntBASIC4.35□□□□□ -1.71
CSB-PGBD3P0DP91 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CSB-PGBD3P0DP91 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CSB-PGBD3P0DP91 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC4.34□□□□□ -1.71
CSB-PGBD3P0DP91 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CSB-PGBD3P0DP91 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
CSB-PGBD3P0DP91 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CSB-PGBD3P0DP91 snoU2_19.1-201ENST00000362361 80 ntBASIC4.34□□□□□ -1.71
CSB-PGBD3P0DP91 RNU1-62P-201ENST00000362599 164 ntBASIC4.34□□□□□ -1.71
CSB-PGBD3P0DP91 U3.9-201ENST00000363823 204 ntBASIC4.34□□□□□ -1.71
CSB-PGBD3P0DP91 RNU6-283P-201ENST00000364788 107 ntBASIC4.34□□□□□ -1.71
CSB-PGBD3P0DP91 RNU6-1144P-201ENST00000384247 104 ntBASIC4.34□□□□□ -1.71
CSB-PGBD3P0DP91 MIR616-201ENST00000385293 97 ntBASIC4.34□□□□□ -1.71
CSB-PGBD3P0DP91 MT-TT-201ENST00000387460 66 ntBASIC4.34□□□□□ -1.71
CSB-PGBD3P0DP91 HMGN2P8-201ENST00000391458 268 ntBASIC4.34□□□□□ -1.71
CSB-PGBD3P0DP91 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC4.34□□□□□ -1.71
CSB-PGBD3P0DP91 AC107083.1-201ENST00000439643 279 ntBASIC4.34□□□□□ -1.71
CSB-PGBD3P0DP91 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.34□□□□□ -1.71
CSB-PGBD3P0DP91 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC4.34□□□□□ -1.71
CSB-PGBD3P0DP91 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC4.34□□□□□ -1.71
CSB-PGBD3P0DP91 RNA5SP76-201ENST00000516277 87 ntBASIC4.34□□□□□ -1.71
CSB-PGBD3P0DP91 SNORA72.7-201ENST00000516349 94 ntBASIC4.34□□□□□ -1.71
CSB-PGBD3P0DP91 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.34□□□□□ -1.71
CSB-PGBD3P0DP91 MIR4765-201ENST00000585007 77 ntBASIC4.34□□□□□ -1.71
CSB-PGBD3P0DP91 AC006023.1-201ENST00000603944 259 ntBASIC4.34□□□□□ -1.71
CSB-PGBD3P0DP91 AC002064.3-201ENST00000623448 346 ntBASIC4.34□□□□□ -1.71
CSB-PGBD3P0DP91 MTND5P32-201ENST00000560711 1802 ntBASIC4.34□□□□□ -1.71
CSB-PGBD3P0DP91 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.34□□□□□ -1.72
CSB-PGBD3P0DP91 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC4.34□□□□□ -1.72
CSB-PGBD3P0DP91 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
CSB-PGBD3P0DP91 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms