Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 RNU6-487P-201ENST00000365430 104 ntBASIC3.22□□□□□ -1.89
CHGBP05060 RPS26P42-201ENST00000413485 326 ntBASIC3.22□□□□□ -1.89
CHGBP05060 RPL23AP58-201ENST00000440453 469 ntBASIC3.22□□□□□ -1.89
CHGBP05060 IFNA11P-201ENST00000446352 526 ntBASIC3.22□□□□□ -1.89
CHGBP05060 AL121594.1-201ENST00000475906 575 ntBASIC3.22□□□□□ -1.89
CHGBP05060 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.22□□□□□ -1.89
CHGBP05060 Y_RNA.662-201ENST00000516028 97 ntBASIC3.22□□□□□ -1.89
CHGBP05060 MIR3923-201ENST00000579521 83 ntBASIC3.22□□□□□ -1.89
CHGBP05060 RPS15AP11-201ENST00000594193 385 ntBASIC3.22□□□□□ -1.89
CHGBP05060 DEFB117-201ENST00000602356 141 ntBASIC3.22□□□□□ -1.89
CHGBP05060 AL034555.1-201ENST00000604816 211 ntBASIC3.22□□□□□ -1.89
CHGBP05060 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CHGBP05060 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
CHGBP05060 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.22□□□□□ -1.89
CHGBP05060 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
CHGBP05060 Y_RNA.136-201ENST00000363444 102 ntBASIC3.21□□□□□ -1.9
CHGBP05060 RNU5F-3P-201ENST00000363767 117 ntBASIC3.21□□□□□ -1.9
CHGBP05060 Y_RNA.415-201ENST00000384012 112 ntBASIC3.21□□□□□ -1.9
CHGBP05060 RNU6-125P-201ENST00000384505 107 ntBASIC3.21□□□□□ -1.9
CHGBP05060 MTCO2P33-201ENST00000402100 465 ntBASIC3.21□□□□□ -1.9
CHGBP05060 ELOCP21-201ENST00000412558 336 ntBASIC3.21□□□□□ -1.9
CHGBP05060 AC027124.2-201ENST00000428249 105 ntBASIC3.21□□□□□ -1.9
CHGBP05060 AL441985.1-201ENST00000457727 251 ntBASIC3.21□□□□□ -1.9
CHGBP05060 RNU7-23P-201ENST00000459465 62 ntBASIC3.21□□□□□ -1.9
CHGBP05060 COX6CP14-201ENST00000469580 174 ntBASIC3.21□□□□□ -1.9
CHGBP05060 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.21□□□□□ -1.9
CHGBP05060 Y_RNA.703-201ENST00000516846 111 ntBASIC3.21□□□□□ -1.9
CHGBP05060 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.21□□□□□ -1.9
CHGBP05060 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.21□□□□□ -1.9
CHGBP05060 AC007536.1-201ENST00000533382 349 ntBASIC3.21□□□□□ -1.9
CHGBP05060 MIR4282-201ENST00000583613 67 ntBASIC3.21□□□□□ -1.9
CHGBP05060 AC006023.1-201ENST00000603944 259 ntBASIC3.21□□□□□ -1.9
CHGBP05060 AC072026.1-201ENST00000605023 201 ntBASIC3.21□□□□□ -1.9
CHGBP05060 BX322639.1-202ENST00000423987 2213 ntBASIC3.21□□□□□ -1.9
CHGBP05060 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.21□□□□□ -1.9
CHGBP05060 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.21□□□□□ -1.9
CHGBP05060 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
CHGBP05060 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
CHGBP05060 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CHGBP05060 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
CHGBP05060 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.2□□□□□ -1.9
CHGBP05060 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.2□□□□□ -1.9
CHGBP05060 UBE2WP1-201ENST00000362030 340 ntBASIC3.2□□□□□ -1.9
CHGBP05060 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.2□□□□□ -1.9
CHGBP05060 MIR320B2-201ENST00000408479 138 ntBASIC3.2□□□□□ -1.9
CHGBP05060 RNA5SP475-201ENST00000410568 110 ntBASIC3.2□□□□□ -1.9
CHGBP05060 AC009963.1-201ENST00000417265 157 ntBASIC3.2□□□□□ -1.9
CHGBP05060 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.2□□□□□ -1.9
CHGBP05060 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.2□□□□□ -1.9
CHGBP05060 AC007215.1-201ENST00000464893 276 ntBASIC3.2□□□□□ -1.9
CHGBP05060 SRIP1-201ENST00000489235 288 ntBASIC3.2□□□□□ -1.9
CHGBP05060 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.2□□□□□ -1.9
CHGBP05060 AC074133.1-201ENST00000515696 183 ntBASIC3.2□□□□□ -1.9
CHGBP05060 RNA5SP76-201ENST00000516277 87 ntBASIC3.2□□□□□ -1.9
CHGBP05060 RN7SKP282-201ENST00000516824 299 ntBASIC3.2□□□□□ -1.9
CHGBP05060 AP002001.1-203ENST00000534002 267 ntBASIC3.2□□□□□ -1.9
CHGBP05060 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.2□□□□□ -1.9
CHGBP05060 AC027176.1-201ENST00000560204 514 ntBASIC3.2□□□□□ -1.9
CHGBP05060 MIR3910-1-201ENST00000580936 111 ntBASIC3.2□□□□□ -1.9
CHGBP05060 MIR3136-201ENST00000583498 78 ntBASIC3.2□□□□□ -1.9
CHGBP05060 MIR4635-201ENST00000583759 79 ntBASIC3.2□□□□□ -1.9
CHGBP05060 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.2□□□□□ -1.9
CHGBP05060 AC073349.3-201ENST00000617616 186 ntBASIC3.2□□□□□ -1.9
CHGBP05060 AC010889.1-201ENST00000566193 2666 ntBASIC3.2□□□□□ -1.9
CHGBP05060 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.2□□□□□ -1.9
CHGBP05060 AL109809.4-201ENST00000603520 2185 ntBASIC3.19□□□□□ -1.9
CHGBP05060 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.19□□□□□ -1.9
CHGBP05060 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CHGBP05060 MIR26A1-201ENST00000362205 77 ntBASIC3.19□□□□□ -1.9
CHGBP05060 RNU6-324P-201ENST00000363957 106 ntBASIC3.19□□□□□ -1.9
CHGBP05060 Y_RNA.233-201ENST00000364407 101 ntBASIC3.19□□□□□ -1.9
CHGBP05060 RNU6-918P-201ENST00000391219 106 ntBASIC3.19□□□□□ -1.9
CHGBP05060 MIR887-201ENST00000401258 79 ntBASIC3.19□□□□□ -1.9
CHGBP05060 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.19□□□□□ -1.9
CHGBP05060 AL392103.1-201ENST00000447000 198 ntBASIC3.19□□□□□ -1.9
CHGBP05060 AP001324.2-201ENST00000461163 319 ntBASIC3.19□□□□□ -1.9
CHGBP05060 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.19□□□□□ -1.9
CHGBP05060 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.19□□□□□ -1.9
CHGBP05060 RNU6-346P-201ENST00000516288 111 ntBASIC3.19□□□□□ -1.9
CHGBP05060 RNU6-191P-201ENST00000516295 94 ntBASIC3.19□□□□□ -1.9
CHGBP05060 RNU1-117P-201ENST00000517041 158 ntBASIC3.19□□□□□ -1.9
CHGBP05060 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CHGBP05060 MIR3605-201ENST00000583214 100 ntBASIC3.19□□□□□ -1.9
CHGBP05060 SNRPGP20-201ENST00000604477 205 ntBASIC3.19□□□□□ -1.9
CHGBP05060 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.19□□□□□ -1.9
CHGBP05060 snoU18.1-201ENST00000629629 71 ntBASIC3.19□□□□□ -1.9
CHGBP05060 MIR3674-201ENST00000636576 68 ntBASIC3.19□□□□□ -1.9
CHGBP05060 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.19□□□□□ -1.9
CHGBP05060 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CHGBP05060 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.18□□□□□ -1.9
CHGBP05060 SNORD114-19-201ENST00000363072 75 ntBASIC3.18□□□□□ -1.9
CHGBP05060 RNU1-105P-201ENST00000363470 161 ntBASIC3.18□□□□□ -1.9
CHGBP05060 SNORD87-201ENST00000364849 89 ntBASIC3.18□□□□□ -1.9
CHGBP05060 RNU6-245P-201ENST00000384020 107 ntBASIC3.18□□□□□ -1.9
CHGBP05060 RNU6-804P-201ENST00000384286 107 ntBASIC3.18□□□□□ -1.9
CHGBP05060 RNU6-748P-201ENST00000384648 107 ntBASIC3.18□□□□□ -1.9
CHGBP05060 MIR634-201ENST00000385208 97 ntBASIC3.18□□□□□ -1.9
CHGBP05060 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.18□□□□□ -1.9
CHGBP05060 BTF3P11-201ENST00000426582 477 ntBASIC3.18□□□□□ -1.9
CHGBP05060 AC009414.1-201ENST00000427200 443 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms