Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 RPL36AP48-201ENST00000485521 314 ntBASIC2.92□□□□□ -1.94
HLA-DOAP06340 RN7SL636P-201ENST00000497504 294 ntBASIC2.92□□□□□ -1.94
HLA-DOAP06340 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.92□□□□□ -1.94
HLA-DOAP06340 MRPS36P2-201ENST00000512569 299 ntBASIC2.92□□□□□ -1.94
HLA-DOAP06340 SCARNA17.1-201ENST00000516211 143 ntBASIC2.92□□□□□ -1.94
HLA-DOAP06340 SCARNA17.2-201ENST00000516334 143 ntBASIC2.92□□□□□ -1.94
HLA-DOAP06340 SNORD59.2-201ENST00000516873 68 ntBASIC2.92□□□□□ -1.94
HLA-DOAP06340 DEFB131C-201ENST00000528817 165 ntBASIC2.92□□□□□ -1.94
HLA-DOAP06340 AC018448.1-201ENST00000552843 316 ntBASIC2.92□□□□□ -1.94
HLA-DOAP06340 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.92□□□□□ -1.94
HLA-DOAP06340 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.92□□□□□ -1.94
HLA-DOAP06340 AC005176.2-201ENST00000596933 147 ntBASIC2.92□□□□□ -1.94
HLA-DOAP06340 AL034555.1-201ENST00000604816 211 ntBASIC2.92□□□□□ -1.94
HLA-DOAP06340 AC011921.3-201ENST00000605540 361 ntBASIC2.92□□□□□ -1.94
HLA-DOAP06340 AC099778.2-201ENST00000610904 211 ntBASIC2.92□□□□□ -1.94
HLA-DOAP06340 SCARNA17.4-201ENST00000614296 143 ntBASIC2.92□□□□□ -1.94
HLA-DOAP06340 XIST_intron.1-201ENST00000619444 68 ntBASIC2.92□□□□□ -1.94
HLA-DOAP06340 UCA1.1-201ENST00000620952 75 ntBASIC2.92□□□□□ -1.94
HLA-DOAP06340 MAPK10-322ENST00000641485 4530 ntBASIC2.92□□□□□ -1.94
HLA-DOAP06340 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HLA-DOAP06340 RNU1-105P-201ENST00000363470 161 ntBASIC2.91□□□□□ -1.94
HLA-DOAP06340 Y_RNA.179-201ENST00000363844 90 ntBASIC2.91□□□□□ -1.94
HLA-DOAP06340 RNU6-326P-201ENST00000365480 107 ntBASIC2.91□□□□□ -1.94
HLA-DOAP06340 RNU6-662P-201ENST00000384253 104 ntBASIC2.91□□□□□ -1.94
HLA-DOAP06340 RPS26P42-201ENST00000413485 326 ntBASIC2.91□□□□□ -1.94
HLA-DOAP06340 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.91□□□□□ -1.94
HLA-DOAP06340 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.91□□□□□ -1.94
HLA-DOAP06340 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.91□□□□□ -1.94
HLA-DOAP06340 Y_RNA.644-201ENST00000459006 113 ntBASIC2.91□□□□□ -1.94
HLA-DOAP06340 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.91□□□□□ -1.94
HLA-DOAP06340 RN7SL297P-201ENST00000483161 293 ntBASIC2.91□□□□□ -1.94
HLA-DOAP06340 RPL23AP70-201ENST00000483361 460 ntBASIC2.91□□□□□ -1.94
HLA-DOAP06340 AC091959.1-201ENST00000495857 238 ntBASIC2.91□□□□□ -1.94
HLA-DOAP06340 RNY3P16-201ENST00000516338 101 ntBASIC2.91□□□□□ -1.94
HLA-DOAP06340 Y_RNA.674-201ENST00000516362 113 ntBASIC2.91□□□□□ -1.94
HLA-DOAP06340 Y_RNA.683-201ENST00000516508 93 ntBASIC2.91□□□□□ -1.94
HLA-DOAP06340 RNA5SP54-201ENST00000516951 92 ntBASIC2.91□□□□□ -1.94
HLA-DOAP06340 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.91□□□□□ -1.94
HLA-DOAP06340 CYP4A27P-201ENST00000567218 190 ntBASIC2.91□□□□□ -1.94
HLA-DOAP06340 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.91□□□□□ -1.94
HLA-DOAP06340 AC004467.1-201ENST00000615678 330 ntBASIC2.91□□□□□ -1.94
HLA-DOAP06340 AC006001.4-201ENST00000622243 395 ntBASIC2.91□□□□□ -1.94
HLA-DOAP06340 AC091932.3-201ENST00000624223 323 ntBASIC2.91□□□□□ -1.94
HLA-DOAP06340 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.91□□□□□ -1.94
HLA-DOAP06340 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
HLA-DOAP06340 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.91□□□□□ -1.94
HLA-DOAP06340 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.9□□□□□ -1.95
HLA-DOAP06340 MIR411-201ENST00000362239 96 ntBASIC2.9□□□□□ -1.95
HLA-DOAP06340 RNU4-15P-201ENST00000362613 141 ntBASIC2.9□□□□□ -1.95
HLA-DOAP06340 Y_RNA.122-201ENST00000363331 96 ntBASIC2.9□□□□□ -1.95
HLA-DOAP06340 Y_RNA.415-201ENST00000384012 112 ntBASIC2.9□□□□□ -1.95
HLA-DOAP06340 RNU6-886P-201ENST00000384319 105 ntBASIC2.9□□□□□ -1.95
HLA-DOAP06340 Y_RNA.555-201ENST00000384673 110 ntBASIC2.9□□□□□ -1.95
HLA-DOAP06340 MIR186-201ENST00000384988 86 ntBASIC2.9□□□□□ -1.95
HLA-DOAP06340 Y_RNA.793-201ENST00000411222 111 ntBASIC2.9□□□□□ -1.95
HLA-DOAP06340 RNU4-61P-201ENST00000411243 107 ntBASIC2.9□□□□□ -1.95
HLA-DOAP06340 RNU6-1199P-201ENST00000411249 104 ntBASIC2.9□□□□□ -1.95
HLA-DOAP06340 Y_RNA.626-201ENST00000411288 95 ntBASIC2.9□□□□□ -1.95
HLA-DOAP06340 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.9□□□□□ -1.95
HLA-DOAP06340 UQCRBP2-201ENST00000447827 297 ntBASIC2.9□□□□□ -1.95
HLA-DOAP06340 RNU6-625P-201ENST00000459412 107 ntBASIC2.9□□□□□ -1.95
HLA-DOAP06340 AC007215.1-201ENST00000464893 276 ntBASIC2.9□□□□□ -1.95
HLA-DOAP06340 AC074198.2-201ENST00000508153 258 ntBASIC2.9□□□□□ -1.95
HLA-DOAP06340 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.9□□□□□ -1.95
HLA-DOAP06340 RNU6-1198P-201ENST00000516904 67 ntBASIC2.9□□□□□ -1.95
HLA-DOAP06340 AC115990.1-201ENST00000526957 301 ntBASIC2.9□□□□□ -1.95
HLA-DOAP06340 AC021269.2-201ENST00000532318 330 ntBASIC2.9□□□□□ -1.95
HLA-DOAP06340 CBX3P4-201ENST00000538909 354 ntBASIC2.9□□□□□ -1.95
HLA-DOAP06340 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.9□□□□□ -1.95
HLA-DOAP06340 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.9□□□□□ -1.95
HLA-DOAP06340 RNU6-91P-201ENST00000607774 107 ntBASIC2.9□□□□□ -1.95
HLA-DOAP06340 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.9□□□□□ -1.95
HLA-DOAP06340 BX322639.1-202ENST00000423987 2213 ntBASIC2.9□□□□□ -1.95
HLA-DOAP06340 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.89□□□□□ -1.95
HLA-DOAP06340 SNORA25.1-201ENST00000362326 128 ntBASIC2.89□□□□□ -1.95
HLA-DOAP06340 snoU2_19.1-201ENST00000362361 80 ntBASIC2.89□□□□□ -1.95
HLA-DOAP06340 RNU6-1010P-201ENST00000362757 107 ntBASIC2.89□□□□□ -1.95
HLA-DOAP06340 Y_RNA.270-201ENST00000364693 104 ntBASIC2.89□□□□□ -1.95
HLA-DOAP06340 Y_RNA.275-201ENST00000364726 110 ntBASIC2.89□□□□□ -1.95
HLA-DOAP06340 Y_RNA.292-201ENST00000364904 97 ntBASIC2.89□□□□□ -1.95
HLA-DOAP06340 RNY4P28-201ENST00000365281 93 ntBASIC2.89□□□□□ -1.95
HLA-DOAP06340 MIR592-201ENST00000384959 97 ntBASIC2.89□□□□□ -1.95
HLA-DOAP06340 RN7SKP51-201ENST00000410781 304 ntBASIC2.89□□□□□ -1.95
HLA-DOAP06340 COX6CP10-201ENST00000416832 224 ntBASIC2.89□□□□□ -1.95
HLA-DOAP06340 RAB28P5-201ENST00000427490 651 ntBASIC2.89□□□□□ -1.95
HLA-DOAP06340 POLR2KP2-201ENST00000438155 177 ntBASIC2.89□□□□□ -1.95
HLA-DOAP06340 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
HLA-DOAP06340 Y_RNA.700-201ENST00000516806 100 ntBASIC2.89□□□□□ -1.95
HLA-DOAP06340 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.89□□□□□ -1.95
HLA-DOAP06340 AC233702.2-202ENST00000562547 291 ntBASIC2.89□□□□□ -1.95
HLA-DOAP06340 AL162424.1-201ENST00000602325 221 ntBASIC2.89□□□□□ -1.95
HLA-DOAP06340 AC022441.3-201ENST00000605737 136 ntBASIC2.89□□□□□ -1.95
HLA-DOAP06340 PCGEM1.1-201ENST00000613431 131 ntBASIC2.89□□□□□ -1.95
HLA-DOAP06340 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.89□□□□□ -1.95
HLA-DOAP06340 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.89□□□□□ -1.95
HLA-DOAP06340 AL109809.4-201ENST00000603520 2185 ntBASIC2.88□□□□□ -1.95
HLA-DOAP06340 ZNF658B-202ENST00000615961 3375 ntBASIC2.88□□□□□ -1.95
HLA-DOAP06340 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
HLA-DOAP06340 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
HLA-DOAP06340 MIR410-201ENST00000362222 80 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 178.9 ms