Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 CPDP1-201ENST00000579660 283 ntBASIC0.71□□□□□ -2.3
COL4A1P02462 SNRPGP20-201ENST00000604477 205 ntBASIC0.71□□□□□ -2.3
COL4A1P02462 AL357078.3-201ENST00000607528 618 ntBASIC0.71□□□□□ -2.3
COL4A1P02462 TCL6_2.1-201ENST00000615162 119 ntBASIC0.71□□□□□ -2.3
COL4A1P02462 AL590240.4-201ENST00000616908 390 ntBASIC0.71□□□□□ -2.3
COL4A1P02462 uc_338.34-201ENST00000617467 174 ntBASIC0.71□□□□□ -2.3
COL4A1P02462 AC103705.1-201ENST00000619013 241 ntBASIC0.71□□□□□ -2.3
COL4A1P02462 AC073534.2-201ENST00000620377 381 ntBASIC0.71□□□□□ -2.3
COL4A1P02462 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.71□□□□□ -2.3
COL4A1P02462 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
COL4A1P02462 Y_RNA.60-201ENST00000362831 98 ntBASIC0.7□□□□□ -2.3
COL4A1P02462 RNU6-254P-201ENST00000363377 107 ntBASIC0.7□□□□□ -2.3
COL4A1P02462 Y_RNA.151-201ENST00000363566 112 ntBASIC0.7□□□□□ -2.3
COL4A1P02462 Y_RNA.194-201ENST00000363985 102 ntBASIC0.7□□□□□ -2.3
COL4A1P02462 Y_RNA.359-201ENST00000365498 102 ntBASIC0.7□□□□□ -2.3
COL4A1P02462 Y_RNA.373-201ENST00000365600 103 ntBASIC0.7□□□□□ -2.3
COL4A1P02462 RNU6-1329P-201ENST00000365664 107 ntBASIC0.7□□□□□ -2.3
COL4A1P02462 MIR30A-201ENST00000385092 71 ntBASIC0.7□□□□□ -2.3
COL4A1P02462 MIR450B-201ENST00000401182 78 ntBASIC0.7□□□□□ -2.3
COL4A1P02462 AL590002.1-201ENST00000406554 418 ntBASIC0.7□□□□□ -2.3
COL4A1P02462 CETN4P-201ENST00000432407 469 ntBASIC0.7□□□□□ -2.3
COL4A1P02462 MTCO2P16-201ENST00000436962 677 ntBASIC0.7□□□□□ -2.3
COL4A1P02462 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.7□□□□□ -2.3
COL4A1P02462 MTCO2P18-201ENST00000457151 658 ntBASIC0.7□□□□□ -2.3
COL4A1P02462 RNU7-180P-201ENST00000459240 63 ntBASIC0.7□□□□□ -2.3
COL4A1P02462 U8.21-201ENST00000459536 136 ntBASIC0.7□□□□□ -2.3
COL4A1P02462 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.7□□□□□ -2.3
COL4A1P02462 HMGN1P13-201ENST00000505795 138 ntBASIC0.7□□□□□ -2.3
COL4A1P02462 AC097473.1-201ENST00000508142 408 ntBASIC0.7□□□□□ -2.3
COL4A1P02462 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.7□□□□□ -2.3
COL4A1P02462 AC091874.1-201ENST00000511402 339 ntBASIC0.7□□□□□ -2.3
COL4A1P02462 RNU6-189P-201ENST00000516120 101 ntBASIC0.7□□□□□ -2.3
COL4A1P02462 RNU6-948P-201ENST00000516374 107 ntBASIC0.7□□□□□ -2.3
COL4A1P02462 RNU6-314P-201ENST00000516574 104 ntBASIC0.7□□□□□ -2.3
COL4A1P02462 RNU6-1332P-201ENST00000516666 104 ntBASIC0.7□□□□□ -2.3
COL4A1P02462 MTND1P35-201ENST00000526739 508 ntBASIC0.7□□□□□ -2.3
COL4A1P02462 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.7□□□□□ -2.3
COL4A1P02462 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC0.7□□□□□ -2.3
COL4A1P02462 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.7□□□□□ -2.3
COL4A1P02462 AC006504.8-201ENST00000621046 635 ntBASIC0.7□□□□□ -2.3
COL4A1P02462 MTND5P26-201ENST00000426018 1752 ntBASIC0.69□□□□□ -2.3
COL4A1P02462 MIR340-201ENST00000362125 95 ntBASIC0.69□□□□□ -2.3
COL4A1P02462 RNU6-227P-201ENST00000362865 103 ntBASIC0.69□□□□□ -2.3
COL4A1P02462 RNA5SP331-201ENST00000364986 107 ntBASIC0.69□□□□□ -2.3
COL4A1P02462 SNORA69-201ENST00000383895 132 ntBASIC0.69□□□□□ -2.3
COL4A1P02462 RNU6-483P-201ENST00000384088 108 ntBASIC0.69□□□□□ -2.3
COL4A1P02462 RNU6-784P-201ENST00000384330 106 ntBASIC0.69□□□□□ -2.3
COL4A1P02462 MIR146A-201ENST00000385201 99 ntBASIC0.69□□□□□ -2.3
COL4A1P02462 Y_RNA.582-201ENST00000391023 95 ntBASIC0.69□□□□□ -2.3
COL4A1P02462 CALM2P3-201ENST00000400429 449 ntBASIC0.69□□□□□ -2.3
COL4A1P02462 RNU6-1068P-201ENST00000410958 103 ntBASIC0.69□□□□□ -2.3
COL4A1P02462 AL117339.3-201ENST00000418733 162 ntBASIC0.69□□□□□ -2.3
COL4A1P02462 ARL5AP1-201ENST00000418991 388 ntBASIC0.69□□□□□ -2.3
COL4A1P02462 CST2P1-201ENST00000425770 87 ntBASIC0.69□□□□□ -2.3
COL4A1P02462 MTND3P9-201ENST00000429526 346 ntBASIC0.69□□□□□ -2.3
COL4A1P02462 MTCO1P44-201ENST00000441935 243 ntBASIC0.69□□□□□ -2.3
COL4A1P02462 AL353572.1-201ENST00000442490 417 ntBASIC0.69□□□□□ -2.3
COL4A1P02462 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.69□□□□□ -2.3
COL4A1P02462 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.69□□□□□ -2.3
COL4A1P02462 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.69□□□□□ -2.3
COL4A1P02462 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0.69□□□□□ -2.3
COL4A1P02462 AC079140.2-201ENST00000506193 142 ntBASIC0.69□□□□□ -2.3
COL4A1P02462 RNU6-567P-201ENST00000516746 107 ntBASIC0.69□□□□□ -2.3
COL4A1P02462 RNA5SP54-201ENST00000516951 92 ntBASIC0.69□□□□□ -2.3
COL4A1P02462 AC104576.1-201ENST00000524225 88 ntBASIC0.69□□□□□ -2.3
COL4A1P02462 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.69□□□□□ -2.3
COL4A1P02462 AC016256.1-201ENST00000547971 354 ntBASIC0.69□□□□□ -2.3
COL4A1P02462 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.69□□□□□ -2.3
COL4A1P02462 MIR5006-201ENST00000583027 110 ntBASIC0.69□□□□□ -2.3
COL4A1P02462 Z98751.3-201ENST00000604447 521 ntBASIC0.69□□□□□ -2.3
COL4A1P02462 AC004492.1-201ENST00000607036 742 ntBASIC0.69□□□□□ -2.3
COL4A1P02462 AL078604.3-201ENST00000615580 211 ntBASIC0.69□□□□□ -2.3
COL4A1P02462 AL136221.1-201ENST00000621449 509 ntBASIC0.69□□□□□ -2.3
COL4A1P02462 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.69□□□□□ -2.3
COL4A1P02462 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
COL4A1P02462 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
COL4A1P02462 RNU6-271P-201ENST00000363858 105 ntBASIC0.69□□□□□ -2.3
COL4A1P02462 SNORA36A-201ENST00000384221 132 ntBASIC0.69□□□□□ -2.3
COL4A1P02462 SNORA26.3-201ENST00000391119 136 ntBASIC0.69□□□□□ -2.3
COL4A1P02462 RNA5SP467-201ENST00000391274 118 ntBASIC0.69□□□□□ -2.3
COL4A1P02462 RPL21P111-201ENST00000418453 477 ntBASIC0.69□□□□□ -2.3
COL4A1P02462 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.69□□□□□ -2.3
COL4A1P02462 AC073910.1-201ENST00000445047 438 ntBASIC0.69□□□□□ -2.3
COL4A1P02462 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.69□□□□□ -2.3
COL4A1P02462 AC112492.4-201ENST00000456549 352 ntBASIC0.69□□□□□ -2.3
COL4A1P02462 snoU13.30-201ENST00000458951 104 ntBASIC0.69□□□□□ -2.3
COL4A1P02462 AC007215.1-201ENST00000464893 276 ntBASIC0.69□□□□□ -2.3
COL4A1P02462 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC0.69□□□□□ -2.3
COL4A1P02462 AC083904.1-201ENST00000487828 231 ntBASIC0.69□□□□□ -2.3
COL4A1P02462 AL163195.1-201ENST00000496941 348 ntBASIC0.69□□□□□ -2.3
COL4A1P02462 HMGB1P29-201ENST00000505659 499 ntBASIC0.69□□□□□ -2.3
COL4A1P02462 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.69□□□□□ -2.3
COL4A1P02462 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.69□□□□□ -2.3
COL4A1P02462 RNU6-1146P-201ENST00000516282 102 ntBASIC0.69□□□□□ -2.3
COL4A1P02462 RNU6-1198P-201ENST00000516904 67 ntBASIC0.69□□□□□ -2.3
COL4A1P02462 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.69□□□□□ -2.3
COL4A1P02462 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.69□□□□□ -2.3
COL4A1P02462 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.69□□□□□ -2.3
COL4A1P02462 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.69□□□□□ -2.3
COL4A1P02462 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms