Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 RNU6-655P-201ENST00000362858 107 ntBASIC2.99□□□□□ -1.93
SNRPA1P09661 RNU6-1026P-201ENST00000384465 108 ntBASIC2.99□□□□□ -1.93
SNRPA1P09661 RNU1-57P-201ENST00000384491 166 ntBASIC2.99□□□□□ -1.93
SNRPA1P09661 AC139712.2-201ENST00000424302 339 ntBASIC2.99□□□□□ -1.93
SNRPA1P09661 RPS12P2-201ENST00000439728 269 ntBASIC2.99□□□□□ -1.93
SNRPA1P09661 HSPE1P25-201ENST00000455484 251 ntBASIC2.99□□□□□ -1.93
SNRPA1P09661 AC007215.1-201ENST00000464893 276 ntBASIC2.99□□□□□ -1.93
SNRPA1P09661 AL121594.1-201ENST00000475906 575 ntBASIC2.99□□□□□ -1.93
SNRPA1P09661 SEM1P1-201ENST00000506694 209 ntBASIC2.99□□□□□ -1.93
SNRPA1P09661 RNU6-496P-201ENST00000516145 99 ntBASIC2.99□□□□□ -1.93
SNRPA1P09661 RRN3P3-201ENST00000549207 578 ntBASIC2.99□□□□□ -1.93
SNRPA1P09661 AC005520.5-201ENST00000613926 164 ntBASIC2.99□□□□□ -1.93
SNRPA1P09661 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.99□□□□□ -1.93
SNRPA1P09661 AL109809.4-201ENST00000603520 2185 ntBASIC2.99□□□□□ -1.93
SNRPA1P09661 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
SNRPA1P09661 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
SNRPA1P09661 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
SNRPA1P09661 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SNRPA1P09661 snoU2_19.1-201ENST00000362361 80 ntBASIC2.98□□□□□ -1.93
SNRPA1P09661 SNORD81.1-201ENST00000363064 77 ntBASIC2.98□□□□□ -1.93
SNRPA1P09661 RNU6-626P-201ENST00000363354 107 ntBASIC2.98□□□□□ -1.93
SNRPA1P09661 RNU6-1210P-201ENST00000363775 107 ntBASIC2.98□□□□□ -1.93
SNRPA1P09661 RNU1-91P-201ENST00000364746 163 ntBASIC2.98□□□□□ -1.93
SNRPA1P09661 Y_RNA.286-201ENST00000364813 102 ntBASIC2.98□□□□□ -1.93
SNRPA1P09661 RNU6-20P-201ENST00000384106 107 ntBASIC2.98□□□□□ -1.93
SNRPA1P09661 SNORD63-201ENST00000384262 68 ntBASIC2.98□□□□□ -1.93
SNRPA1P09661 Y_RNA.552-201ENST00000384665 112 ntBASIC2.98□□□□□ -1.93
SNRPA1P09661 Y_RNA.595-201ENST00000410403 105 ntBASIC2.98□□□□□ -1.93
SNRPA1P09661 AC018634.1-201ENST00000437554 401 ntBASIC2.98□□□□□ -1.93
SNRPA1P09661 MRPS36P2-201ENST00000512569 299 ntBASIC2.98□□□□□ -1.93
SNRPA1P09661 Y_RNA.683-201ENST00000516508 93 ntBASIC2.98□□□□□ -1.93
SNRPA1P09661 IGKV3-31-201ENST00000523109 329 ntBASIC2.98□□□□□ -1.93
SNRPA1P09661 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.98□□□□□ -1.93
SNRPA1P09661 AC079598.5-201ENST00000547460 117 ntBASIC2.98□□□□□ -1.93
SNRPA1P09661 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.98□□□□□ -1.93
SNRPA1P09661 uc_338.14-201ENST00000613162 166 ntBASIC2.98□□□□□ -1.93
SNRPA1P09661 PCGEM1.1-201ENST00000613431 131 ntBASIC2.98□□□□□ -1.93
SNRPA1P09661 UCA1.1-201ENST00000620952 75 ntBASIC2.98□□□□□ -1.93
SNRPA1P09661 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
SNRPA1P09661 BX322639.1-202ENST00000423987 2213 ntBASIC2.98□□□□□ -1.93
SNRPA1P09661 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.98□□□□□ -1.93
SNRPA1P09661 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.98□□□□□ -1.93
SNRPA1P09661 MTND5P35-201ENST00000557537 1720 ntBASIC2.97□□□□□ -1.93
SNRPA1P09661 RNU6-727P-201ENST00000363592 107 ntBASIC2.97□□□□□ -1.93
SNRPA1P09661 Y_RNA.179-201ENST00000363844 90 ntBASIC2.97□□□□□ -1.93
SNRPA1P09661 RNU6-1180P-201ENST00000364935 107 ntBASIC2.97□□□□□ -1.93
SNRPA1P09661 Y_RNA.416-201ENST00000384014 113 ntBASIC2.97□□□□□ -1.93
SNRPA1P09661 RNA5SP201-201ENST00000410316 124 ntBASIC2.97□□□□□ -1.93
SNRPA1P09661 AC073901.1-201ENST00000462471 408 ntBASIC2.97□□□□□ -1.93
SNRPA1P09661 AC091179.3-201ENST00000474761 144 ntBASIC2.97□□□□□ -1.93
SNRPA1P09661 AC145146.1-201ENST00000496370 254 ntBASIC2.97□□□□□ -1.93
SNRPA1P09661 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.97□□□□□ -1.93
SNRPA1P09661 SCARNA17.1-201ENST00000516211 143 ntBASIC2.97□□□□□ -1.93
SNRPA1P09661 SCARNA17.2-201ENST00000516334 143 ntBASIC2.97□□□□□ -1.93
SNRPA1P09661 RNU6-111P-201ENST00000517179 105 ntBASIC2.97□□□□□ -1.93
SNRPA1P09661 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.97□□□□□ -1.93
SNRPA1P09661 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.97□□□□□ -1.93
SNRPA1P09661 SCARNA17.4-201ENST00000614296 143 ntBASIC2.97□□□□□ -1.93
SNRPA1P09661 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.93
SNRPA1P09661 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.96□□□□□ -1.94
SNRPA1P09661 MIR21-201ENST00000362134 72 ntBASIC2.96□□□□□ -1.94
SNRPA1P09661 MIR335-201ENST00000362173 94 ntBASIC2.96□□□□□ -1.94
SNRPA1P09661 Y_RNA.54-201ENST00000362766 105 ntBASIC2.96□□□□□ -1.94
SNRPA1P09661 RNU6-290P-201ENST00000365212 101 ntBASIC2.96□□□□□ -1.94
SNRPA1P09661 Y_RNA.462-201ENST00000384268 102 ntBASIC2.96□□□□□ -1.94
SNRPA1P09661 MIR627-201ENST00000384979 97 ntBASIC2.96□□□□□ -1.94
SNRPA1P09661 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
SNRPA1P09661 AL603910.2-201ENST00000407268 136 ntBASIC2.96□□□□□ -1.94
SNRPA1P09661 MIR548H3-201ENST00000408771 118 ntBASIC2.96□□□□□ -1.94
SNRPA1P09661 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.96□□□□□ -1.94
SNRPA1P09661 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SNRPA1P09661 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.96□□□□□ -1.94
SNRPA1P09661 UBL5P3-201ENST00000475112 231 ntBASIC2.96□□□□□ -1.94
SNRPA1P09661 RPL31P41-201ENST00000477967 372 ntBASIC2.96□□□□□ -1.94
SNRPA1P09661 RNA5SP385-201ENST00000515947 110 ntBASIC2.96□□□□□ -1.94
SNRPA1P09661 RNU7-110P-201ENST00000516891 62 ntBASIC2.96□□□□□ -1.94
SNRPA1P09661 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.96□□□□□ -1.94
SNRPA1P09661 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.96□□□□□ -1.94
SNRPA1P09661 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
SNRPA1P09661 AL359854.1-201ENST00000614203 1594 ntBASIC2.95□□□□□ -1.94
SNRPA1P09661 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
SNRPA1P09661 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SNRPA1P09661 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.95□□□□□ -1.94
SNRPA1P09661 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SNRPA1P09661 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
SNRPA1P09661 RNU4-90P-201ENST00000362773 141 ntBASIC2.95□□□□□ -1.94
SNRPA1P09661 RNU6-793P-201ENST00000384233 104 ntBASIC2.95□□□□□ -1.94
SNRPA1P09661 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
SNRPA1P09661 SNORA46.1-201ENST00000391069 153 ntBASIC2.95□□□□□ -1.94
SNRPA1P09661 AC097463.2-201ENST00000421074 142 ntBASIC2.95□□□□□ -1.94
SNRPA1P09661 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.95□□□□□ -1.94
SNRPA1P09661 RPS15AP28-201ENST00000435088 386 ntBASIC2.95□□□□□ -1.94
SNRPA1P09661 Z98949.2-201ENST00000440996 144 ntBASIC2.95□□□□□ -1.94
SNRPA1P09661 UQCRBP2-201ENST00000447827 297 ntBASIC2.95□□□□□ -1.94
SNRPA1P09661 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.95□□□□□ -1.94
SNRPA1P09661 AC055872.1-201ENST00000570978 278 ntBASIC2.95□□□□□ -1.94
SNRPA1P09661 MIR4423-201ENST00000580922 80 ntBASIC2.95□□□□□ -1.94
SNRPA1P09661 MIR4765-201ENST00000585007 77 ntBASIC2.95□□□□□ -1.94
SNRPA1P09661 AC011373.1-201ENST00000607270 237 ntBASIC2.95□□□□□ -1.94
SNRPA1P09661 AL442067.1-201ENST00000613261 223 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 220.1 ms