Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AL355877.2-201ENST00000603670 358 ntBASIC2.47□□□□□ -2.01
HOXC6P09630 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.47□□□□□ -2.01
HOXC6P09630 SNORD98-201ENST00000636377 67 ntBASIC2.47□□□□□ -2.01
HOXC6P09630 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
HOXC6P09630 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
HOXC6P09630 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
HOXC6P09630 snoU2_19.2-201ENST00000363024 80 ntBASIC2.46□□□□□ -2.02
HOXC6P09630 Y_RNA.288-201ENST00000364854 92 ntBASIC2.46□□□□□ -2.02
HOXC6P09630 Y_RNA.447-201ENST00000384184 113 ntBASIC2.46□□□□□ -2.02
HOXC6P09630 RNU6-281P-201ENST00000384212 103 ntBASIC2.46□□□□□ -2.02
HOXC6P09630 Y_RNA.476-201ENST00000384347 108 ntBASIC2.46□□□□□ -2.02
HOXC6P09630 RNU6-748P-201ENST00000384648 107 ntBASIC2.46□□□□□ -2.02
HOXC6P09630 MT-TG-201ENST00000387429 68 ntBASIC2.46□□□□□ -2.02
HOXC6P09630 RNU6-159P-201ENST00000391080 106 ntBASIC2.46□□□□□ -2.02
HOXC6P09630 RNU6-1001P-201ENST00000411265 100 ntBASIC2.46□□□□□ -2.02
HOXC6P09630 RPS15AP7-201ENST00000439294 405 ntBASIC2.46□□□□□ -2.02
HOXC6P09630 RNU6-1132P-201ENST00000459214 107 ntBASIC2.46□□□□□ -2.02
HOXC6P09630 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.46□□□□□ -2.02
HOXC6P09630 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.46□□□□□ -2.02
HOXC6P09630 RNU6-388P-201ENST00000517012 105 ntBASIC2.46□□□□□ -2.02
HOXC6P09630 RNU6-389P-201ENST00000517048 105 ntBASIC2.46□□□□□ -2.02
HOXC6P09630 MIR2355-201ENST00000517199 87 ntBASIC2.46□□□□□ -2.02
HOXC6P09630 AC093023.1-201ENST00000547375 507 ntBASIC2.46□□□□□ -2.02
HOXC6P09630 AC021231.3-201ENST00000558497 370 ntBASIC2.46□□□□□ -2.02
HOXC6P09630 AL391813.1-201ENST00000603098 260 ntBASIC2.46□□□□□ -2.02
HOXC6P09630 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.46□□□□□ -2.02
HOXC6P09630 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.46□□□□□ -2.02
HOXC6P09630 AC010297.1-201ENST00000623948 149 ntBASIC2.46□□□□□ -2.02
HOXC6P09630 AC092268.1-201ENST00000342691 405 ntBASIC2.45□□□□□ -2.02
HOXC6P09630 RNU6-1159P-201ENST00000362933 107 ntBASIC2.45□□□□□ -2.02
HOXC6P09630 Y_RNA.84-201ENST00000363011 104 ntBASIC2.45□□□□□ -2.02
HOXC6P09630 RNU1-139P-201ENST00000391307 165 ntBASIC2.45□□□□□ -2.02
HOXC6P09630 RNU2-2P-201ENST00000410396 191 ntBASIC2.45□□□□□ -2.02
HOXC6P09630 SNORD12B-201ENST00000410433 91 ntBASIC2.45□□□□□ -2.02
HOXC6P09630 AL358075.3-201ENST00000426289 226 ntBASIC2.45□□□□□ -2.02
HOXC6P09630 SDAD1P3-201ENST00000427380 333 ntBASIC2.45□□□□□ -2.02
HOXC6P09630 SUMO1P4-201ENST00000429430 302 ntBASIC2.45□□□□□ -2.02
HOXC6P09630 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.45□□□□□ -2.02
HOXC6P09630 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.45□□□□□ -2.02
HOXC6P09630 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.45□□□□□ -2.02
HOXC6P09630 RNU6-1114P-201ENST00000516022 107 ntBASIC2.45□□□□□ -2.02
HOXC6P09630 RNU6-1143P-201ENST00000516125 104 ntBASIC2.45□□□□□ -2.02
HOXC6P09630 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.45□□□□□ -2.02
HOXC6P09630 AC016256.1-201ENST00000547971 354 ntBASIC2.45□□□□□ -2.02
HOXC6P09630 MIR3128-201ENST00000581957 66 ntBASIC2.45□□□□□ -2.02
HOXC6P09630 U2.15-201ENST00000611544 191 ntBASIC2.45□□□□□ -2.02
HOXC6P09630 U2.16-201ENST00000613119 191 ntBASIC2.45□□□□□ -2.02
HOXC6P09630 U2.12-201ENST00000613778 191 ntBASIC2.45□□□□□ -2.02
HOXC6P09630 U2.20-201ENST00000613956 192 ntBASIC2.45□□□□□ -2.02
HOXC6P09630 U2.9-201ENST00000615427 191 ntBASIC2.45□□□□□ -2.02
HOXC6P09630 U2.11-201ENST00000616345 191 ntBASIC2.45□□□□□ -2.02
HOXC6P09630 U2.2-201ENST00000616535 191 ntBASIC2.45□□□□□ -2.02
HOXC6P09630 U2.3-201ENST00000617785 191 ntBASIC2.45□□□□□ -2.02
HOXC6P09630 U2.19-201ENST00000618602 191 ntBASIC2.45□□□□□ -2.02
HOXC6P09630 RNU2-1-201ENST00000618664 191 ntBASIC2.45□□□□□ -2.02
HOXC6P09630 U2.6-201ENST00000619225 191 ntBASIC2.45□□□□□ -2.02
HOXC6P09630 U2.5-201ENST00000619465 191 ntBASIC2.45□□□□□ -2.02
HOXC6P09630 U2.10-201ENST00000620268 191 ntBASIC2.45□□□□□ -2.02
HOXC6P09630 UCA1.1-201ENST00000620952 75 ntBASIC2.45□□□□□ -2.02
HOXC6P09630 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.45□□□□□ -2.02
HOXC6P09630 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
HOXC6P09630 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
HOXC6P09630 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
HOXC6P09630 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.44□□□□□ -2.02
HOXC6P09630 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.44□□□□□ -2.02
HOXC6P09630 SNORD114-19-201ENST00000363072 75 ntBASIC2.44□□□□□ -2.02
HOXC6P09630 RNU6-378P-201ENST00000384324 107 ntBASIC2.44□□□□□ -2.02
HOXC6P09630 SNORD115-46-201ENST00000390982 71 ntBASIC2.44□□□□□ -2.02
HOXC6P09630 SNORA26.3-201ENST00000391119 136 ntBASIC2.44□□□□□ -2.02
HOXC6P09630 RNU6-1093P-201ENST00000391194 107 ntBASIC2.44□□□□□ -2.02
HOXC6P09630 RNA5SP181-201ENST00000410246 98 ntBASIC2.44□□□□□ -2.02
HOXC6P09630 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.44□□□□□ -2.02
HOXC6P09630 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.44□□□□□ -2.02
HOXC6P09630 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.44□□□□□ -2.02
HOXC6P09630 TRBVB-201ENST00000477100 408 ntBASIC2.44□□□□□ -2.02
HOXC6P09630 RPL23AP70-201ENST00000483361 460 ntBASIC2.44□□□□□ -2.02
HOXC6P09630 HMGB1P35-201ENST00000503360 598 ntBASIC2.44□□□□□ -2.02
HOXC6P09630 AC025465.3-201ENST00000510570 311 ntBASIC2.44□□□□□ -2.02
HOXC6P09630 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.44□□□□□ -2.02
HOXC6P09630 SNORA31.6-201ENST00000516241 130 ntBASIC2.44□□□□□ -2.02
HOXC6P09630 RNU2-53P-201ENST00000516257 147 ntBASIC2.44□□□□□ -2.02
HOXC6P09630 Y_RNA.676-201ENST00000516393 96 ntBASIC2.44□□□□□ -2.02
HOXC6P09630 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.44□□□□□ -2.02
HOXC6P09630 MIR4300-201ENST00000581016 96 ntBASIC2.44□□□□□ -2.02
HOXC6P09630 AC005357.1-201ENST00000588399 301 ntBASIC2.44□□□□□ -2.02
HOXC6P09630 MIR376A1-201ENST00000616574 68 ntBASIC2.44□□□□□ -2.02
HOXC6P09630 ZNF204P-201ENST00000416749 2397 ntBASIC2.44□□□□□ -2.02
HOXC6P09630 Y_RNA.14-201ENST00000362415 103 ntBASIC2.43□□□□□ -2.02
HOXC6P09630 Y_RNA.16-201ENST00000362421 102 ntBASIC2.43□□□□□ -2.02
HOXC6P09630 RNU6-873P-201ENST00000363833 107 ntBASIC2.43□□□□□ -2.02
HOXC6P09630 MIR627-201ENST00000384979 97 ntBASIC2.43□□□□□ -2.02
HOXC6P09630 MIR329-1-201ENST00000385028 80 ntBASIC2.43□□□□□ -2.02
HOXC6P09630 SNORD78.2-201ENST00000391076 69 ntBASIC2.43□□□□□ -2.02
HOXC6P09630 Y_RNA.602-201ENST00000410535 92 ntBASIC2.43□□□□□ -2.02
HOXC6P09630 AC096649.2-201ENST00000416186 393 ntBASIC2.43□□□□□ -2.02
HOXC6P09630 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.43□□□□□ -2.02
HOXC6P09630 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.43□□□□□ -2.02
HOXC6P09630 RPL31P41-201ENST00000477967 372 ntBASIC2.43□□□□□ -2.02
HOXC6P09630 Y_RNA.673-201ENST00000516306 88 ntBASIC2.43□□□□□ -2.02
HOXC6P09630 RN7SKP40-201ENST00000517211 242 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 542.7 ms