Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 RNU2-34P-201ENST00000516534 121 ntBASIC0.72□□□□□ -2.29
COL4A2P08572 RNU6-612P-201ENST00000516909 102 ntBASIC0.72□□□□□ -2.29
COL4A2P08572 MTND1P35-201ENST00000526739 508 ntBASIC0.72□□□□□ -2.29
COL4A2P08572 AC004812.1-201ENST00000540773 146 ntBASIC0.72□□□□□ -2.29
COL4A2P08572 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.72□□□□□ -2.29
COL4A2P08572 AP003465.2-201ENST00000602571 373 ntBASIC0.72□□□□□ -2.29
COL4A2P08572 MIR2909-201ENST00000617113 69 ntBASIC0.72□□□□□ -2.29
COL4A2P08572 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.72□□□□□ -2.29
COL4A2P08572 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.72□□□□□ -2.29
COL4A2P08572 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.72□□□□□ -2.29
COL4A2P08572 BX322639.1-202ENST00000423987 2213 ntBASIC0.72□□□□□ -2.29
COL4A2P08572 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.71□□□□□ -2.3
COL4A2P08572 Y_RNA.1-201ENST00000352915 104 ntBASIC0.71□□□□□ -2.3
COL4A2P08572 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
COL4A2P08572 RNU6-1329P-201ENST00000365664 107 ntBASIC0.71□□□□□ -2.3
COL4A2P08572 Y_RNA.381-201ENST00000365666 102 ntBASIC0.71□□□□□ -2.3
COL4A2P08572 RNU6-975P-201ENST00000384296 105 ntBASIC0.71□□□□□ -2.3
COL4A2P08572 RNU6-541P-201ENST00000384709 110 ntBASIC0.71□□□□□ -2.3
COL4A2P08572 RNY3P9-201ENST00000384727 106 ntBASIC0.71□□□□□ -2.3
COL4A2P08572 RNA5SP467-201ENST00000391274 118 ntBASIC0.71□□□□□ -2.3
COL4A2P08572 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
COL4A2P08572 MIR1253-201ENST00000408273 105 ntBASIC0.71□□□□□ -2.3
COL4A2P08572 RPS27P16-201ENST00000425758 201 ntBASIC0.71□□□□□ -2.3
COL4A2P08572 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.71□□□□□ -2.3
COL4A2P08572 MTCO2P19-201ENST00000427513 598 ntBASIC0.71□□□□□ -2.3
COL4A2P08572 CETN4P-201ENST00000432407 469 ntBASIC0.71□□□□□ -2.3
COL4A2P08572 AC245047.4-201ENST00000433189 144 ntBASIC0.71□□□□□ -2.3
COL4A2P08572 USP9YP28-201ENST00000435142 589 ntBASIC0.71□□□□□ -2.3
COL4A2P08572 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC0.71□□□□□ -2.3
COL4A2P08572 MTCO2P18-201ENST00000457151 658 ntBASIC0.71□□□□□ -2.3
COL4A2P08572 RNU7-57P-201ENST00000459540 60 ntBASIC0.71□□□□□ -2.3
COL4A2P08572 HMGN2P9-201ENST00000476875 229 ntBASIC0.71□□□□□ -2.3
COL4A2P08572 RPL39P5-202ENST00000512505 151 ntBASIC0.71□□□□□ -2.3
COL4A2P08572 RNU1-142P-201ENST00000516682 145 ntBASIC0.71□□□□□ -2.3
COL4A2P08572 AC017083.3-201ENST00000609955 700 ntBASIC0.71□□□□□ -2.3
COL4A2P08572 AC073114.1-201ENST00000612027 490 ntBASIC0.71□□□□□ -2.3
COL4A2P08572 AC103705.1-201ENST00000619013 241 ntBASIC0.71□□□□□ -2.3
COL4A2P08572 AC068792.1-201ENST00000621354 417 ntBASIC0.71□□□□□ -2.3
COL4A2P08572 AC124864.2-201ENST00000624736 186 ntBASIC0.71□□□□□ -2.3
COL4A2P08572 SNORA43.4-201ENST00000629559 138 ntBASIC0.71□□□□□ -2.3
COL4A2P08572 ELL2P3-201ENST00000457883 1602 ntBASIC0.71□□□□□ -2.3
COL4A2P08572 RNU1-76P-201ENST00000362903 159 ntBASIC0.7□□□□□ -2.3
COL4A2P08572 SNORA72.2-201ENST00000365028 127 ntBASIC0.7□□□□□ -2.3
COL4A2P08572 RNU6-348P-201ENST00000384386 107 ntBASIC0.7□□□□□ -2.3
COL4A2P08572 RNU6-1235P-201ENST00000384559 107 ntBASIC0.7□□□□□ -2.3
COL4A2P08572 MIR508-201ENST00000384857 115 ntBASIC0.7□□□□□ -2.3
COL4A2P08572 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
COL4A2P08572 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
COL4A2P08572 EIF1P1-201ENST00000421436 341 ntBASIC0.7□□□□□ -2.3
COL4A2P08572 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.7□□□□□ -2.3
COL4A2P08572 AC027119.1-201ENST00000440877 241 ntBASIC0.7□□□□□ -2.3
COL4A2P08572 AL353572.1-201ENST00000442490 417 ntBASIC0.7□□□□□ -2.3
COL4A2P08572 AC016717.1-201ENST00000448918 286 ntBASIC0.7□□□□□ -2.3
COL4A2P08572 AC073415.1-201ENST00000449240 153 ntBASIC0.7□□□□□ -2.3
COL4A2P08572 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.7□□□□□ -2.3
COL4A2P08572 OR2AQ1P-201ENST00000451972 200 ntBASIC0.7□□□□□ -2.3
COL4A2P08572 RNU7-180P-201ENST00000459240 63 ntBASIC0.7□□□□□ -2.3
COL4A2P08572 RNU6-498P-201ENST00000459468 107 ntBASIC0.7□□□□□ -2.3
COL4A2P08572 AC114982.1-201ENST00000469402 321 ntBASIC0.7□□□□□ -2.3
COL4A2P08572 AC103851.1-201ENST00000506833 274 ntBASIC0.7□□□□□ -2.3
COL4A2P08572 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.7□□□□□ -2.3
COL4A2P08572 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
COL4A2P08572 RNU6-351P-201ENST00000516097 100 ntBASIC0.7□□□□□ -2.3
COL4A2P08572 Y_RNA.695-201ENST00000516715 107 ntBASIC0.7□□□□□ -2.3
COL4A2P08572 SNORD60.2-201ENST00000516883 86 ntBASIC0.7□□□□□ -2.3
COL4A2P08572 RNU6-430P-201ENST00000517078 107 ntBASIC0.7□□□□□ -2.3
COL4A2P08572 SUMO2P16-201ENST00000519475 264 ntBASIC0.7□□□□□ -2.3
COL4A2P08572 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.7□□□□□ -2.3
COL4A2P08572 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.7□□□□□ -2.3
COL4A2P08572 AC013244.2-201ENST00000603396 103 ntBASIC0.7□□□□□ -2.3
COL4A2P08572 CTHRC1P1-201ENST00000605383 469 ntBASIC0.7□□□□□ -2.3
COL4A2P08572 MIR8076-201ENST00000611401 83 ntBASIC0.7□□□□□ -2.3
COL4A2P08572 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.7□□□□□ -2.3
COL4A2P08572 MIR302D-201ENST00000362275 68 ntBASIC0.69□□□□□ -2.3
COL4A2P08572 RNU6-439P-201ENST00000384188 106 ntBASIC0.69□□□□□ -2.3
COL4A2P08572 RNU6-1042P-201ENST00000384204 107 ntBASIC0.69□□□□□ -2.3
COL4A2P08572 RNU6-933P-201ENST00000384424 107 ntBASIC0.69□□□□□ -2.3
COL4A2P08572 SNORD37.1-201ENST00000390968 65 ntBASIC0.69□□□□□ -2.3
COL4A2P08572 AL117342.1-201ENST00000404861 406 ntBASIC0.69□□□□□ -2.3
COL4A2P08572 SNX2P2-201ENST00000424553 323 ntBASIC0.69□□□□□ -2.3
COL4A2P08572 AC004386.2-201ENST00000441858 148 ntBASIC0.69□□□□□ -2.3
COL4A2P08572 NFU1P2-201ENST00000448700 469 ntBASIC0.69□□□□□ -2.3
COL4A2P08572 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.69□□□□□ -2.3
COL4A2P08572 RNU6-956P-201ENST00000458868 103 ntBASIC0.69□□□□□ -2.3
COL4A2P08572 RPS3AP17-201ENST00000472594 777 ntBASIC0.69□□□□□ -2.3
COL4A2P08572 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.69□□□□□ -2.3
COL4A2P08572 AC104576.1-201ENST00000524225 88 ntBASIC0.69□□□□□ -2.3
COL4A2P08572 AP003034.1-201ENST00000534621 422 ntBASIC0.69□□□□□ -2.3
COL4A2P08572 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.69□□□□□ -2.3
COL4A2P08572 SCOCP1-201ENST00000554676 349 ntBASIC0.69□□□□□ -2.3
COL4A2P08572 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.69□□□□□ -2.3
COL4A2P08572 AC006362.1-201ENST00000567392 174 ntBASIC0.69□□□□□ -2.3
COL4A2P08572 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.69□□□□□ -2.3
COL4A2P08572 AC008088.1-201ENST00000580993 280 ntBASIC0.69□□□□□ -2.3
COL4A2P08572 MIR4424-201ENST00000585257 86 ntBASIC0.69□□□□□ -2.3
COL4A2P08572 AL627230.5-201ENST00000619807 58 ntBASIC0.69□□□□□ -2.3
COL4A2P08572 AC073534.2-201ENST00000620377 381 ntBASIC0.69□□□□□ -2.3
COL4A2P08572 AC006504.8-201ENST00000621046 635 ntBASIC0.69□□□□□ -2.3
COL4A2P08572 RNU5B-2P-201ENST00000363036 113 ntBASIC0.69□□□□□ -2.3
COL4A2P08572 RNU6-1240P-201ENST00000365155 104 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms