Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 RNU6-1093P-201ENST00000391194 107 ntBASIC1.95□□□□□ -2.1
CLDN1O95832 Y_RNA.597-201ENST00000410463 100 ntBASIC1.95□□□□□ -2.1
CLDN1O95832 RNU2-48P-201ENST00000410694 191 ntBASIC1.95□□□□□ -2.1
CLDN1O95832 RNU2-63P-201ENST00000410792 194 ntBASIC1.95□□□□□ -2.1
CLDN1O95832 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.95□□□□□ -2.1
CLDN1O95832 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.95□□□□□ -2.1
CLDN1O95832 U8.22-201ENST00000459141 133 ntBASIC1.95□□□□□ -2.1
CLDN1O95832 Y_RNA.661-201ENST00000516003 99 ntBASIC1.95□□□□□ -2.1
CLDN1O95832 RNU6-988P-201ENST00000519081 107 ntBASIC1.95□□□□□ -2.1
CLDN1O95832 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.95□□□□□ -2.1
CLDN1O95832 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.95□□□□□ -2.1
CLDN1O95832 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.95□□□□□ -2.1
CLDN1O95832 MIR5694-201ENST00000581190 76 ntBASIC1.95□□□□□ -2.1
CLDN1O95832 AC125232.2-201ENST00000592457 143 ntBASIC1.95□□□□□ -2.1
CLDN1O95832 VN1R91P-201ENST00000594377 169 ntBASIC1.95□□□□□ -2.1
CLDN1O95832 SNORD14A-201ENST00000606526 91 ntBASIC1.95□□□□□ -2.1
CLDN1O95832 Y_RNA.812-201ENST00000610788 101 ntBASIC1.95□□□□□ -2.1
CLDN1O95832 Y_RNA.784-201ENST00000613803 101 ntBASIC1.95□□□□□ -2.1
CLDN1O95832 AC083806.3-201ENST00000614016 455 ntBASIC1.95□□□□□ -2.1
CLDN1O95832 Y_RNA.787-201ENST00000616522 101 ntBASIC1.95□□□□□ -2.1
CLDN1O95832 Y_RNA.780-201ENST00000617336 101 ntBASIC1.95□□□□□ -2.1
CLDN1O95832 Y_RNA.801-201ENST00000619005 101 ntBASIC1.95□□□□□ -2.1
CLDN1O95832 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.95□□□□□ -2.1
CLDN1O95832 AC090517.3-201ENST00000625170 141 ntBASIC1.95□□□□□ -2.1
CLDN1O95832 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.95□□□□□ -2.1
CLDN1O95832 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
CLDN1O95832 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CLDN1O95832 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CLDN1O95832 AC005336.3-201ENST00000623833 2679 ntBASIC1.94□□□□□ -2.1
CLDN1O95832 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
CLDN1O95832 MIR337-201ENST00000362281 93 ntBASIC1.94□□□□□ -2.1
CLDN1O95832 Y_RNA.202-201ENST00000364083 110 ntBASIC1.94□□□□□ -2.1
CLDN1O95832 AC117470.1-201ENST00000381974 330 ntBASIC1.94□□□□□ -2.1
CLDN1O95832 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
CLDN1O95832 AC004866.1-201ENST00000411748 78 ntBASIC1.94□□□□□ -2.1
CLDN1O95832 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.94□□□□□ -2.1
CLDN1O95832 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.94□□□□□ -2.1
CLDN1O95832 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.94□□□□□ -2.1
CLDN1O95832 AC107032.1-201ENST00000485945 480 ntBASIC1.94□□□□□ -2.1
CLDN1O95832 AC018868.1-201ENST00000491307 315 ntBASIC1.94□□□□□ -2.1
CLDN1O95832 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.94□□□□□ -2.1
CLDN1O95832 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.94□□□□□ -2.1
CLDN1O95832 SNORA25.10-201ENST00000515926 124 ntBASIC1.94□□□□□ -2.1
CLDN1O95832 ANP32BP3-201ENST00000559213 706 ntBASIC1.94□□□□□ -2.1
CLDN1O95832 AL353621.2-201ENST00000605340 133 ntBASIC1.94□□□□□ -2.1
CLDN1O95832 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.94□□□□□ -2.1
CLDN1O95832 AC006157.1-201ENST00000611750 366 ntBASIC1.94□□□□□ -2.1
CLDN1O95832 AC005562.2-201ENST00000618264 111 ntBASIC1.94□□□□□ -2.1
CLDN1O95832 U2.1-201ENST00000618978 145 ntBASIC1.94□□□□□ -2.1
CLDN1O95832 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.94□□□□□ -2.1
CLDN1O95832 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.94□□□□□ -2.1
CLDN1O95832 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
CLDN1O95832 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
CLDN1O95832 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CLDN1O95832 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
CLDN1O95832 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.93□□□□□ -2.1
CLDN1O95832 RNU5F-3P-201ENST00000363767 117 ntBASIC1.93□□□□□ -2.1
CLDN1O95832 RNU6-873P-201ENST00000363833 107 ntBASIC1.93□□□□□ -2.1
CLDN1O95832 RNY3P11-201ENST00000364153 102 ntBASIC1.93□□□□□ -2.1
CLDN1O95832 Y_RNA.358-201ENST00000365491 99 ntBASIC1.93□□□□□ -2.1
CLDN1O95832 RNU6-281P-201ENST00000384212 103 ntBASIC1.93□□□□□ -2.1
CLDN1O95832 RNY3P4-201ENST00000384428 101 ntBASIC1.93□□□□□ -2.1
CLDN1O95832 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
CLDN1O95832 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.93□□□□□ -2.1
CLDN1O95832 AC093852.1-201ENST00000503587 266 ntBASIC1.93□□□□□ -2.1
CLDN1O95832 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.93□□□□□ -2.1
CLDN1O95832 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.93□□□□□ -2.1
CLDN1O95832 AC022616.8-201ENST00000533569 253 ntBASIC1.93□□□□□ -2.1
CLDN1O95832 AL442163.3-201ENST00000554110 156 ntBASIC1.93□□□□□ -2.1
CLDN1O95832 UBL5P4-201ENST00000562584 236 ntBASIC1.93□□□□□ -2.1
CLDN1O95832 AC009127.3-201ENST00000570531 403 ntBASIC1.93□□□□□ -2.1
CLDN1O95832 MIR5188-201ENST00000583467 113 ntBASIC1.93□□□□□ -2.1
CLDN1O95832 MIR6840-201ENST00000611937 71 ntBASIC1.93□□□□□ -2.1
CLDN1O95832 TCL6_2.1-201ENST00000615162 119 ntBASIC1.93□□□□□ -2.1
CLDN1O95832 AL132822.1-201ENST00000617063 513 ntBASIC1.93□□□□□ -2.1
CLDN1O95832 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.92□□□□□ -2.1
CLDN1O95832 AC005592.1-201ENST00000566527 1640 ntBASIC1.92□□□□□ -2.1
CLDN1O95832 ZNF204P-201ENST00000416749 2397 ntBASIC1.92□□□□□ -2.1
CLDN1O95832 MIR378A-201ENST00000362177 66 ntBASIC1.92□□□□□ -2.1
CLDN1O95832 RNU6-1301P-201ENST00000362724 104 ntBASIC1.92□□□□□ -2.1
CLDN1O95832 Y_RNA.158-201ENST00000363651 101 ntBASIC1.92□□□□□ -2.1
CLDN1O95832 SNORA3A-201ENST00000364113 130 ntBASIC1.92□□□□□ -2.1
CLDN1O95832 RNU6-280P-201ENST00000364145 104 ntBASIC1.92□□□□□ -2.1
CLDN1O95832 Y_RNA.645-201ENST00000391229 102 ntBASIC1.92□□□□□ -2.1
CLDN1O95832 MRPL42P3-201ENST00000401492 326 ntBASIC1.92□□□□□ -2.1
CLDN1O95832 AC009237.7-201ENST00000447357 229 ntBASIC1.92□□□□□ -2.1
CLDN1O95832 AC007395.1-201ENST00000451333 677 ntBASIC1.92□□□□□ -2.1
CLDN1O95832 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.92□□□□□ -2.1
CLDN1O95832 RNU6-344P-201ENST00000516635 111 ntBASIC1.92□□□□□ -2.1
CLDN1O95832 AC091144.1-201ENST00000519573 138 ntBASIC1.92□□□□□ -2.1
CLDN1O95832 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.92□□□□□ -2.1
CLDN1O95832 CBX3P7-201ENST00000532876 502 ntBASIC1.92□□□□□ -2.1
CLDN1O95832 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.92□□□□□ -2.1
CLDN1O95832 AC090517.1-201ENST00000569307 266 ntBASIC1.92□□□□□ -2.1
CLDN1O95832 AC006600.1-201ENST00000572529 153 ntBASIC1.92□□□□□ -2.1
CLDN1O95832 SNRPGP20-201ENST00000604477 205 ntBASIC1.92□□□□□ -2.1
CLDN1O95832 AC016925.2-201ENST00000605108 242 ntBASIC1.92□□□□□ -2.1
CLDN1O95832 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.92□□□□□ -2.1
CLDN1O95832 AC008873.1-201ENST00000625051 138 ntBASIC1.92□□□□□ -2.1
CLDN1O95832 MIR203B-201ENST00000636080 86 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms